Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq21365 217 1e-51 seq218964 159 3e-34 seq117972 131 2e-25 seq153336 125 7e-24 seq2512 102 8e-17 seq42689 91.5 1e-13 >seq21365 Length=2821 Score = 217 bits (240), Expect = 1e-51 Identities = 746/1149 (65%), Gaps = 42/1149 (4%) Strand=Plus/Minus Query 104632 CCCAATCTGTCGCACATGCTTTACGGATTTATACCGATTTGCGGTGGCGACGGCATCAAC 104691 || ||||| | || |||| || || ||||| || |||||||| || |||||||| || Sbjct 1258 CCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAAT 1199 Query 104692 GAC-GCTCTAAAGACCGTTCCG-GGTAGTTTTGAAGCGTTGCAAAAATCGTGCGCTGGAC 104749 || ||| ||||| | || || ||||| |||| ||||| || || || | Sbjct 1198 GATAGCTTAAAAGA--GATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCC 1141 Query 104750 GGGAAAACTTCAAAGTGGCCATTCACGATCCGTGGGCGGCGGTGCAAAAACCGCAAAAAG 104809 | || |||||||||| | || |||||||| ||||| || | |||||||| ||||||| Sbjct 1140 GTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAG 1081 Query 104810 GTGCCTCCGCTTGGAACGAACCGTACAAAGGCAATTTTGGTCAGATAATGGCCATCAAAA 104869 | || | |||||||| || ||||||||||| ||||| || ||||| | | ||| Sbjct 1080 GATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAAC 1021 Query 104870 AAGCCAATCCTCAATTGCGCGTATTGCCCTCGGTGGGCGGGTGGACGCTGTCCGATCCTT 104929 ||||| ||| ||||| | | |||||| | || ||||||||||| ||||||||| Sbjct 1020 AAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTT 961 Query 104930 T----TTATCACATGCACGACGCTGAAAAACGTGCCACG-TTTGTGGAGTCGGTGCGCGA 104984 | || | | || || | || ||| | |||| |||||| |||| || || Sbjct 960 TCTTCTTTTTAGTTG-ACAAATCTAAAAGA----ACACGATTTGTGCAGTCAGTAAAGGA 906 Query 104985 ATTTTTGTTGACTTGGAAATTCTTCGATGGCGTCGACATCGATTGGGAGTTTCCGGGCGG 105044 ||| | | || ||||||||||||||||| || || ||||||||||||||||| || || Sbjct 905 GTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGG 846 Query 105045 CAAAGGCGCCAACCCCAATCAAGGCGACGCGAAACGCGATGCTCTCACGTACGTGTCTCT 105104 ||||| || ||||| | | || | | || |||| | || || | | Sbjct 845 TAAAGGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTGTTATGTAAGTTT 789 Query 105105 TTTGAAAGAGTTGCGTTCGATGCTCGACGA----TTTGCAAAAACAAACCAATCGCTCCG 105160 ||||||| || ||| ||||||||| || | || || | | ||| | || Sbjct 788 GATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCTAAGA-ATGGCAAGAAATACG 730 Query 105161 AGCGTTTGTTGCTCACCAGCGCCATCAGCGCGGGCGACGACAAGATCGCCGTGGTGGATT 105220 | ||| || || || ||| | || || || ||| || || || | Sbjct 729 A---ATTG------ACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGACT 679 Query 105221 ACGGTCACGCTCAAACCTACTTGGATTTGATATTTTTGATGAGTTACGATTTTAAAGGCG 105280 |||| | ||||||| || ||||| || || ||||||||||| || || || || | Sbjct 678 ACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAG 619 Query 105281 CCTGGTCCAACACAAATCTCGGTCATCAGACGGCGTTGTACGCACCCGCGTGGAAACCCA 105340 ||||||| || | ||| || ||||| || | |||||||| || || ||||| |||| Sbjct 618 CCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATCCCA 559 Query 105341 ACGAACGCTACACCACCGATTACGCCGTGAACGCTCTGTTGAAACAGAACGTGCTGCCCC 105400 | ||| ||||| | || | || || || ||||| |||| ||| || Sbjct 558 AGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATCCTA 499 Query 105401 GCAAAATTGTTGTTGGCGTGGCGATGTACGGCCGCGGTTGGATCGGCGTCACCGATTTCC 105460 || ||||| | || || || ||||| || || ||||||| ||||| |||| | Sbjct 498 AGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATGATTACG 439 Query 105461 CGGACGACGATCCGTTCGGCGGAACGGCGCGCGGTCCCGCCGTCGGCACTTGGGAAGATG 105520 ||| || ||| ||| || | || || || | | || |||||| |||| | Sbjct 438 AAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACG 379 Query 105521 GCGTTGTCGATTACCGTCA-ACTG---GTGAACTTGC-----CCGATTTTGAATTTTTGT 105571 | || || |||||| | | | || |||| |||| | | | |||||| | Sbjct 378 GAGTGGTTGATTACAGAGAGATTGCGAATGAAATTGCTCAAGGCAAGTGGGAATTTCATT 319 Query 105572 ACGACAGAGTGGCGCGCGCCGCGTACGCGTTTCAACACAGC-ACCGGCACTCTTCTTTCG 105630 |||||| || || | || | || | |||| || | || || ||| | | Sbjct 318 ACGACAATGTCGCCCAAGCTCCTTATG-TCTTCAGACCATCAACTGGAGACCTTGTAACC 260 Query 105631 TACGACAGCGTTCAAACGGTGCTCGACAAGGGTCGGTATGCGCTAAAGCGTAAATTGGCC 105690 || |||| | | | | || | || |||||| |||| | ||| ||| | | Sbjct 259 TATGACAATGCTAGATCAGTTATTGAAAAGGGTAAATATGTGAGAAATAACAAACTAGGT 200 Query 105691 GGCTTGTTTGCGTGGGAGATCGACGCCGACAACGGCGATCTGTTGAACGCCATGCACGCC 105750 || | ||||| ||||| ||||||||||||||||| ||||| |||| |||||| || Sbjct 199 GGTCTCTTTGCTTGGGAAATCGACGCCGACAACGGTGATCTACTGAATGCCATGAACATG 140 Query 105751 GGTCTCGGT 105759 ||||||||| Sbjct 139 GGTCTCGGT 131 >seq218964 Length=932 Score = 159 bits (176), Expect = 3e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || ||||| || ||||| || || ||||| ||||||||||||||||| Sbjct 868 TTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTG 809 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||| | ||| || | || || || || ||||||||||| || ||||| || | Sbjct 808 AAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 749 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || ||||||||||| ||| || || | |||||||| | ||| | Sbjct 748 GAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAA 689 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 | || | ||||||||||||||| || | ||||| |||||||| ||||||||| Sbjct 688 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTG 636 >seq117972 Length=685 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || ||||| || | || || || ||||| |||||||||||||| ||| Sbjct 44 TTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGG 103 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||| || || || | || || || ||||| || | ||||||||||| || | Sbjct 104 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTG 163 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| ||||| ||||| ||||| ||| || || | || || || | ||||| Sbjct 164 GGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 223 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || ||||||||||| || || |||| |||||||| ||||| |||||| Sbjct 224 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || ||||| ||||| ||||||||||| || || || || || | || ||||| Sbjct 304 GTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGCTTGCCC 363 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || ||||| | ||| || ||||| || || ||||||||||| ||||| ||||| || Sbjct 364 GCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTTT 423 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | |||||| || | ||| || || | |||||| ||||| || || | ||| Sbjct 424 ACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTGCCAGTAAGTGTT 483 Query 134697 TTAACGAAAATTTGCAT 134713 ||||| ||||||||||| Sbjct 484 TTAACAAAAATTTGCAT 500 >seq153336 Length=250 Score = 125 bits (138), Expect = 7e-24 Identities = 168/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || || || |||||||| | ||| | || |||||||| || ||||| ||||| Sbjct 4 TTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTC-- 61 Query 134545 CAACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | || ||||| | || || || || || || || |||||||| | || || || || Sbjct 62 CGACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGG 121 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || |||||||| || |||||||| ||| || || || | ||| || || | ||| Sbjct 122 AGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTC 181 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||| || | |||||| ||||| || |||| ||||| || |||||||||||| Sbjct 182 CACTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCATT 233 >seq2512 Length=3386 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 52805 CGCAAAAACGGACATTGCGGTGCCCACCGTCGATGATCGATTTCTGGATCGTCGCCATCC 52864 |||| || || || || || ||||||||| | || || | | ||||||||||| | Sbjct 1366 CGCAGGAAGGGGCACTGGGGCGCCCACCGTTGGTGGTCCTTAGCGGGATCGTCGCCCGCG 1425 Query 52865 ATCCATTTCATTATTTCCACTTTGCAAAAAGCACATCGCACTTCGTCGTTGCGACCCAAA 52924 | ||||||||| ||||| ||||| ||||| || || || ||||| || ||| |||| Sbjct 1426 ACCCATTTCATAATTTCTACTTTACAAAACGCGCAGCGTACTTCATCACCGCGGCCCAGG 1485 Query 52925 TAATAAAAACCGTTTCGAGCGAGTCGTGCGGGCGACAGAAAACACAAC-GGCCATCCAAC 52983 ||||| || ||||| | ||||| | |||| | | |||| ||||| |||||||| | Sbjct 1486 TAATAGAAGCCGTTCCTTGCGAGAGATTCGGGTAATA-AAAATACAACGGGCCATCCGAT 1544 Query 52984 AAAAGTGTTGAGTCG 52998 ||| || || || || Sbjct 1545 AAATGTCTTTAGCCG 1559 >seq42689 Length=544 Score = 91.5 bits (100), Expect = 1e-13 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 |||||||||||||||||||||||||| | ||| || | || || |||||||| || Sbjct 124 GTGGATTCCTTTTGAATGTTGTAGTCAGACAA-TGTACGTCCATCTTCTAGCTGTTTACC 66 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| |||||||| ||||| || || || || ||||| || ||||| ||||| Sbjct 65 AGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTT 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503359281710480