Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 203 3e-47
seq5177 96.9 3e-15
seq218964 82.4 7e-11
seq117972 82.4 7e-11
>seq21365
Length=2821
Score = 203 bits (224), Expect = 3e-47
Identities = 348/500 (70%), Gaps = 4/500 (1%)
Strand=Plus/Minus
Query 24794 GTGGCGGCGTACTTTGTCGAGTGGGGTGTGTACCCGCGCCAGTTTCCCGTCGACAAGGTG 24853
|||| || ||||| || || |||||||| ||||| | | || ||||| || |
Sbjct 1324 GTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTATA 1265
Query 24854 CCCGCGCCCAACCTCTCGCACTTGCTCTACGGCTTTGTGCCCATCTGCGGCGGCGCGGGC 24913
|| || || || | || |||||||| |||||| | ||||| |||||||| | |||
Sbjct 1264 CCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGC 1205
Query 24914 ATCAACGATGCGCTAAAAACTGTGCCG-GGCAGCTTCGAGGCGCTGCAACGATCGTGCGC 24972
|| || ||| ||| |||| | | ||||| ||| | || |||||||| || ||
Sbjct 1204 ATAAATGATA-GCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAG 1146
Query 24973 CGGCCGCGCCGACTTCAAGGTGGCCATCCACGATCCGTGGGCGGCCATACAGAAACCGCA 25032
|||||| | |||||||| || | ||||||||||| ||||| || |||| ||||| ||
Sbjct 1145 CGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACA 1086
Query 25033 GAAAGGCGTGTCCGCGTGGAACGAGCCGTACAAGGGCAACTTTGGCCAGCTGATGGCGCT 25092
||||| |||| | ||||||||||| ||||| |||||||||||||| | ||| | ||
Sbjct 1085 AAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACT 1026
Query 25093 GAAGCGCGCCTACCCGCACCTCAAAGTGCTGCCCTCGATCGGCGGCTGGACGCTGTCCGA 25152
|| | ||| ||| | | || | || |||||||| || || |||||||| ||||
Sbjct 1025 AAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGA 966
Query 25153 CCCGTTCTTCCACATGCACGACAAGGCGGCGCGCCAGACG-TTTATCGACTCGGTGCAAG 25211
|| |||||| | ||||| | | | ||| ||| | | || || | |
Sbjct 965 TCCTTTCTTCTTTTTAGTTGACAAATCTAAAAG-AACACGATTTGTGCAGTCAGTAAAGG 907
Query 25212 AGTACCTCGTCACCTGGAAGTTCTTTGACGGCGTCGACCTCGATTGGGAGTTTCCCGGCG 25271
||| ||| | || ||||| ||||| || || || || |||||||||||||||| || |
Sbjct 906 AGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTG 847
Query 25272 GCAAGGGCGCCAACCCGGAC 25291
| || || || ||||| |||
Sbjct 846 GTAAAGGTGCTAACCCTGAC 827
>seq5177
Length=4331
Score = 96.9 bits (106), Expect = 3e-15
Identities = 437/685 (64%), Gaps = 16/685 (2%)
Strand=Plus/Minus
Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370
||||| |||||||| || || ||||||| | ||| || || || | || || |||||
Sbjct 3367 GTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 3308
Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430
|||| || || || || |||||||| | ||| ||| || || || | |||
Sbjct 3307 GGTGCTATCAATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCC 3248
Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490
|||||||| || | || || ||||||||| || ||||| || || || |||||
Sbjct 3247 CAGTCCCAAAGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTA 3188
Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550
|| || || || | || | |||||| | || | | || | ||| || || ||
Sbjct 3187 GCTGGACTTCCTTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCT 3128
Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610
|| | || || || ||||| || || ||||| || || || || |||
Sbjct 3127 TCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCA 3068
Query 148611 CTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCA 148670
|||||||| || || | || | |||||| | || || | ||||| || || | ||
Sbjct 3067 CTTTCGTAAGGTATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCG 3008
Query 148671 ATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC---GAGCGGATAGTGGTTGCGG 148727
|| || ||||| | || || || | ||| || || ||||| |||
Sbjct 3007 ATAGGACGGTGCCTCATATT--TGAAGTTTTTGCT-TCAGGGACAGGATAAAAGTTAACA 2951
Query 148728 TCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGT-AATTCTGCGCA----GCAATT 148782
|| |||| |||| | ||| | ||| | ||| || | |||| | ||
Sbjct 2950 TCAATGACTTTGTTTAAATTTTGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAA 2891
Query 148783 CAAAATCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACA 148842
| |||||| || | || || | ||| ||| | || || || || || |||||||
Sbjct 2890 CTAAATCG--ATTATTTTCAAC-AAACAT--GTTAAGTGCTATGGAAGCAAGGTTGCACA 2836
Query 148843 CGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGA 148902
| ||| ||||| | |||| | || | ||| | ||| |||||||| ||||| |
Sbjct 2835 CTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAA 2776
Query 148903 TCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACG 148962
| ||| | || |||||||| ||||| |||||||| || ||||| |||| ||| || |
Sbjct 2775 TAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTGCAAGCATCCTTATACAACATATATG 2716
Query 148963 GTCCGCCAGTTTCCACCTGCGTTTC 148987
|| ||||| ||||| || | |||
Sbjct 2715 GTGTACCAGTCTCCACTTGAGCTTC 2691
>seq218964
Length=932
Score = 82.4 bits (90), Expect = 7e-11
Identities = 108/147 (73%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || ||| |||| | || || || || ||||| |||||||||||||| |||
Sbjct 785 TGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT-TGAAT 727
Query 133575 TTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| |||| | | |||| ||||||| || || || || | || | |||||| ||
Sbjct 726 TTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTACC 667
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||||||||||||
Sbjct 666 CGTGAGTGTTTTCACGAAAATCTGCAT 640
>seq117972
Length=685
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || || ||||| || || ||||||||| | ||| ||| | || || |
Sbjct 67 AAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCA-TCTTCCAA 125
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || || | || || |||||||| || || |||||||| || ||||| |||
Sbjct 126 TTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGAT 185
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| | | |||| || || | ||| ||||| || | || | ||| || |
Sbjct 186 -TTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTTC 244
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || || ||||| || |||||||||||
Sbjct 245 CAGTTAGGGTTTTAACAAAAATCTGCAT 272
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/208 (69%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512
||||| | || || ||||| || || ||||| || | ||| |||| || || |
Sbjct 295 AAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAA--GTGTACGACCATCTTCCA 352
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||||| |||| || || || || || ||||| |||||||| ||||| ||
Sbjct 353 ATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGA 412
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
| || ||| | | |||| ||||| | || || || || | || | |||||||
Sbjct 413 TTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTGC 472
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || || ||||| || ||||| |||||
Sbjct 473 CAGTAAGTGTTTTAACAAAAATTTGCAT 500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481470354183760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |