Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq117972 125 4e-24 seq218964 123 2e-23 seq153336 114 8e-21 seq2512 95.1 8e-15 seq131538 82.4 5e-11 >seq117972 Length=685 Score = 125 bits (138), Expect = 4e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||||||||| |||||||| ||||| || ||||||||||| ||||| ||| Sbjct 46 CCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAA 105 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||| ||||| ||||| || | ||||| || || || || Sbjct 106 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGG 165 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | ||||| |||||| ||| || ||||| | ||| || || | |||||| Sbjct 166 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 225 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || || |||| ||||| |||||||||||||| Sbjct 226 TCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 Score = 107 bits (118), Expect = 1e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||||||||| || ||||| ||||| ||||||||||| |||||||| || Sbjct 502 CCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGAT 561 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | ||||| |||||||| || ||||| || | | ||||||||| || || Sbjct 562 AGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGA 621 Query 34600 ACTCCCTCCTTGTCTGTGATCTTT 34623 | || || |||||| ||||||| Sbjct 622 ATACCTTCTTTGTCTTGGATCTTT 645 >seq218964 Length=932 Score = 123 bits (136), Expect = 2e-23 Identities = 164/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| |||| || ||||| || ||||||||||| || |||||||| || || Sbjct 857 AGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGG 798 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| | ||| || || || || || ||||| ||||| || || || | || ||| Sbjct 797 CCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCC 738 Query 34609 TTGTCTGTGATCTTTTG-TTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| ||| | ||||| | ||| ||||| || ||||||| || Sbjct 737 TTGTCT-TGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGT 679 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712 || |||||||| || | |||||||| ||||||||||| ||||| Sbjct 678 AATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTGAT 634 >seq153336 Length=250 Score = 114 bits (126), Expect = 8e-21 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||||||||| || || | ||| ||||| || |||||||| || || Sbjct 6 CCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGAC 65 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| ||| | ||||| ||||| || ||||| || || || | |||||||| || || Sbjct 66 AGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 125 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCA 34657 | || ||||||||| ||| |||| ||||| | ||||| || ||| |||| Sbjct 126 ATGCCTTCCTTGTCT-TGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCT-TCCA 183 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || ||||| || |||| ||||| |||||||| ||||| Sbjct 184 CTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232 >seq2512 Length=3386 Score = 95.1 bits (104), Expect = 8e-15 Identities = 126/173 (73%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 46826 GGATGGCCCGTC--ACTTTTATTACACCCGAAGTGATGGCACGTAACGGATTTTATTATC 46883 ||||||||||| | ||||||||| ||||| | ||| | ||||| || ||||| | Sbjct 1541 GGATGGCCCGTTGTATTTTTATTAC--CCGAATCTCTCGCAAGGAACGGCTTCTATTACC 1484 Query 46884 TTGGAAGAGGTGATGAAGTTCGATGCGCCTTTTGCAAGGTTGAGATCATGCGTTGGGAAG 46943 | || | ||||||||||| || ||||| ||||| || || || || ||| |||| | Sbjct 1483 TGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATTATGAAATGGGTCG 1424 Query 46944 AGGGTGATGATCCTGCCGAAGACCATAAACGTTGGGCTCCTCAGTGTCCGTTC 46996 ||| || ||||| || | ||||| |||| ||||| || ||||| || ||| Sbjct 1423 CGGGCGACGATCCCGCTAAGGACCACCAACGGTGGGCGCCCCAGTGCCCCTTC 1371 >seq131538 Length=717 Score = 82.4 bits (90), Expect = 5e-11 Identities = 89/117 (76%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || || ||||| || ||||| || | |||||| | ||||||||||| ||||||||||| Sbjct 121 TCTTTCTGAATATTGTAATCAGATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAA 62 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC 34632 || || | ||||||||| || || | || || ||||| ||| ||||| ||||| Sbjct 61 ATCAACCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTC-CTGAATTTTTGCCTTAAC 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313491514142342