Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq197295 98.7 8e-16
seq229024 84.2 2e-11
seq39946 84.2 2e-11
>seq197295
Length=1118
Score = 98.7 bits (108), Expect = 8e-16
Identities = 141/197 (72%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 43796 GACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTT 43853
||||| ||| ||||| |||||||| || ||||||||||| | | | || |
Sbjct 513 GACTTGGCAGATTGGGAGACATTAAAAGATTGCGAGAAACATTTTATCAAACAT--GTCT 570
Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913
| || || ||||| || || || || || ||||| || ||||| || || |||
Sbjct 571 TAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTCTCGC 630
Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973
|||| |||||| | | ||||| | || || ||||| ||||||||||| || ||||||
Sbjct 631 AAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAATG 690
Query 43974 TTCATTCGGAAATGTAC 43990
|||||||||| ||||||
Sbjct 691 TTCATTCGGAGATGTAC 707
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 43709 TTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGG 43768
|| ||||| ||||||| ||||||||||| ||||| |||||||| | || || ||||||
Sbjct 308 TTCCCAATCCAATATCCCGACATATGGCAGATGTATAAAAAAGCTGAAGCATCGTTTTGG 367
Query 43769 ACAGCAGAAGAAGTTGATTTGACTAA 43794
|| ||||||||||| || || ||||
Sbjct 368 ACTGCAGAAGAAGTAGACTTATCTAA 393
>seq229024
Length=315
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|||||||||||||||||||| |||| || | |||||||| ||| || |||| |||
Sbjct 101 CCCAAAATTGTAAATGGTCCACAAATTTTGGACAAATATGTCGGTGAAAGTGAAGCGAAT 42
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACG 19529
| | | ||||||||||| |||||||||||| | |||||
Sbjct 41 ATTAGGAGATTGTTTGCTGATGCTGAAGAAGAAGAGAAACG 1
>seq39946
Length=3916
Score = 84.2 bits (92), Expect = 2e-11
Identities = 107/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090
||| |||||||| ||||| | ||||| ||||||||||| | |||||| ||| || ||
Sbjct 3007 AATTGTCATACGAGAAGGGATGGCATGGGGATTAATAATGATATCTGGCGTTAAGCCCTC 2948
Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCGG 115149
||| |||||||| || | || ||| || |||||||| |||||||||||| |
Sbjct 2947 ACATGTAAACGGCATATC-TTCTTGTCGATATTGGATTCCACATGTTCCTTTTTGACCAT 2889
Query 115150 TAAACGATGCAAATTTATCACCAAT 115174
| || ||||| ||||| |||||
Sbjct 2888 GACGAGAAGCAAACTTATCCCCAAT 2864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395892484357870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |