Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 228 7e-55
seq117972 104 2e-17
seq131538 82.4 6e-11
>seq21365
Length=2821
Score = 228 bits (252), Expect = 7e-55
Identities = 637/966 (66%), Gaps = 21/966 (2%)
Strand=Plus/Minus
Query 109140 CGCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTT 109199
||| ||||| || ||||||||||| ||| | || || |||||||| | || |
Sbjct 1319 CGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTATACCTAT 1260
Query 109200 GCCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAA 109259
|| ||| | | |||||||| || || |||||||| || || ||||| |||||||| ||
Sbjct 1259 ACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAA 1200
Query 109260 CGACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCG 109319
|| | | ||| || |||||||| | || ||||||| || || |||| ||
Sbjct 1199 TGATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCG 1140
Query 109320 CGACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGG 109379
|| || |||||||| || || ||||| ||||| || | |||||||| ||||||||
Sbjct 1139 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 1080
Query 109380 CGTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATT 109439
|| | | ||||||||||| ||||||||||||||||| ||||| ||| | |||
Sbjct 1079 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACA 1020
Query 109440 GGCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACG-TTGTCGGACCCGT 109498
|| ||| | | || ||||| || || || || ||||||||| ||| || || |
Sbjct 1019 AGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTTT 960
Query 109499 TTTATTTT--ATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATT 109556
|| |||| | || | | | |||||| | ||| || | || || || ||
Sbjct 959 CTTCTTTTTAGTTGACAAAT---CTAAAAGAACACGATTTGTGCAGTCAGTAAAGGAGTT 903
Query 109557 TTTACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAA 109616
| | | | ||||||||||| || || || || || |||||||||||||| || || ||
Sbjct 902 TCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGTAA 843
Query 109617 GGGTGCCAATCCGAGTCTCGGCGACGCA-ACGCGCGACAGCAAAACGTACATTGCGTTGT 109675
||||| || || ||||| | || | | | | | ||| | |||
Sbjct 842 AGGTGCTAACCCTGACCTCGGTAGCCCAGAAGATGGTGATTGTTATGTAAGT----TTGA 787
Query 109676 TAAAAGAGTTGCGCGCCATGTTGGACGACTTGCAAACGGCCACCAA---CAAAACGTACG 109732
| ||||| || || | ||| | || || || | || | || ||| | ||||
Sbjct 786 TGAAAGAATTACGTGAGATGCTCGATGA---GCTCTCAGCTAAGAATGGCAAGAAATACG 730
Query 109733 AATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTACGCGTCGG 109792
||||||| || |||||| | || | |||||||| | || || || |||| ||
Sbjct 729 AATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAGG 670
Query 109793 CGCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAA 109852
| ||| | ||| |||| | || || || |||| || || ||||| || || |||||||
Sbjct 669 CTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTGGTCAA 610
Query 109853 ACACGGACT-TAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAATTG 109911
| ||| | || |||| || | |||||||||| | |||||||| || |||
Sbjct 609 A-TGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAACT 551
Query 109912 TACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaaTT 109971
||||| | || | | || ||| | |||| ||| |||| ||||| || |||
Sbjct 550 TACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATCCTAAGAAGATT 491
Query 109972 ATAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCG-TCGTGCACGCCGACGACGC 110030
|| | || || || ||||| || || || ||||| |||| || || | ||| |||
Sbjct 490 GTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATG-ATTACGAAGACAA 432
Query 110031 GAATCCGTTTTTGGGCATCGCCTCCGGTCCCGTGGAAGGCACTTGGGAAAACGGCGTGGT 110090
| ||| || |||| ||| | || || || |||| |||||| || |||| |||||
Sbjct 431 CATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGTGGT 372
Query 110091 GGACTA 110096
|| ||
Sbjct 371 TGATTA 366
>seq117972
Length=685
Score = 104 bits (114), Expect = 2e-17
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAATT 101093
|||||||| ||||||||||| || ||||| || | | ||| | || |||||||||||
Sbjct 298 TGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG--AAAGTGTACGACCATCTTCCAATT 355
Query 101094 GTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTT 101153
| |||||||| | ||||| | |||||| ||| || | |||||||||||| ||||
Sbjct 356 GCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTT 415
Query 101154 TTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCG 101213
| || |||| | | || || | || ||| | ||||| |||||||| |
Sbjct 416 TAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTGCCAG 475
Query 101214 TCAATGTTTTAATAAAAATTTGCAT 101238
| | |||||||| ||||||||||||
Sbjct 476 TAAGTGTTTTAACAAAAATTTGCAT 500
>seq131538
Length=717
Score = 82.4 bits (90), Expect = 6e-11
Identities = 107/146 (73%), Gaps = 4/146 (3%)
Strand=Plus/Minus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| || ||| | || | ||| | ||| |||||||| |||||||||||||| |
Sbjct 157 CCACCTCTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAG-- 100
Query 101072 ATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129
||| | || | |||||| | ||| || || ||| | || | ||| ||||||||| |
Sbjct 99 ATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAG 40
Query 101130 GCACGCCTTCTTTGTCGGCAATTTTT 101155
| | |||||||||||| |||||||
Sbjct 39 GAATGCCTTCTTTGTCCTGAATTTTT 14
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408049273016466
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |