Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5177 123 3e-23 >seq5177 Length=4331 Score = 123 bits (136), Expect = 3e-23 Identities = 360/549 (66%), Gaps = 18/549 (3%) Strand=Plus/Plus Query 104711 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTC 104770 ||| | ||||| |||||||| || ||||| || || || || || ||||| |||| Sbjct 2499 GCTTTATGGATACCAGATCTGTTTATGAAAAGGGTAGAAAAGGATGAAGATTGGAGTCTC 2558 Query 104771 TTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG--GGTGAGGAGTTTGAAGCCC 104828 | ||||| | | ||||| ||| | || | || || ||||| || ||||||| Sbjct 2559 ATGTGTCCTCATGATTGTCCTGGCCTCGCTGA--CTGTTACGGAGAGGAATTCGAAGCCC 2616 Query 104829 TTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG-GTGCCAGCTGCCGATGTG 104887 | || | || || || |||||| ||| | | ||| || |||| || | Sbjct 2617 TATATGCCAAATATGAAGAAGAAAAACGGTTTA-TAAAACGAGTCAGAGCTCAAGAGTTA 2675 Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||||| ||||| | | ||||| ||||||||||||||||| ||| | || || || Sbjct 2676 TGGAAGTCTATTATAGAAGCTCAAGTGGAGACTGGTACACCATATATGTTGTATAAGGAT 2735 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 || || ||| ||||||||||||||| ||| | || || || || |||||| || Sbjct 2736 GCTTGCAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 2795 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || || | || ||| || ||||||| ||| ||||| ||||| || || || Sbjct 2796 ACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATA 2855 Query 105068 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAA 105127 || || || || ||| || | || |||| || | ||||| | | ||| Sbjct 2856 GCACTTAACATGTTTGT------TGAAAATAATCGATTTAGTTTTAAAAAATTAAAAGAA 2909 Query 105128 GTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT- 105186 | || || | ||| || |||| |||||| ||| |||||| || ||||| || || Sbjct 2910 ATCACTAAGATTGTGACTCAAAATTTAAACAAAGTCATTGATGTTAACTTTTATCCTGTC 2969 Query 105187 --TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGT 105244 ||| || | || |||||||| |||||||| || ||| | |||||||||||| Sbjct 2970 CCTGA---AGCAAAAACTTCAAATATGAGGCACCGTCCTATCGGTATTGGTGTTCAGGGT 3026 Query 105245 CTCGCGGAT 105253 | || ||| Sbjct 3027 ATGGCAGAT 3035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580907532231760