Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq117972 125 4e-24
seq218964 123 2e-23
seq153336 114 8e-21
seq2512 95.1 8e-15
seq131538 82.4 5e-11
>seq117972
Length=685
Score = 125 bits (138), Expect = 4e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||||||||| |||||||| ||||| || ||||||||||| ||||| |||
Sbjct 46 CCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAA 105
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| | ||| ||||| ||||| || | ||||| || || || ||
Sbjct 106 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGG 165
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659
| ||||| |||||| ||| || ||||| | ||| || || | ||||||
Sbjct 166 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 225
Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || || || |||| ||||| ||||||||||||||
Sbjct 226 TCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272
Score = 107 bits (118), Expect = 1e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||||||||| || ||||| ||||| ||||||||||| |||||||| ||
Sbjct 502 CCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGAT 561
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| || | ||||| |||||||| || ||||| || | | ||||||||| || ||
Sbjct 562 AGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGA 621
Query 34600 ACTCCCTCCTTGTCTGTGATCTTT 34623
| || || |||||| |||||||
Sbjct 622 ATACCTTCTTTGTCTTGGATCTTT 645
>seq218964
Length=932
Score = 123 bits (136), Expect = 2e-23
Identities = 164/225 (73%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||| |||| || ||||| || ||||||||||| || |||||||| || ||
Sbjct 857 AGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGG 798
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| | ||| || || || || || ||||| ||||| || || || | || |||
Sbjct 797 CCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCC 738
Query 34609 TTGTCTGTGATCTTTTG-TTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| ||| | ||||| | ||| ||||| || ||||||| ||
Sbjct 737 TTGTCT-TGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGT 679
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712
|| |||||||| || | |||||||| ||||||||||| |||||
Sbjct 678 AATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTGAT 634
>seq153336
Length=250
Score = 114 bits (126), Expect = 8e-21
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || ||||||||||| || || | ||| ||||| || |||||||| || ||
Sbjct 6 CCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGAC 65
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| ||| | ||||| ||||| || ||||| || || || | |||||||| || ||
Sbjct 66 AGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 125
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCA 34657
| || ||||||||| ||| |||| ||||| | ||||| || ||| ||||
Sbjct 126 ATGCCTTCCTTGTCT-TGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCT-TCCA 183
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | || || ||||| || |||| ||||| |||||||| |||||
Sbjct 184 CTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232
>seq2512
Length=3386
Score = 95.1 bits (104), Expect = 8e-15
Identities = 126/173 (73%), Gaps = 4/173 (2%)
Strand=Plus/Minus
Query 46826 GGATGGCCCGTC--ACTTTTATTACACCCGAAGTGATGGCACGTAACGGATTTTATTATC 46883
||||||||||| | ||||||||| ||||| | ||| | ||||| || ||||| |
Sbjct 1541 GGATGGCCCGTTGTATTTTTATTAC--CCGAATCTCTCGCAAGGAACGGCTTCTATTACC 1484
Query 46884 TTGGAAGAGGTGATGAAGTTCGATGCGCCTTTTGCAAGGTTGAGATCATGCGTTGGGAAG 46943
| || | ||||||||||| || ||||| ||||| || || || || ||| |||| |
Sbjct 1483 TGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATTATGAAATGGGTCG 1424
Query 46944 AGGGTGATGATCCTGCCGAAGACCATAAACGTTGGGCTCCTCAGTGTCCGTTC 46996
||| || ||||| || | ||||| |||| ||||| || ||||| || |||
Sbjct 1423 CGGGCGACGATCCCGCTAAGGACCACCAACGGTGGGCGCCCCAGTGCCCCTTC 1371
>seq131538
Length=717
Score = 82.4 bits (90), Expect = 5e-11
Identities = 89/117 (76%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| || ||||| || ||||| || | |||||| | ||||||||||| |||||||||||
Sbjct 121 TCTTTCTGAATATTGTAATCAGATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAA 62
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC 34632
|| || | ||||||||| || || | || || ||||| ||| ||||| |||||
Sbjct 61 ATCAACCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTC-CTGAATTTTTGCCTTAAC 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313491514142342
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |