Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 268 8e-67
seq117972 176 4e-39
seq218964 163 2e-35
seq153336 127 2e-24
>seq21365
Length=2821
Score = 268 bits (296), Expect = 8e-67
Identities = 791/1206 (66%), Gaps = 24/1206 (2%)
Strand=Plus/Plus
Query 53367 ACCCTTGTGTATCGCATTCAAAAGATCTCCGTTGTCCGCGTCGATTTCCCACGCAAACAA 53426
|||| ||| || ||||||| ||||| |||||||| |||||||||||||| ||||| |
Sbjct 137 ACCCATGTTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAG 196
Query 53427 TCCACCGAGATCGTTTTCAATCACATACTGGCCCTTGTCTAGCACGGAATCGATGC--TG 53484
||||| || | ||| | ||||||| | ||||| || | || || || | || ||
Sbjct 197 ACCACCTAGTTTGTTATTTCTCACATATTTACCCTTTTCAATAACTGA-TCTA-GCATTG 254
Query 53485 TCGTAACTGATTAAATCGCCAGAGTTTTTAT----TGAATACAAACGCTGCTTTGGCTGT 53540
|| || | | | || |||| || || |||| ||| | | |||| |||
Sbjct 255 TCATAGGTTACAAGGTCTCCAG----TTGATGGTCTGAAGACATAAGGAGCTTGGGCGAC 310
Query 53541 AGTGTCGTAAGTGTAAT--CGTATTGA--TGGCCAATTTT-TTCGTCAATTTTTCGGTAA 53595
| |||||||| || ||| | ||| || |||||| |||| |||| | || ||||
Sbjct 311 ATTGTCGTAA-TGAAATTCCCACTTGCCTTGAGCAATTTCATTCG-CAATCTCTCTGTAA 368
Query 53596 TCAACGACTCCGTCTTCCCATGTGCCTGTAACAGGGCCAGTTGCCACACCGGTGAACGGA 53655
||||| |||||||||| ||| || ||| | ||||| ||||| || || ||||| |||
Sbjct 369 TCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGA 428
Query 53656 TTGTCATCGCGGTAGCCGCTCACTCCAGTCCAACCGCGCCCGTACATCGCCACTCCGAGA 53715
||| || ||| | || ||||||||||| || || ||||| || || || |
Sbjct 429 ATGTTGTCTTCGTAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTAAT 488
Query 53716 ACAATTTTTTCCTGTTGAACTTTTTGTTCGAGCAACGCGCGCACGGCAACATCGGCCGTG 53775
||||| || | | | ||| ||| | | ||| || | | || | |||
Sbjct 489 ACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTG 548
Query 53776 TAATGCTCGCTGGGAGACCAAACCGGCGCGTAAATCGCCGTTTGATGTCCCAAATCGGTG 53835
||| || ||||| ||| | |||||||| | | ||||||||||| | |
Sbjct 549 TAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCA 608
Query 53836 TTTGACCAAGCGCCTTTAAAATCATACGACATTaaaaaaaTTCTGTCCAGGTATTGTTGG 53895
|||||||| || || || || ||||| ||| || ||||| |||| || | |||
Sbjct 609 TTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGA 668
Query 53896 GCGTCGCGATAGTTGACGACCGCAATTTTATCATTGCCTGCACTGATTGCGCTAGTCAAC 53955
|| | || |||| || || |||||||| || | || || || ||||||
Sbjct 669 GCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAAT 728
Query 53956 TCGAACTTTCGT-CCAGTTTCCAATTCCAATTGATCCAACATTTGTCGCAACTCTTTTAA 54014
||| | |||| | ||| | | | | | ||| | ||| | || || ||||| |
Sbjct 729 TCGTA-TTTCTTGCCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCAT 787
Query 54015 CAACACCACATACGTTAAACTATCTTTTTGAGGATCGCCCACGGACGGATTGGCACCGTT 54074
||| ||||| || ||||| | | | || | | || || ||||| ||
Sbjct 788 CAAACTTACATAACAATCACCATCTTCTGGGCTACCG---AGGTCAGGGTTAGCACCTTT 844
Query 54075 TCCGCCAGGAAACTCCCAATCGACGTCGACACCATCAAAAAATTTCCACGTCAATAGGAA 54134
|| ||||||||||||||||||| || |||||||| || |||||||| || | || ||
Sbjct 845 ACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAA 904
Query 54135 TTCGCGCACGGAATCCACAAACACTTTGCGTTTGGAAGAATCGTGGAAATGGTAAAACGG 54194
|| || || | |||||| | | | ||| || || ||| | | || ||
Sbjct 905 CTCCTTTACTGACTGCACAAATCGTGTTCTTTTAGATTTGTCAACTAAAAAGAAGAAAGG 964
Query 54195 ATCCGATAACGTCCAACCGCCGATTGACGGTAATACTTTGACGTTGGGATTCGCTTTTTT 54254
||| | | |||||| || || || || || | | || | | || |||| |||
Sbjct 965 ATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTTT 1024
Query 54255 CACGGCCATAATCTGTCCAAAATTGCCTTTATACGGTTCGTTCCAGGCGGAGACGCCTTT 54314
| | ||| | || ||||| |||||||| || || |||||||| | || | |||||
Sbjct 1025 TAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTT 1084
Query 54315 TTGCGGTTTTTGCACCGCCGCCCAAGGATCATGGATGGCTACTTTAAAATCCGACCGGCC 54374
||| |||||||| | || ||||| ||||| ||||| | ||||| || ||| |||||
Sbjct 1085 TTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCC 1144
Query 54375 AGCGCAAGATCTTTGTAGAGCTTCAAAACTGCCCGGTATAGTTTTTAAACTGTCATTTAT 54434
|| || | ||| || |||| |||||||| || |||||| || ||||||||
Sbjct 1145 GCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATTTAT 1204
Query 54435 TCCGTCGCCGCCGCAAATTGGCACAAAACCGTACAAAAGATGCGTCAAATTAGGCACGGG 54494
||||| ||||||||||| || | ||| || || | | ||| || | |||||| | ||
Sbjct 1205 GCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGG 1264
Query 54495 CACTTTGTCCATTGGAAAATTTCGTCCGTACACTCCCCATTCTACAAAATAGGCGGCCAC 54554
| |||| || || || | ||| || ||||||||||| || |||||| ||||
Sbjct 1265 TATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCGCCCAC 1324
Query 54555 AACTTT 54560
||||||
Sbjct 1325 AACTTT 1330
>seq117972
Length=685
Score = 176 bits (194), Expect = 4e-39
Identities = 177/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || || ||| | |||||||| ||||||||||| ||
Sbjct 272 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 213
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct 212 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 153
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | || || || ||||||||||| || || ||||||||||||||
Sbjct 152 CAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAAC 93
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||| || || || | |||||||| |||||| | || ||||| ||
Sbjct 92 ATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGTCTTCGTGGTGGAAT 43
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| ||||| || || ||||| | |||||| | ||||| ||| | ||
Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||||| ||||||||||||||||| || || ||||||
Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | ||| ||||| ||||||||||| || || |||| || ||||||
Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| || || || || ||||| || | ||||| | ||||| ||
Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGGAAT 271
Score = 100 bits (110), Expect = 2e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 27033 GAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGC 27092
|| || ||||| || ||| | ||||| | || || ||| || ||||||||||||||
Sbjct 683 GAGGTAGAACCATCTGACACTATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAAGGT 624
Query 27093 ATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACC 27152
|| || || || |||||| | | || | || || |||||| ||||||| | ||
Sbjct 623 ATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACA 564
Query 27153 GTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGT 27212
| || ||||| || ||||||||||| || || ||||||| || |||||| | || |||
Sbjct 563 CTATCTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTATTGCGTCTTCGTGGT 504
Query 27213 GGCAT 27217
|| ||
Sbjct 503 GGTAT 499
>seq218964
Length=932
Score = 163 bits (180), Expect = 2e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || || | |||||| | ||||| ||||| |||
Sbjct 640 ATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCC 699
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| |||||||||||||| |||||||| || || ||||||
Sbjct 700 GACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 759
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||| || || |||||||||||| | || |||| || ||||||
Sbjct 760 CAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTACAAC 819
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||| || || || | || |||| |||||| | || ||||| ||
Sbjct 820 ATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGTGGTGGAAT 869
>seq153336
Length=250
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||||||||| || || || || |||||||| | ||||||||| | ||
Sbjct 232 ATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTCT 173
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || ||| ||||||||||| |||||||| || || || |||
Sbjct 172 GATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAA 113
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | |||||| || ||| ||||||| | || | || || || |||
Sbjct 112 CAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAAC 53
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || || || || || |||||| | ||||||| ||
Sbjct 52 ATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTAAGGGGTGGAAT 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433210701876182
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |