Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 347 1e-90
seq5177 123 2e-23
seq117972 104 2e-17
seq153336 93.3 4e-14
>seq21365
Length=2821
Score = 347 bits (384), Expect = 1e-90
Identities = 920/1388 (66%), Gaps = 38/1388 (3%)
Strand=Plus/Minus
Query 59754 TCTAAAGGCGGTCGATATAAAAATGACCGTCAAACTATGTAATTCGGACGGATGCACTTC 59813
|| ||||| || |||| ||| |||| || |||| || ||| ||||| |||| |||
Sbjct 1495 TCGAAAGGTGGAAGATACCAAA-TGACAGTGGAACTTTGCAATGAAGACGGCTGCAGTTC 1437
Query 59814 GAGTCAGCCGGTCGATGTTGTCATTGCAGATACCGACGGCTCTCATCTCGCTCCGTTATA 59873
|| | || ||| ||||| | || ||||| || || |||| | ||| || |
Sbjct 1436 AAGCGATCCCACCGAAATTGTCGTGGCCGATACTGATGGAAGTCATTTACTTCCTTTGGA 1377
Query 59874 TTATGAATATCAAGAACTGAACCAGCCCTTCGAAAGTCGAGTAGTGGATAAAGTCGTTGC 59933
||| || |||| || | || ||| ||| | |||| ||||| || |
Sbjct 1376 ATATACATTGGGAGAAAAAAATAAACCATTC--AAGCAAACATCTGGA-AAAGTTGTGGG 1320
Query 59934 CGCATATTTTGTCGAATGGGGTGTTTATCCTAGAAATTTTCCTGTAGATCGAGTGCCCAC 59993
||| || || || ||||||||||| || ||||| || || || || ||||| | || |
Sbjct 1319 CGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTATACCTAT 1260
Query 59994 TCCTAATCTATCGCATATTCTATACGGATTTATTCCGATATGCGGCGGCGACGGTATCAA 60053
|||||||| | ||| | || || || |||||||| || |||||||| ||||| || ||
Sbjct 1259 ACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAA 1200
Query 60054 CGACAGTCTTAAAACC-ATAACCGGTAGTTTCGAAGCGCTTCAGCGATCGTGTTCAGGTC 60112
|| || ||||||| || || |||||| |||| || || || || ||| || |
Sbjct 1199 TGATAG-CTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCC 1141
Query 60113 GAGACGACTTTAAAGTATCAATTCACGATCCATGGGCCGCCGTCCAGAAACCCCAAAAAC 60172
| || ||||| ||||| ||||| |||||||||||||| || | || ||||| ||||||
Sbjct 1140 GTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAG 1081
Query 60173 AAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTCGGACAATTAATGGCAGCCAAAC 60232
| | | | |||||||| || |||||||| || || || ||||||||| || ||||
Sbjct 1080 GATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAAC 1021
Query 60233 TGGCAAATCCCCACATCAAAGTGTTGCCCTCGATCGGAGGTTGGACTCTATCCGATCCGT 60292
|| || | | || | | |||||||| || || ||||| || ||||||| |
Sbjct 1020 AAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTT 961
Query 60293 TCTTTTACTTTCACGATACGGATAAACGA--AAGATTTTTGTAGATTCTGTCGTGGAGTT 60350
|||| | || || | |||| || | ||||| || || || || ||||||
Sbjct 960 TCTTCTTTTTAGTTGACAAATCTAAAAGAACACGATTTGTGCAG--TCAGTAAAGGAGTT 903
Query 60351 TCTACAGACGTGGAAATTTTTCGACGGTGTCGACATCGACTGGGAGTTTCCCGGCGGAAA 60410
||| | || |||||||| ||||| ||||| || ||||| ||||||||||| || || ||
Sbjct 902 TCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGTAA 843
Query 60411 AGGTGCCAATCCCAACGTAGGCGACGCCGAACGCGATCGCGAAACGTACACCATTCTGTT 60470
|||||| || || || | || | | ||| ||| | || || | | || |
Sbjct 842 AGGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTGTTATGTAAGTTTGAT 786
Query 60471 GAAAGATTTACGCGAGGCGCTAGATCGATTAACCCTC-GAAACGAATCGAACG---TACG 60526
|||||| ||||| ||| || ||||| | | ||| | | |||| | | | ||||
Sbjct 785 GAAAGAATTACGTGAGATGC----TCGATGAGCTCTCAGCTAAGAATGGCAAGAAATACG 730
Query 60527 AGTTGACCAGCGCAATTAGCGCCGGCGATGACAAAATCGCCGTCGTCGACTACACCGCTG 60586
| ||||| || |||||| | || || |||||| || || |||||| | |
Sbjct 729 AATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAGG 670
Query 60587 CTCAAGAATATTTAGATTTAAtttttttGATGACGTACGATTTTAAAGGAGCCTGGTCGA 60646
||||| | ||| | ||| ||||| ||||||| || || || || ||||||||||| |
Sbjct 669 CTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTGGTCAA 610
Query 60647 ATAACGATCTGGGCTATCAGACTACTCTATACGCTCCTTCGTTTAATCCTAAAGAACATT 60706
|| | ||| || |||| || | | ||||| ||| | | ||||| || ||| ||
Sbjct 609 ATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAACTT 550
Query 60707 ATACTACCGATTTTGCCGT-TCGTGCTCTACTCAAGCAAAAAGTCGAGAATaaaaaaaTT 60765
| || | || || | || | || | | || ||| | ||| || |||
Sbjct 549 ACACATCTGACTTCGGAGTAAAATACT-TGTTGGCACAGGGAGTGAATCCTAAGAAGATT 491
Query 60766 ATTGTCGGCGTGGCCATGTACGGTCGCGGCTGGACCGGCGTAAGCGATTTTGTTGACGAT 60825
| | || || |||||||| ||||| || ||||| ||||| |||| || ||
Sbjct 490 GTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATGATT---ACGAAGAC 434
Query 60826 AATAATCCATTTTCCGGAACGGCCAAGGGACCGGTCAAAGGAACATGGGAAGACGGAGTC 60885
|| | ||| || | || | || | ||||| |||||||| || ||| ||||||||||
Sbjct 433 AACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGTG 374
Query 60886 GTCGACTATAGAGAGATTTTCAAT-AATTTCGTC--GCCAATAACCCGATGGAAT---AT 60939
|| || || ||||||||| ||| || || || | ||| | ||||| ||
Sbjct 373 GTTGATTACAGAGAGATTGCGAATGAAATTGCTCAAGGCAA------GTGGGAATTTCAT 320
Query 60940 TACGATTCCGTTGCAAAAGCGGCGTACGTCTTTAATAACTCGACCGGCGAGCTCATCACT 60999
||||| || || |||| | || ||||| | || || || || || | ||
Sbjct 319 TACGACAATGTCGCCCAAGCTCCTTATGTCTTCAGACCATCAACTGGAGACCTTGTAACC 260
Query 61000 TACGACAATCCTCGGTCGGTTCTGGATAAAGCAAAATATGTATTGGACTATAGCTTGGGT 61059
|| |||||| || | || ||| | || || | |||||||| | | | | |||
Sbjct 259 TATGACAATGCTAGATCAGTTATTGAAAAGGGTAAATATGTGAGAAATAACAAACTAGGT 200
Query 61060 GGTTTGTTCGCTTGGGAGATCGACGCCGACAACGGATTACTTCTAAACGCCATGAACAGC 61119
||| | || |||||||| ||||||||||||||||| || || || ||||||||||
Sbjct 199 GGTCTCTTTGCTTGGGAAATCGACGCCGACAACGGTGATCTACTGAATGCCATGAACATG 140
Query 61120 GGTCTCGG 61127
||||||||
Sbjct 139 GGTCTCGG 132
>seq5177
Length=4331
Score = 123 bits (136), Expect = 2e-23
Identities = 662/1037 (64%), Gaps = 33/1037 (3%)
Strand=Plus/Minus
Query 136972 AGATGCTGATTTACTACTTGATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTA 137031
||||| || || ||||| || |||| || |||| ||||| | | ||| | |||
Sbjct 3427 AGATGATGGTTCACTACAGGAAATTCTCCAGATAAAACTCTTCTTTGGTAAATATTTGAT 3368
Query 137032 GTGAACGGCTCGAACGATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATG 137091
|| || || || || ||||| |||| || | ||| |||||||| | || ||||||||
Sbjct 3367 GTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 3308
Query 137092 TAAGCGATCAACAATGAATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTC 137151
|| ||||| | ||||| || ||||| ||| || | | || ||||| | |
Sbjct 3307 GGTGCTATCAATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCC 3248
Query 137152 CAGTTCCACAGAT-TGTTCGATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCG 137210
|||| ||| || | ||| || ||| | ||||||| |||| |||| | | || |
Sbjct 3247 CAGTCCCAAAGGTCTGTAGGA----GTTTTGTTCCACATATCATACTGGAGGATACCTTG 3192
Query 137211 ACTTGCAGGACTTTCTGCATAAGAATCATATGTTCCGTGCAGTTTC-GCCAGTTCAATAC 137269
|| || |||||| || ||| | |||| || | | |||| || | |||| ||
Sbjct 3191 GCTAGCTGGACTTCCTTGATATGTGCTGTATGCACCTT-CTTTTTCTGCTAATTCACAAC 3133
Query 137270 TCTGGACTAGTGCGCCATAGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTT 137329
| ||| ||| ||||| ||||| ||||| | |||| | ||| | | | ||||
Sbjct 3132 TAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTT 3073
Query 137330 CTTGGCTGTCGTAGGGCATATCCAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGA 137389
| || ||||| || || || | | || | |||||| | || |||| ||| |
Sbjct 3072 TCTCACTTTCGTAAGGTATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAA 3013
Query 137390 TACCGATAGGTCTGTGTTTAAAATTTGATATTTGAGCGCTAACAAGCGGATAAAAGTTTG 137449
|||||||||| | ||| | | |||||| ||| || | | |||||||||||
Sbjct 3012 TACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAA 2953
Query 137450 CGTCTATAATTCTATTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCGA 137509
| || || | | | || | ||| | ||| || | | | | || | | || |
Sbjct 2952 CATCAATGACTTTGTTTAAATTTTGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAA 2893
Query 137510 AATCGAAGCTTTTAGACTGTTTGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTGC 137569
|| || | ||| || | | |||| | || | || || || || | |||||
Sbjct 2892 AACTAAATCGATTA------TTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGC 2839
Query 137570 ATACGGCCGTTTC-TGTATTGTCGCTGTATTGTACAATTTCGGCGCAAAGATTGCTGTTT 137628
| || ||| ||| | | || | ||||||| |||| || | |||||||||||| |
Sbjct 2838 ACACTGCCACTTCATCTTCTGAAG-TGTATTGCACAACCTCAGTGCAAAGATTGCTACAT 2780
Query 137629 CGGATCACTCCCAA-ATTCTTTTGATT-GTTTTTCTCGTTGACGTGATCTTTATATATCA 137686
|| | | |||| ||| |||||||| | ||||| |||| ||| ||||| | ||
Sbjct 2779 TTAAT-AGTGCCAAGATTTTTTTGATTACTCTTTCT-GTTGCAAGCATCCTTATACAACA 2722
Query 137687 TATACGGAGTTCCGGTTTCGACTTGAGTCTCAACAAT--TTTTCTGTGAAGATCCAACGC 137744
|||| || || || || || ||||||| || | ||| ||| | | || ||
Sbjct 2721 TATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATAGACTTCCAT--AACTCTTGAGC 2664
Query 137745 CATAATTTGTTCTCTAAAC---TTGCCTTGAGCTTCAAAACTTTCGTATAGCCGTTTAAA 137801
| | | ||| | ||||| || ||| ||||| | | | ||||| || ||
Sbjct 2663 TCTGACTCGTTTTATAAACCGTTTTTCTT---CTTCATATTTGGCATATAGGGCTTCGAA 2607
Query 137802 TTTTTCGCCCATAACAATC-GTTAGACCCGGACACTCGTCGGGACACATCA-ACGACCAT 137859
|| || || ||||| || | || || ||||| || | |||||||| | || | ||
Sbjct 2606 TTCCTC-TCCGTAACAGTCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAT 2548
Query 137860 TTTCCTCCCGTCCTAACCCTTTCCATGAACAGAGAAGGCGTCCATATAGCAAAAAGAAGG 137919
||| ||| | || ||||||| ||| |||||| || |||||| |||| ||| ||
Sbjct 2547 CTTCATCCTTTTCT-ACCCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGT 2489
Query 137920 TCGCGAGCCTTCATATCTTCGGCGCCCATATTGCGTTTTAAATCCaaaaaagtaaaaaTA 137979
|| | ||| |||| ||||| || | || ||||||||| || || ||| ||
Sbjct 2488 TCTCTAGCTCTCATTTCTTCCTTACCTGTGTTCTTTTTTAAATCTAAGAACTCAAATATG 2429
Query 137980 TCAGCATGCCAAGGCTC 137996
|| ||||||||||||||
Sbjct 2428 TCCGCATGCCAAGGCTC 2412
>seq117972
Length=685
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| ||||| |||| ||||| | || || | ||||| ||| ||
Sbjct 272 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 213
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|||||||| || | |||||| ||||| || |||||||| || || || ||||||
Sbjct 212 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 153
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| | || || | | || || ||| | ||||||| | | | | | |||||||||
Sbjct 152 CAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAAC 93
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
|||||||||||||| || ||||||| || ||
Sbjct 92 ATTCAAAAAGAATCTACTCTTCATTTGGTATT 61
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| |||||| | || || ||| | || || | ||||| ||||||
Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | ||||| ||||| || ||||| || || || || |||||
Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||| | || |||| || ||||| ||| | ||||||| | | | | || |||||
Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
|| ||||||||||| || | |||||||| | | || ||||| ||||
Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGGAA 272
>seq153336
Length=250
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | |||||||||||| |||| |||||| | || || | ||||| |||||
Sbjct 232 ATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTCT 173
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || || ||| ||| || || || || || || || || ||
Sbjct 172 GATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAA 113
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352
|||||| | |||| || ||| || ||||| ||||||| | | |||| || || |
Sbjct 112 CAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTC--GGACTATA 55
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
| || || || ||||| || | || ||||||||
Sbjct 54 ACATCCAGAAGGAATCTACTTTGCACTTAGTGTT 21
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 443298588751680
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