Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq25413 132 5e-26 seq298142 95.1 1e-14 >seq25413 Length=1171 Score = 132 bits (146), Expect = 5e-26 Identities = 215/307 (70%), Gaps = 7/307 (2%) Strand=Plus/Minus Query 158944 AACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGT 159003 |||||||| | |||||||| ||| || || || | |||||||||||| || || ||| Sbjct 558 AACTCGCGCACGCTGTGCGCCTCGCCCGTGGCCACCACAAAGTCCTCGGGCGCGTCCTGC 499 Query 159004 TGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCA 159063 || |||||||||||||||||||| || || || ||||||| ||||||||||||||| Sbjct 498 TGCAGCATGAGCCACATGGCCTCCACATAGTCGCGCGCGTGGCCCCAGTCGCGCTTGCTG 439 Query 159064 TCCATGTTCCCGAGCTCGA----TGAC-TTTTCCAGACTTTTTCCACTCAGCCAGACCGA 159118 || | || |||||||||| ||| | || | | || || | || Sbjct 438 TCGAGATTGCCGAGCTCGAGGTGCGACAAAAGGCCGAGGTGT--ATCTTGGCGACGCCCC 381 Query 159119 GCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGACTCATGGTTAAACAGAA 159178 ||||||||||||||||||| || | | ||||| ||| ||| || || ||||||| Sbjct 380 GCGTGATCTTGCGCGTCACGAAGTTCTCGCCGCGGCGTGGGCTCTCGTGATTGAACAGAA 321 Query 159179 TGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTATCCAA 159238 ||| | || ||||||| | || | |||||| || || ||||||||| || Sbjct 320 GCCCGTTGCACGCGAACATGCCGTACGCCTCGCGATAGTTCACCACTATCCAGTAGCCGT 261 Query 159239 AGAGCTT 159245 | ||||| Sbjct 260 ACAGCTT 254 Score = 131 bits (144), Expect = 2e-25 Identities = 200/283 (71%), Gaps = 13/283 (5%) Strand=Plus/Minus Query 124494 AACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAATCGACTGC 124553 ||||| || | |||||||| ||| |||||| | | ||| || || ||||| |||| Sbjct 558 AACTCGCGCACGCTGTGCGCCTCGCCCGTGGCCACCACAAAGTCCTCGGGCGCGTCCTGC 499 Query 124554 TGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTTGGCA 124613 |||| ||| ||||||||||| | || ||||| ||||| ||||||||||||||| Sbjct 498 TGCAGCATGAGCCACATGGCCTCCACATAGTCGCGCGCGTGGCCCCAGTCGCGCTTGCTG 439 Query 124614 TCCAGGTTTCCGAGCTCGATTGGC-----TTGGCCGTCTTGTTCCACTCCGCCAAACCCA 124668 || || || |||||||||| || ||||| ||| || || | ||| Sbjct 438 TCGAGATTGCCGAGCTCGAGGTGCGACAAAAGGCCGAGGTGT--ATCTTGGCGACGCCCC 381 Query 124669 GTGTAATCTTGCGCGTCACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACA 124725 | || |||||||||||||| || |||| ||||| || |||||| ||||||| Sbjct 380 GCGTGATCTTGCGCGTCACGAAGTTCTCG---CCGCGGCGTGGGCTCTCGTGATTGAACA 324 Query 124726 GAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTT 124768 ||| || | ||||| ||||| ||||||| |||||| ||||| Sbjct 323 GAAGCCCGTTGCACGCGAACATGCCGTACGCCTCGCGATAGTT 281 >seq298142 Length=543 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 |||||||||||||| | ||| |||||||| ||||| || | || || ||||| || || Sbjct 227 GTGAAAATGTAACGGGGGCTAGCAGCATCTTTGCCCCCGGACAGGCGGGTACCAAACTGA 286 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 |||| || ||||| ||||| | |||||| | ||||| |||||||||||| || || Sbjct 287 CCACGGGGTTCCAACAGGTTAATGTTGTTTGACCCCACGTAGTTTTGAGCCAGATTCACT 346 Query 117425 ATCGT 117429 || || Sbjct 347 ATTGT 351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545008161285200