Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5177 598 6e-166 seq228136 95.1 2e-14 seq197295 87.8 2e-12 >seq5177 Length=4331 Score = 598 bits (662), Expect = 6e-166 Identities = 1111/1613 (69%), Gaps = 27/1613 (2%) Strand=Plus/Minus Query 68356 ATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAG 68415 |||||| | || || | ||||||||||| | | ||| |||||||| |||| ||| Sbjct 3775 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 3716 Query 68416 TACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAA 68475 ||||| || ||||| | ||| | |||| ||| |||||| || |||||||| | Sbjct 3715 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 3656 Query 68476 TAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTA 68535 || | || | || | ||| || || | ||||||||||| || || || ||||||||| Sbjct 3655 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCTA 3596 Query 68536 TCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAAATCT 68593 || |||||||| | ||| | || | | ||| ||||| | || || | |||||| Sbjct 3595 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 3536 Query 68594 GTTTGATATCATCTGGAAGGCTCGTATTTT---GAATGGATCCACCATCGGATATAATTA 68650 || || || | || | | | ||| | || |||||| | | ||||||| | Sbjct 3535 CTT--ATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 3478 Query 68651 TATTCTTGATCTCATCATTCCACAATTTTCTCTCC-GTTAAAACTCTAAGGAGATGCGGA 68709 ||| || || || |||| ||| || | ||| || ||| | | || ||||| | Sbjct 3477 GATTTTTCATATCTTCATCCCATAAATCAG-CTCGAGTCAAATCAGTCAGAAGATGATGG 3419 Query 68710 TTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGT 68769 || |||| ||||||| |||||||| ||||| | ||||||||| ||| ||||| Sbjct 3418 TTCACTACAGGAAATTCTCCAGATAAAACTCTTCTTTGGTAAATATTTGATGTAAATGGT 3359 Query 68770 TCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACC 68829 || | ||||||| | || || |||||||| ||||| || ||||| ||||||||||| | | Sbjct 3358 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATC 3299 Query 68830 AATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAA 68889 |||| | ||| | | ||||||| || || || ||||| || ||| |||||| Sbjct 3298 AATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTCCCAA 3239 Query 68890 AGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT 68949 || || | || ||||| | ||| || || || || || | || || | Sbjct 3238 AGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTT 3179 Query 68950 CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009 || | |||||| || | ||||| | ||| |||| ||||||||| || ||||||||| Sbjct 3178 CCTTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCA 3119 Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069 || |||||||||||||| || || | | ||| || | ||||| ||| ||| | Sbjct 3118 CCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAA 3059 Query 69070 GGATAATGTAAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128 || || | | | | | ||||| |||||||| |||||||| |||||||||||||| | Sbjct 3058 GG-TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGACG 3000 Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188 || ||| |||||||| ||| ||||| || | ||||||| | |||| ||| || | ||| Sbjct 2999 GTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTT 2940 Query 69189 ATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCC 69248 || | |||| | || | ||| | || |||| ||| |||| |||||| Sbjct 2939 GTTTAAATTTTGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAACTAAATCGATT 2880 Query 69249 ATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCAT--TA 69306 || | ||||||||| || ||||||| || || || || || ||||| || |||| | Sbjct 2879 ATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTC 2820 Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366 | || ||||| | | ||| || || ||||| |||||||| ||||| || |||||| Sbjct 2819 TGAAGTG--TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTT 2762 Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426 | |||||||||||| |||| || || ||||| || | ||| | || |||||||| || Sbjct 2761 TTTTGATTACTCTTTCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCTCC 2702 Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACG-GTCTTGTAA-- 69483 | |||| ||| |||||||| ||||| | || || | | | | || || || ||| Sbjct 2701 ACTTGAGCTTCTATAATAGACTTCCATA--ACTCTTG-AGCTCTGACTCGTTTTATAAAC 2645 Query 69484 CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCC 69543 || || |||| |||||||| | |||||| ||||||||| ||||| || ||| | Sbjct 2644 CGTTTTTCTTCTTCATATTTGGCATATAGGGCTTCGAATTCCTCTCCGTAACAGTCAGCG 2585 Query 69544 AATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACT---CGT 69600 | |||||||| |||| |||||||| | ||| || ||| |||||||| || | | Sbjct 2584 AGGCCAGGACAATCATGAGGACACATGA--GACTCCA-ATCTTCATCCTTTTCTACCCTT 2528 Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660 |||||||| ||||| || ||||| | ||| ||| || ||||| | ||| ||||||| Sbjct 2527 TTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 2468 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || ||||| || ||||| | ||| | ||||| | || || | |||||| || |||| Sbjct 2467 TTACCTGTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAG 2408 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || || || | | || || ||||| ||||| || ||||||| ||||||||||| || Sbjct 2407 TAAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 2348 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 || || ||||||| ||| || | | |||||| || ||||| || |||| |||||| Sbjct 2347 TTGTACACTCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAA 2288 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 || || | ||| | || || |||||| || || || |||||| ||| Sbjct 2287 GACCCCTGGGCTCTAATGCAATGTGTATGTAAACCTATGCCACCGGCAGATTTAGAAATT 2228 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 | ||||| |||| || || || | ||||| || |||||||| ||| |||| Sbjct 2227 AATGCACATTGTTTTAAAGTATCGAAAATACCTTCAATGCTATCGTCTTTCAT 2175 Score = 104 bits (114), Expect = 3e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 ||||| ||||| ||||||| |||||| |||||| ||||||||| ||||||||||||||| Sbjct 1677 TTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 1618 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244 ||| ||||| || |||| ||| |||| | || ||| ||||| | ||| Sbjct 1617 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 1568 Score = 93.3 bits (102), Expect = 6e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 70345 ttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404 || || || || || |||||||| ||||| ||||||||||| || | ||| ||||| ||| Sbjct 1022 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 963 Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTT 70464 ||||| | ||| || ||||||||| ||||| ||||||| |||| | || |||| Sbjct 962 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 903 Query 70465 GTAACTCCGTTATATA 70480 || || || ||||| Sbjct 902 GTTACACCAGAATATA 887 >seq228136 Length=1993 Score = 95.1 bits (104), Expect = 2e-14 Identities = 244/369 (66%), Gaps = 7/369 (2%) Strand=Plus/Minus Query 162494 TTATGACCCC--TATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCATT 162551 |||||||||| ||||| || ||| |||||||| | ||| | || ||| | | ||| | Sbjct 764 TTATGACCCCAGTATTA--CCAATGTTAGCAGAAGCTTGCAAATCAGTTGAAATGGCTAT 707 Query 162552 TAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAAGT 162611 ||||||| |||| ||| |||||| | || | ||||||||||| ||||| || ||||| Sbjct 706 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 647 Query 162612 TCATAAAAACAATAACAAGTTTGCGTTCTTTAGTAGAAACATGAAACCCGTTTTACAACA 162671 |||||||| || |||| | ||| | | | ||||| || | || Sbjct 646 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCGGTAATGGCTCA 587 Query 162672 CAAAGTTGATTATCTAAAAGAATACCTTCCCATAGCATTCAAAAAAGCTACATCTATTAT 162731 ||||||| | || | ||||| || | || | |||||| |||| | | | || Sbjct 586 CAAAGTTAGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGCTGATTTGAT 527 Query 162732 CTTGGATTCTGAAATTGTTCTAGTCGACGAACATAATG---TACCACTTCCGTTTGGAAG 162788 |||||| ||||| | || | || || | ||| || |||| | || ||||| | Sbjct 526 TTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTTGGCAC 467 Query 162789 TTTAGGAATACATAAAAAGAAAGAATATAAAAACTCTAATATGTGTTTGTTCGTGTTTGA 162848 ||||| || || ||| | ||||| |||| | || | | ||||| | | ||||| Sbjct 466 ATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGTTTATATATATTTGA 407 Query 162849 TTGTTTATA 162857 ||| ||||| Sbjct 406 TTGCTTATA 398 >seq197295 Length=1118 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 40088 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCC 40147 |||| | | ||| ||| |||| ||||||||||| || ||||||||||| || || || Sbjct 407 CAGTAAGTAATACCTTA-GATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCT 349 Query 40148 TTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 ||||| ||||| | |||||| || ||||||| ||||| || ||||| || Sbjct 348 TTTTTATACATCTGCCATATGTCGGGATATTGGATTGGGAATATAACGAA 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 684137346237360