Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq153336 141 2e-28 seq218964 123 6e-23 seq117972 118 2e-21 seq131538 100 7e-16 seq117971 84.2 5e-11 >seq153336 Length=250 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || |||||||| || ||||| ||||||||| |||||| ||| ||||| Sbjct 217 AAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTCTGATACAATCGAAAAT 158 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||||||| || ||||| ||| || ||| |||||| | || ||| Sbjct 157 GTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAACAAAGATTGATTTTC 98 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| |||||||||| | || || | || || ||| ||||||| || ||| Sbjct 97 GCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAACATCCAGAAGGAATCT 38 Query 206365 ACTCTTCACCTTGTTTTG 206382 ||| | ||| | || ||| Sbjct 37 ACTTTGCACTTAGTGTTG 20 >seq218964 Length=932 Score = 123 bits (136), Expect = 6e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| || ||||||||||| ||| ||| ||||| | ||| Sbjct 655 AAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCCGACACTATTGAAAAT 714 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| || ||||| ||| || || ||| | | || || Sbjct 715 GTAAAAGCGAAA-ATTCAAGACAAGGAAGGCATTCCTCCAGATCAACAACGTTTGATTTT 773 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| |||||||| |||||||| || | ||| | | || |||||| | || ||||| || Sbjct 774 CGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTACAACATTCAAAAAGAATC 833 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||||||| || ||| | || || Sbjct 834 TACTCTTCACCTGGTATTGCGTCTACG 860 >seq117972 Length=685 Score = 118 bits (130), Expect = 2e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || ||||| || || ||| ||||||||||| ||||| Sbjct 269 CAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCTGAT 210 Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| ||||| || ||| || ||||| ||||| || || || || || Sbjct 209 ACTATTGAAAATGTAAAAGCTAAA-ATCCAAGACAAAGAGGGCATCCCACCTGATCAGCA 151 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | |||||||| || || ||||| ||||||||||| | ||| | ||||||||||| | Sbjct 150 GCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAACAT 91 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||| ||||||||||| | || ||| | ||||| Sbjct 90 TCAAAAAGAATCTACTCTTCATTTGGTATTGCGTCTTCG 52 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| || ||||| ||||| ||| ||||||||| | ||| Sbjct 485 AAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCTGACACAATTGAAAAT 426 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || || ||||| |||||||| ||| || || ||| | ||||| ||| Sbjct 425 GTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAACAACGTCTTATTTTC 366 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | || | | || |||||| |||| ||||| ||| Sbjct 365 GCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAACATCCAAAAAGAATCT 306 Query 206365 ACT 206367 ||| Sbjct 305 ACT 303 >seq131538 Length=717 Score = 100 bits (110), Expect = 7e-16 Identities = 108/142 (76%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 206246 TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCG 206305 ||| |||||| ||||| || |||||||| ||| || ||| || || | || || | Sbjct 8 TAAGGCAAAA-ATTCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGGTTGATTTTTG 66 Query 206306 CCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTA 206365 |||| ||||| | ||||||||| | || || | |||||||| | |||||||| |||| Sbjct 67 CCGGTAAGCAACTTGAAGATGGACGAACATTATCTGATTACAATATTCAGAAAGAATCTA 126 Query 206366 CTCTTCACCTTGTTTTGAGACT 206387 |||||||||||||| | ||||| Sbjct 127 CTCTTCACCTTGTTCTCAGACT 148 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||| | |||||||||||||||||| |||||||| | ||| || |||| || || | | Sbjct 148 AGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCGT 89 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || ||||| ||||| || || | || ||||| Sbjct 88 CCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTG 48 >seq117971 Length=252 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 ||| | || ||||| ||||| ||||||||||||||||| | ||||| | || |||||| Sbjct 15 CAACGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGGCGTACTTTATCGGACTACAAC 74 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 |||| || |||||||| ||||| ||||| Sbjct 75 ATCCAAAAGGAGTCTACCCTTCATCTTGT 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176933330592854