Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5177 185 2e-41 seq54952 120 7e-22 >seq5177 Length=4331 Score = 185 bits (204), Expect = 2e-41 Identities = 429/641 (67%), Gaps = 7/641 (1%) Strand=Plus/Plus Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579 || ||||| ||| ||| || || || ||| ||||||||||||| ||| || | ||| Sbjct 2157 TCCTGCTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATTTTCGATACTTTAAAA 2216 Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGC 110639 || ||| | ||||||||| | || || || ||| | || ||| ||| | Sbjct 2217 CAATGTGCATTAATTTCTAAATCTGCCGGTGGCATAGGTTTACATACACATTGCATTAGA 2276 Query 110640 TCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTA 110699 | | || | |||| || | || || | ||| | ||| || || |||||||| Sbjct 2277 GCCCAGGGGTCTTATATAGCTGGCACTAATGGGGTTTCGAATGGTCTAGTGCCAATGTTG 2336 Query 110700 AGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCA 110756 ||||| | |||| | ||||| | |||||| |||||||||| || | | | || || Sbjct 2337 AGAGTGTACAACAATACTGCCAGATATGTAGATCAAGGTGGAAACAAACGTCCCGGTGCA 2396 Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 ||||| || || | || ||||||||| | || |||||||| |||||||| || ||| Sbjct 2397 TTTGCAATTTACTTAGAGCCTTGGCATGCGGACATATTTGAGTTCTTAGAT-TTAAAAAA 2455 Query 110817 AATCA-AGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGA 110875 | || ||| |||||| ||||| | || | |||||||| | ||||| |||| Sbjct 2456 GAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGA 2515 Query 110876 TTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTC 110935 | | || |||||| | || || | ||| ||| ||| |||||||||||| || Sbjct 2516 TCTGTTTATGAAAAGGGTAGAAAAGGATGAAGATTGGAGTCTCATGTGTCCTCATGATTG 2575 Query 110936 TCCTGGTCTATCTGA-TGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAA 110994 |||||| || |||| ||| || ||| | || || |||| ||| || | ||||||||| Sbjct 2576 TCCTGGCCTCGCTGACTGT-TACGGAGAGGAATTCGAAGCCCTATATGCCAAATATGAAG 2634 Query 110995 AAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAAT 111054 ||||| |||| |||| | | ||||||||| | ||| || | ||| Sbjct 2635 AAGAAAAACGGTTTATAAAACGAGTCAGAGCTCAAGAGTTATGGAAGTCTATTATAGAAG 2694 Query 111055 CACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTA 111114 | ||||| || ||||| || || ||||| |||||||| ||| | || | || || Sbjct 2695 CTCAAGTGGAGACTGGTACACCATATATGTTGTATAAGGATGCTTGCAACAGAAAGAGTA 2754 Query 111115 ATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 |||||| ||| | || || ||||| | ||| ||| | ||| Sbjct 2755 ATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 2795 >seq54952 Length=6343 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| || ||||| |||| | |||||| |||| ||| | |||| |||||| | Sbjct 752 CATTTGAGAGATGATGATCTGGTTATTTTCAATCGGCAGCCAACTTTGCACAAAATGAGT 811 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCT 305428 ||||||| ||| | ||||||||||| | | | |||||||| | ||| | ||| Sbjct 812 ATGATGGGTCACAGGGTCAAAGTATTGCCGTGGTCCACATTTCGTATGAATTTGAGTTGC 871 Query 305429 TGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 | |||| |||||||| || |||||||| || ||||||||| | |||||||||||||| Sbjct 872 ACTTCGCCATATAATGCTGACTTTGATGGCGACGAAATGAATTTACATGTACCTCAATC 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181904685967814