Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq117972 170 2e-37 seq153336 152 6e-32 seq218964 147 2e-30 seq131538 114 1e-20 seq42689 98.7 1e-15 seq117971 91.5 2e-13 seq149208 89.7 6e-13 >seq117972 Length=685 Score = 170 bits (188), Expect = 2e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| || || || || || ||||| |||||||| || || || | Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| |||| | || |||||||| || ||||| ||||| || || || || || Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || ||||||||||||||| | || |||| ||| || || | || || || Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | ||||| ||||| ||||||||| | || ||||||||||| |||||| Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGTCTTCGTGGTGGA 45 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || ||||| ||||| || |||||| | || ||||| | | Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||||||||| || ||||| || || ||||||||||| || Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| ||||| || || |||||| | || |||| |||||| || | ||||| || Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||||||| ||||| ||| | ||| |||| | ||| | | |||||| Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGGA 273 Score = 152 bits (168), Expect = 6e-32 Identities = 143/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27451 GAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGA 27510 ||||| || || ||| | |||| |||| ||||||| || || || ||||| || || Sbjct 683 GAGGTAGAACCATCTGACACTATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAAGGT 624 Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 ||||| |||||||| ||| | || ||||||||||| || ||||| || |||| ||||| Sbjct 623 ATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACA 564 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 ||| | || |||||| | ||||||||||| ||||| ||| |||| ||||||||||| ||| Sbjct 563 CTATCTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTATTGCGTCTTCGTGGT 504 Query 27631 GG 27632 || Sbjct 503 GG 502 >seq153336 Length=250 Score = 152 bits (168), Expect = 6e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || || || || || ||||||||| | || || || | Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | |||| | ||||| || ||||| |||||||| || |||||||||||||| Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | ||||| || || |||||||| || |||| || || || | |||||||| Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAA 54 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| |||||||| ||| | || |||| |||||||| | |||||| Sbjct 53 CATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTAAGGGGTGGA 5 >seq218964 Length=932 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || || || || || || || |||||| | || ||||| | Sbjct 639 AATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCTTC 698 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| | || || |||||||| |||||||| || ||||||||||| || Sbjct 699 CGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCA 758 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||| | ||||| ||||| |||||| | || || | || || || ||||||| || Sbjct 759 ACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTACAA 818 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | ||||| ||||| |||||||| || || |||||||| || |||||| Sbjct 819 CATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGTGGTGGA 867 >seq131538 Length=717 Score = 114 bits (126), Expect = 1e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 27477 AAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAAT 27536 |||| | ||||| |||||||||||||| || || |||||||||||||| ||| | | || Sbjct 2 AAATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGGTTGAT 61 Query 27537 TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596 |||||| ||||||||||| || |||| || || || | || || ||| | || || || Sbjct 62 TTTTGCCGGTAAGCAACTTGAAGATGGACGAACATTATCTGATTACAATATTCAGAAAGA 121 Query 27597 ATCCACTCTTCATCTAGT 27614 ||| |||||||| || || Sbjct 122 ATCTACTCTTCACCTTGT 139 >seq42689 Length=544 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 || |||||||| || || ||||| || ||||| ||||||||||| ||| | || |||||| Sbjct 6 AAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGCAACGTTTGATCTTTGCT 65 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCAC 27602 ||||| || || || |||| ||||| | | ||||| || | |||||||||||||| Sbjct 66 GGTAAACAGCTAGAAGATGGACGTACATTGTCTGACTACAACATTCAAAAGGAATCCAC 124 >seq117971 Length=252 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || ||||| ||||| || || || || || | Sbjct 123 ATGCAAATATTTGTGAAAACATTAACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 182 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||||||||| ||||| ||||| || || || |||||||| Sbjct 183 GACACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCAA 242 Query 27526 CAGCGTCT 27533 |||||||| Sbjct 243 CAGCGTCT 250 >seq149208 Length=369 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571 |||| ||||| || || ||||||||||| ||||||||||| || ||||||| |||||| | Sbjct 1 TTCCCCCAGATCAACAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTC 60 Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | | ||||| ||| | || || || |||||| | || | || || ||||| Sbjct 61 TCTCTGACTACAATATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTCT 112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568009382886880