Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq117972 152 1e-31 seq218964 149 1e-30 seq153336 145 2e-29 seq131538 100 7e-16 seq117971 95.1 3e-14 >seq117972 Length=685 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 |||||||| || |||||||| ||||| ||||| | ||| || | |||||||||| ||| Sbjct 70 TGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATCTTCCAATTGC 129 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||||||||| || || ||||| || | || || ||||| ||||| || Sbjct 130 TTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTA 189 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||| || || |||||| ||| || || ||||| || |||||||| || Sbjct 190 GCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTTCCAGTT 249 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 || || || ||||| | ||||||| Sbjct 250 AGGGTTTTAACAAAAATCTGCATT 273 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || |||||||||||||| || || | ||| || | |||||||||| |||||||| Sbjct 303 AGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGCTTGCC 362 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||||| ||||| |||||||| || ||||||| ||||| ||||| ||||| || || Sbjct 363 CGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTT 422 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || ||||| || ||||||||| |||||| || | ||| || || || || || || || Sbjct 423 TACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTGCCAGTAAGTGT 482 Query 211097 CTTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 483 TTTAACAAAAATTTGCAT 500 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| || || ||||| || |||||||| | || || | ||||||||||| || Sbjct 526 TGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCTTCCAGTTGT 585 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || || || | |||||||| || |||| ||||| ||||| ||||||||| Sbjct 586 TTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGGATCTTT 645 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||| ||||| || |||||||| ||| ||||| Sbjct 646 GCCTTCACATTTTCAATAGTGTCAGATGGTTCTACCTC 683 >seq218964 Length=932 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||||||||| || |||||||| ||||| || || | ||| || | || |||||| Sbjct 848 ACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGGCCGTCTTCC 789 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | ||||| || ||||| || | |||||||| || ||||||| ||||||||||| || Sbjct 788 AATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGA 729 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 || || ||| || ||||| || ||||| || |||||| || | ||| || || || Sbjct 728 ATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTA 669 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||||| || || || || | ||||||||| Sbjct 668 CCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637 >seq153336 Length=250 Score = 145 bits (160), Expect = 2e-29 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || || || ||||||||||| |||| || || | ||||||||||| || Sbjct 29 GTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATCTTCCAGTTG 88 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || | | ||||||||| ||||||| ||||||||||| || ||||| Sbjct 89 CTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCTTGAATCTT 148 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | || || |||||||| || ||||| ||| || || | ||| || || ||||| || Sbjct 149 TGCCTTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAATAGTTTTTCCAGT 208 Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115 || || |||||||| | |||||| Sbjct 209 TAGTGTTTTTACAAAAATTTGCATT 233 >seq131538 Length=717 Score = 100 bits (110), Expect = 7e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || |||||||||||||| || ||||| || || || ||||| | | || | | Sbjct 148 AGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCGT 89 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| || ||||| || || || || | | |||||||| ||||||| ||||| Sbjct 88 CCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATGCCTTCT 29 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTT 211044 |||||||| || ||| || || |||| Sbjct 28 TTGTCCTGAATTTTTGCCTTAACATTTT 1 >seq117971 Length=252 Score = 95.1 bits (104), Expect = 3e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || || | ||| ||||| ||||| || ||||| ||||||||||| || |||| | || Sbjct 115 CGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAAGTA 56 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 | |||||||||| ||||||||| || ||||| || |||||||| || || |||| Sbjct 55 CGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGGGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1154358278364510