Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq21365 228 7e-55 seq117972 104 2e-17 seq131538 82.4 6e-11 >seq21365 Length=2821 Score = 228 bits (252), Expect = 7e-55 Identities = 637/966 (66%), Gaps = 21/966 (2%) Strand=Plus/Minus Query 109140 CGCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTT 109199 ||| ||||| || ||||||||||| ||| | || || |||||||| | || | Sbjct 1319 CGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTATACCTAT 1260 Query 109200 GCCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAA 109259 || ||| | | |||||||| || || |||||||| || || ||||| |||||||| || Sbjct 1259 ACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAA 1200 Query 109260 CGACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCG 109319 || | | ||| || |||||||| | || ||||||| || || |||| || Sbjct 1199 TGATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCG 1140 Query 109320 CGACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGG 109379 || || |||||||| || || ||||| ||||| || | |||||||| |||||||| Sbjct 1139 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 1080 Query 109380 CGTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATT 109439 || | | ||||||||||| ||||||||||||||||| ||||| ||| | ||| Sbjct 1079 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACA 1020 Query 109440 GGCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACG-TTGTCGGACCCGT 109498 || ||| | | || ||||| || || || || ||||||||| ||| || || | Sbjct 1019 AGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTTT 960 Query 109499 TTTATTTT--ATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATT 109556 || |||| | || | | | |||||| | ||| || | || || || || Sbjct 959 CTTCTTTTTAGTTGACAAAT---CTAAAAGAACACGATTTGTGCAGTCAGTAAAGGAGTT 903 Query 109557 TTTACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAA 109616 | | | | ||||||||||| || || || || || |||||||||||||| || || || Sbjct 902 TCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGTAA 843 Query 109617 GGGTGCCAATCCGAGTCTCGGCGACGCA-ACGCGCGACAGCAAAACGTACATTGCGTTGT 109675 ||||| || || ||||| | || | | | | | ||| | ||| Sbjct 842 AGGTGCTAACCCTGACCTCGGTAGCCCAGAAGATGGTGATTGTTATGTAAGT----TTGA 787 Query 109676 TAAAAGAGTTGCGCGCCATGTTGGACGACTTGCAAACGGCCACCAA---CAAAACGTACG 109732 | ||||| || || | ||| | || || || | || | || ||| | |||| Sbjct 786 TGAAAGAATTACGTGAGATGCTCGATGA---GCTCTCAGCTAAGAATGGCAAGAAATACG 730 Query 109733 AATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTACGCGTCGG 109792 ||||||| || |||||| | || | |||||||| | || || || |||| || Sbjct 729 AATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAGG 670 Query 109793 CGCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAA 109852 | ||| | ||| |||| | || || || |||| || || ||||| || || ||||||| Sbjct 669 CTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTGGTCAA 610 Query 109853 ACACGGACT-TAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAATTG 109911 | ||| | || |||| || | |||||||||| | |||||||| || ||| Sbjct 609 A-TGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAACT 551 Query 109912 TACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaaTT 109971 ||||| | || | | || ||| | |||| ||| |||| ||||| || ||| Sbjct 550 TACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATCCTAAGAAGATT 491 Query 109972 ATAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCG-TCGTGCACGCCGACGACGC 110030 || | || || || ||||| || || || ||||| |||| || || | ||| ||| Sbjct 490 GTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATG-ATTACGAAGACAA 432 Query 110031 GAATCCGTTTTTGGGCATCGCCTCCGGTCCCGTGGAAGGCACTTGGGAAAACGGCGTGGT 110090 | ||| || |||| ||| | || || || |||| |||||| || |||| ||||| Sbjct 431 CATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGTGGT 372 Query 110091 GGACTA 110096 || || Sbjct 371 TGATTA 366 >seq117972 Length=685 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAATT 101093 |||||||| ||||||||||| || ||||| || | | ||| | || ||||||||||| Sbjct 298 TGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG--AAAGTGTACGACCATCTTCCAATT 355 Query 101094 GTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTT 101153 | |||||||| | ||||| | |||||| ||| || | |||||||||||| |||| Sbjct 356 GCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTT 415 Query 101154 TTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCG 101213 | || |||| | | || || | || ||| | ||||| |||||||| | Sbjct 416 TAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTGCCAG 475 Query 101214 TCAATGTTTTAATAAAAATTTGCAT 101238 | | |||||||| |||||||||||| Sbjct 476 TAAGTGTTTTAACAAAAATTTGCAT 500 >seq131538 Length=717 Score = 82.4 bits (90), Expect = 6e-11 Identities = 107/146 (73%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| || ||| | || | ||| | ||| |||||||| |||||||||||||| | Sbjct 157 CCACCTCTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAG-- 100 Query 101072 ATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129 ||| | || | |||||| | ||| || || ||| | || | ||| ||||||||| | Sbjct 99 ATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAG 40 Query 101130 GCACGCCTTCTTTGTCGGCAATTTTT 101155 | | |||||||||||| ||||||| Sbjct 39 GAATGCCTTCTTTGTCCTGAATTTTT 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408049273016466