Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq21365 268 8e-67 seq117972 176 4e-39 seq218964 163 2e-35 seq153336 127 2e-24 >seq21365 Length=2821 Score = 268 bits (296), Expect = 8e-67 Identities = 791/1206 (66%), Gaps = 24/1206 (2%) Strand=Plus/Plus Query 53367 ACCCTTGTGTATCGCATTCAAAAGATCTCCGTTGTCCGCGTCGATTTCCCACGCAAACAA 53426 |||| ||| || ||||||| ||||| |||||||| |||||||||||||| ||||| | Sbjct 137 ACCCATGTTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAG 196 Query 53427 TCCACCGAGATCGTTTTCAATCACATACTGGCCCTTGTCTAGCACGGAATCGATGC--TG 53484 ||||| || | ||| | ||||||| | ||||| || | || || || | || || Sbjct 197 ACCACCTAGTTTGTTATTTCTCACATATTTACCCTTTTCAATAACTGA-TCTA-GCATTG 254 Query 53485 TCGTAACTGATTAAATCGCCAGAGTTTTTAT----TGAATACAAACGCTGCTTTGGCTGT 53540 || || | | | || |||| || || |||| ||| | | |||| ||| Sbjct 255 TCATAGGTTACAAGGTCTCCAG----TTGATGGTCTGAAGACATAAGGAGCTTGGGCGAC 310 Query 53541 AGTGTCGTAAGTGTAAT--CGTATTGA--TGGCCAATTTT-TTCGTCAATTTTTCGGTAA 53595 | |||||||| || ||| | ||| || |||||| |||| |||| | || |||| Sbjct 311 ATTGTCGTAA-TGAAATTCCCACTTGCCTTGAGCAATTTCATTCG-CAATCTCTCTGTAA 368 Query 53596 TCAACGACTCCGTCTTCCCATGTGCCTGTAACAGGGCCAGTTGCCACACCGGTGAACGGA 53655 ||||| |||||||||| ||| || ||| | ||||| ||||| || || ||||| ||| Sbjct 369 TCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGA 428 Query 53656 TTGTCATCGCGGTAGCCGCTCACTCCAGTCCAACCGCGCCCGTACATCGCCACTCCGAGA 53715 ||| || ||| | || ||||||||||| || || ||||| || || || | Sbjct 429 ATGTTGTCTTCGTAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTAAT 488 Query 53716 ACAATTTTTTCCTGTTGAACTTTTTGTTCGAGCAACGCGCGCACGGCAACATCGGCCGTG 53775 ||||| || | | | ||| ||| | | ||| || | | || | ||| Sbjct 489 ACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTG 548 Query 53776 TAATGCTCGCTGGGAGACCAAACCGGCGCGTAAATCGCCGTTTGATGTCCCAAATCGGTG 53835 ||| || ||||| ||| | |||||||| | | ||||||||||| | | Sbjct 549 TAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCA 608 Query 53836 TTTGACCAAGCGCCTTTAAAATCATACGACATTaaaaaaaTTCTGTCCAGGTATTGTTGG 53895 |||||||| || || || || ||||| ||| || ||||| |||| || | ||| Sbjct 609 TTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGA 668 Query 53896 GCGTCGCGATAGTTGACGACCGCAATTTTATCATTGCCTGCACTGATTGCGCTAGTCAAC 53955 || | || |||| || || |||||||| || | || || || |||||| Sbjct 669 GCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAAT 728 Query 53956 TCGAACTTTCGT-CCAGTTTCCAATTCCAATTGATCCAACATTTGTCGCAACTCTTTTAA 54014 ||| | |||| | ||| | | | | | ||| | ||| | || || ||||| | Sbjct 729 TCGTA-TTTCTTGCCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCAT 787 Query 54015 CAACACCACATACGTTAAACTATCTTTTTGAGGATCGCCCACGGACGGATTGGCACCGTT 54074 ||| ||||| || ||||| | | | || | | || || ||||| || Sbjct 788 CAAACTTACATAACAATCACCATCTTCTGGGCTACCG---AGGTCAGGGTTAGCACCTTT 844 Query 54075 TCCGCCAGGAAACTCCCAATCGACGTCGACACCATCAAAAAATTTCCACGTCAATAGGAA 54134 || ||||||||||||||||||| || |||||||| || |||||||| || | || || Sbjct 845 ACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAA 904 Query 54135 TTCGCGCACGGAATCCACAAACACTTTGCGTTTGGAAGAATCGTGGAAATGGTAAAACGG 54194 || || || | |||||| | | | ||| || || ||| | | || || Sbjct 905 CTCCTTTACTGACTGCACAAATCGTGTTCTTTTAGATTTGTCAACTAAAAAGAAGAAAGG 964 Query 54195 ATCCGATAACGTCCAACCGCCGATTGACGGTAATACTTTGACGTTGGGATTCGCTTTTTT 54254 ||| | | |||||| || || || || || | | || | | || |||| ||| Sbjct 965 ATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTTT 1024 Query 54255 CACGGCCATAATCTGTCCAAAATTGCCTTTATACGGTTCGTTCCAGGCGGAGACGCCTTT 54314 | | ||| | || ||||| |||||||| || || |||||||| | || | ||||| Sbjct 1025 TAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTT 1084 Query 54315 TTGCGGTTTTTGCACCGCCGCCCAAGGATCATGGATGGCTACTTTAAAATCCGACCGGCC 54374 ||| |||||||| | || ||||| ||||| ||||| | ||||| || ||| ||||| Sbjct 1085 TTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCC 1144 Query 54375 AGCGCAAGATCTTTGTAGAGCTTCAAAACTGCCCGGTATAGTTTTTAAACTGTCATTTAT 54434 || || | ||| || |||| |||||||| || |||||| || |||||||| Sbjct 1145 GCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATTTAT 1204 Query 54435 TCCGTCGCCGCCGCAAATTGGCACAAAACCGTACAAAAGATGCGTCAAATTAGGCACGGG 54494 ||||| ||||||||||| || | ||| || || | | ||| || | |||||| | || Sbjct 1205 GCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGG 1264 Query 54495 CACTTTGTCCATTGGAAAATTTCGTCCGTACACTCCCCATTCTACAAAATAGGCGGCCAC 54554 | |||| || || || | ||| || ||||||||||| || |||||| |||| Sbjct 1265 TATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCGCCCAC 1324 Query 54555 AACTTT 54560 |||||| Sbjct 1325 AACTTT 1330 >seq117972 Length=685 Score = 176 bits (194), Expect = 4e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || ||| | |||||||| ||||||||||| || Sbjct 272 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 213 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct 212 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 153 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || ||||||||||| || || |||||||||||||| Sbjct 152 CAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAAC 93 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | |||||||| |||||| | || ||||| || Sbjct 92 ATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGTCTTCGTGGTGGAAT 43 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || ||||| | |||||| | ||||| ||| | || Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||||| ||||||||||||||||| || || |||||| Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| ||||| ||||||||||| || || |||| || |||||| Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || || ||||| || | ||||| | ||||| || Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGGAAT 271 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 27033 GAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGC 27092 || || ||||| || ||| | ||||| | || || ||| || |||||||||||||| Sbjct 683 GAGGTAGAACCATCTGACACTATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAAGGT 624 Query 27093 ATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACC 27152 || || || || |||||| | | || | || || |||||| ||||||| | || Sbjct 623 ATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACA 564 Query 27153 GTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGT 27212 | || ||||| || ||||||||||| || || ||||||| || |||||| | || ||| Sbjct 563 CTATCTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTATTGCGTCTTCGTGGT 504 Query 27213 GGCAT 27217 || || Sbjct 503 GGTAT 499 >seq218964 Length=932 Score = 163 bits (180), Expect = 2e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || || | |||||| | ||||| ||||| ||| Sbjct 640 ATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCC 699 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||||||||||| |||||||| || || |||||| Sbjct 700 GACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 759 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | ||| || || |||||||||||| | || |||| || |||||| Sbjct 760 CAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTACAAC 819 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | || |||| |||||| | || ||||| || Sbjct 820 ATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGTGGTGGAAT 869 >seq153336 Length=250 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||||||||| || || || || |||||||| | ||||||||| | || Sbjct 232 ATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTCT 173 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || ||| ||||||||||| |||||||| || || || ||| Sbjct 172 GATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAA 113 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | |||||| || ||| ||||||| | || | || || || ||| Sbjct 112 CAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAAC 53 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || || || || || |||||| | ||||||| || Sbjct 52 ATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTAAGGGGTGGAAT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433210701876182