Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq117972 170 2e-37
seq153336 152 6e-32
seq218964 147 2e-30
seq131538 114 1e-20
seq42689 98.7 1e-15
seq117971 91.5 2e-13
seq149208 89.7 6e-13
>seq117972
Length=685
Score = 170 bits (188), Expect = 2e-37
Identities = 175/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||| || || || || || ||||| |||||||| || || || |
Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| |||| |||| | || |||||||| || ||||| ||||| || || || || ||
Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| || || ||||||||||||||| | || |||| ||| || || | || || ||
Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| ||||| ||||| ||||||||| | || ||||||||||| ||||||
Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGTCTTCGTGGTGGA 45
Score = 159 bits (176), Expect = 4e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || ||||| ||||| || |||||| | || ||||| | |
Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| |||| | ||||||||||| || ||||| || || ||||||||||| ||
Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| ||||| || || |||||| | || |||| |||||| || | ||||| ||
Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
||||||| ||||| ||| | ||| |||| | ||| | | ||||||
Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGGA 273
Score = 152 bits (168), Expect = 6e-32
Identities = 143/182 (79%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 27451 GAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGA 27510
||||| || || ||| | |||| |||| ||||||| || || || ||||| || ||
Sbjct 683 GAGGTAGAACCATCTGACACTATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAAGGT 624
Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570
||||| |||||||| ||| | || ||||||||||| || ||||| || |||| |||||
Sbjct 623 ATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACA 564
Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630
||| | || |||||| | ||||||||||| ||||| ||| |||| ||||||||||| |||
Sbjct 563 CTATCTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTATTGCGTCTTCGTGGT 504
Query 27631 GG 27632
||
Sbjct 503 GG 502
>seq153336
Length=250
Score = 152 bits (168), Expect = 6e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| || || || || || || ||||||||| | || || || |
Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | |||| | ||||| || ||||| |||||||| || ||||||||||||||
Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | ||||| || || |||||||| || |||| || || || | ||||||||
Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAA 54
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| |||||||| ||| | || |||| |||||||| | ||||||
Sbjct 53 CATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTAAGGGGTGGA 5
>seq218964
Length=932
Score = 147 bits (162), Expect = 2e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || || || || || || || || || |||||| | || ||||| |
Sbjct 639 AATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCTTC 698
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| |||| | || || |||||||| |||||||| || ||||||||||| ||
Sbjct 699 CGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCA 758
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||| | ||||| ||||| |||||| | || || | || || || ||||||| ||
Sbjct 759 ACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTACAA 818
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| ||||| ||||| |||||||| || || |||||||| || ||||||
Sbjct 819 CATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGTGGTGGA 867
>seq131538
Length=717
Score = 114 bits (126), Expect = 1e-20
Identities = 108/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 27477 AAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAAT 27536
|||| | ||||| |||||||||||||| || || |||||||||||||| ||| | | ||
Sbjct 2 AAATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGGTTGAT 61
Query 27537 TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596
|||||| ||||||||||| || |||| || || || | || || ||| | || || ||
Sbjct 62 TTTTGCCGGTAAGCAACTTGAAGATGGACGAACATTATCTGATTACAATATTCAGAAAGA 121
Query 27597 ATCCACTCTTCATCTAGT 27614
||| |||||||| || ||
Sbjct 122 ATCTACTCTTCACCTTGT 139
>seq42689
Length=544
Score = 98.7 bits (108), Expect = 1e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543
|| |||||||| || || ||||| || ||||| ||||||||||| ||| | || ||||||
Sbjct 6 AAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGCAACGTTTGATCTTTGCT 65
Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCAC 27602
||||| || || || |||| ||||| | | ||||| || | ||||||||||||||
Sbjct 66 GGTAAACAGCTAGAAGATGGACGTACATTGTCTGACTACAACATTCAAAAGGAATCCAC 124
>seq117971
Length=252
Score = 91.5 bits (100), Expect = 2e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | || || ||||| ||||| || || || || || |
Sbjct 123 ATGCAAATATTTGTGAAAACATTAACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 182
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||||||||||| ||||| ||||| || || || ||||||||
Sbjct 183 GACACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCAA 242
Query 27526 CAGCGTCT 27533
||||||||
Sbjct 243 CAGCGTCT 250
>seq149208
Length=369
Score = 89.7 bits (98), Expect = 6e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571
|||| ||||| || || ||||||||||| ||||||||||| || ||||||| |||||| |
Sbjct 1 TTCCCCCAGATCAACAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTC 60
Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
| | ||||| ||| | || || || |||||| | || | || || |||||
Sbjct 61 TCTCTGACTACAATATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTCT 112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568009382886880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |