Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq153336 140 8e-28
seq117972 132 1e-25
seq218964 131 4e-25
seq42689 107 5e-18
seq1124 91.5 3e-13
seq309445 84.2 5e-11
>seq153336
Length=250
Score = 140 bits (154), Expect = 8e-28
Identities = 154/205 (75%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| | ||| ||||| || |||| || || || | || || | ||||||||| || ||
Sbjct 29 GTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATCTTCCAGTTG 88
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| || ||||| || | || ||||||||| || ||||| |||||||||||||| |||||
Sbjct 89 CTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCTTGAATCTT 148
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
| ||| ||| |||||| || || || | |||||| ||||| || || || || || ||
Sbjct 149 TGCCTTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAATAGTTTTTCCAGT 208
Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714
| ||||||| || | |||||||
Sbjct 209 TAGTGTTTTTACAAAAATTTGCATT 233
>seq117972
Length=685
Score = 132 bits (146), Expect = 1e-25
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575
||| ||||||||||||| ||||| || | | || | |||||||| | ||||| ||
Sbjct 303 AGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGCTTGCC 362
Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635
||||| ||||| |||||||| || || ||||| ||||| ||||||||||| || |||
Sbjct 363 CGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTT 422
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
||| ||| || ||||| |||| ||| || ||||| || || || ||||| || | ||
Sbjct 423 TACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTGCCAGTAAGTGT 482
Query 225696 TTTTATGAACACTTGCAT 225713
||| | || | ||||||
Sbjct 483 TTTAACAAAAATTTGCAT 500
Score = 122 bits (134), Expect = 2e-22
Identities = 163/224 (73%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | || ||||| ||||||||||| | |||||||||| | |||
Sbjct 51 ACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGT 110
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| | ||||| ||||| |||||||| || || || || || || || ||
Sbjct 111 GCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCC 170
Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
|| ||||||||||| ||| || || ||| ||| || || || |||| |||||| || |
Sbjct 171 CTCTTTGTCTTGGAT-TTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCA 229
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || ||||| || || | ||||| | || | ||||||
Sbjct 230 GAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | || ||||| ||||| ||||| | ||| ||||| | | ||
Sbjct 507 ACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGT 566
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || || || ||||| || || || | |||||||| || ||||||||
Sbjct 567 ACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACC 626
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
||| ||||||||||||||| ||||||| ||| || ||||| || | ||| || ||||
Sbjct 627 TTCTTTGTCTTGGATCTTTGCCTTCACATTTTCAATAGTGTCAGATGGTTCTACCTCTA 685
>seq218964
Length=932
Score = 131 bits (144), Expect = 4e-25
Identities = 166/226 (73%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || ||||| ||||| ||||||||||| | ||||| || | | |||
Sbjct 861 ACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGT 802
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||||| | ||||| |||||||| || | |||||||| || || ||||| ||
Sbjct 801 GCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCC 742
Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
|||||||||||| || ||| || || ||| ||| || ||||| || | ||| || || |
Sbjct 741 TTCCTTGTCTTGAAT-TTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCA 683
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| || || || || ||||| | ||||| | ||| | ||||||||
Sbjct 682 AAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637
>seq42689
Length=544
Score = 107 bits (118), Expect = 5e-18
Identities = 96/119 (81%), Gaps = 1/119 (1%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|||||||| ||||| | ||||| || | ||| || | |||||||||||||| || |||
Sbjct 124 GTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCA 65
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635
|| ||||| | ||||| ||||| || |||||||||||||| |||||||| ||| ||||
Sbjct 64 GCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGAT-TTTAGCTT 7
>seq1124
Length=8581
Score = 91.5 bits (100), Expect = 3e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732
|| || || ||||||||||| ||||||||||| || | ||||| || ||||| ||||
Sbjct 986 TCTGGGTGCCCAAAAAATCAAAATAAATGTTGGTATAAAATAGGGTCACCTCCTCCTGCG 927
Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772
|| |||||||| |||||| ||||||| ||||||||||
Sbjct 926 GGGTCAAAAAATGAAGTATTTAAATTTCGGTCAGTTAAAA 887
>seq309445
Length=315
Score = 84.2 bits (92), Expect = 5e-11
Identities = 95/126 (75%), Gaps = 1/126 (1%)
Strand=Plus/Minus
Query 7737 GGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTC 7796
|||||| |||| ||||| ||| |||||| || ||| |||| |||||| | | |
Sbjct 267 GGTAAGGTTCTACGCGTTGCATCGAATTAATCCGCATGCTCCGCCGCTTGTGCGGGGCCC 208
Query 7797 CGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGCG 7855
||||| || |||||||||||| |||||||| |||| | | |||| || || || | |||
Sbjct 207 CGTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGGGGTACTTAAAGCG 148
Query 7856 TTAGCT 7861
||||||
Sbjct 147 TTAGCT 142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1187599437285156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |