Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5177 565 3e-156 seq228136 102 1e-16 seq197295 96.9 5e-15 seq213871 86.0 9e-12 >seq5177 Length=4331 Score = 565 bits (626), Expect = 3e-156 Identities = 1098/1609 (68%), Gaps = 19/1609 (1%) Strand=Plus/Minus Query 76764 ATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAG 76823 |||||| || || | ||||||||||| | | | ||| |||||||| |||| ||| Sbjct 3775 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 3716 Query 76824 TACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAA 76883 ||||| || ||||||| ||||| |||| ||| |||||| || || ||||| | Sbjct 3715 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 3656 Query 76884 TAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 76943 || |||| | || | ||| || || | || |||||||| || || || ||||||||| Sbjct 3655 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCTA 3596 Query 76944 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 77003 ||||||||||| | ||| || || | | ||| ||||| | |||||| | | | | Sbjct 3595 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 3536 Query 77004 TTGATATCATCTGGAAGGTTTGTATTTT---GAATGGAACCACCATCTGATATAATTGTA 77060 | || || | || | ||| | ||| | || || ||| | ||||||| | Sbjct 3535 CTTATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGA 3476 Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCT-GTTAAAACTCTAAGGAGATGAGGATT 77119 || || ||||| |||| ||| || | | ||| || ||| | | || |||||| | || Sbjct 3475 TTTTTCATATCTTCATCCCATAAAT-CAGCTCGAGTCAAATCAGTCAGAAGATGATGGTT 3417 Query 77120 AACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTC 77179 |||| ||||||||||||| || ||||| | ||||||||| ||| ||||||| Sbjct 3416 CACTACAGGAAATTCTCCAGATAAAACTCTTCTTTGGTAAATATTTGATGTAAATGGTTC 3357 Query 77180 CACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAA 77239 | ||||||| |||| || | |||||| |||||||| ||||| ||||||||||| | ||| Sbjct 3356 AAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCAA 3297 Query 77240 TAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAG 77299 || | ||| | | ||||||| || || || ||||| || ||| |||||||| Sbjct 3296 TAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTCCCAAAG 3237 Query 77300 ATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCC 77359 |||| ||| | ||| | ||| || || || || || | ||||| ||| Sbjct 3236 GTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTTCC 3177 Query 77360 ATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCC 77419 | |||||| || | |||||| |||| |||| ||||||||| ||||| ||||| || Sbjct 3176 TTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACC 3117 Query 77420 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGG 77479 |||||||||||||| || || | | ||| || | ||||| ||| || | || Sbjct 3116 ATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAGG 3057 Query 77480 ATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538 || | | | | | ||| | |||||| | |||||||| |||||||| ||||| | | Sbjct 3056 -TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGACGGT 2998 Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598 | ||| |||| ||| |||| ||||| || | ||||||| | |||| || || | ||| | Sbjct 2997 GCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGT 2938 Query 77599 TGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCAT 77658 | | |||| | || | ||| | || |||| ||| |||| ||||| || Sbjct 2937 TTAAATTTTGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAACTAAATCGATTAT 2878 Query 77659 CTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGT 77718 | |||||||||||| | ||||| || || || || || ||||| || |||| | Sbjct 2877 TTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTG 2818 Query 77719 TGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTT 77778 | ||||| | | ||| || || ||||| |||||||| |||||||| ||||||| || Sbjct 2817 AAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTT 2758 Query 77779 GGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCT 77838 | || |||||| | ||||| | |||||||| | ||| | || || || || || | | Sbjct 2757 GATTACTCTTTCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCTCCACTT 2698 Query 77839 GTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTATCGCCT 77896 | | ||| |||||||| ||||| | ||||| |||| | | | | ||| || | | Sbjct 2697 GAGCTTCTATAATAGACTTCCATA--ACTCTTGAGCTCTGAC--TCGTTTTATAAACCGT 2642 Query 77897 CTCTCTT--TCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAAT 77954 | |||| ||||||| | |||||| ||| ||||| ||||| || ||| | | Sbjct 2641 TTTTCTTCTTCATATTTGGCATATAGGGCTTCGAATTCCTCTCCGTAACAGTCAGCGAGG 2582 Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 ||||| || |||| || ||||| | ||| || |||| | | || | ||||||| Sbjct 2581 CCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACCCTTTTCATA 2522 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || ||||| |||||||||| |||| ||| || |||| | ||| |||||| || ||| Sbjct 2521 AACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCT 2462 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 || |||||||| | ||| | ||||| | || || | |||||| || |||| || ||| Sbjct 2461 GTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAATT 2402 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || ||||| || || || ||||||| ||||||||| || || || || Sbjct 2401 GCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGTAC 2342 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 |||||||||||||| | | ||| || || ||||| || |||| |||||| || Sbjct 2341 ACTCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACCCC 2282 Query 78255 CTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 || | ||| | | ||| || ||||| || || || ||||| |||| | Sbjct 2281 TGGGCTCTAATGCAATGTGTATG--TAAACCTATGCCACCGGCAGATTTAGAAATTAATG 2224 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCAT 78361 | || |||| || |||||| | ||||| || || || || || |||| Sbjct 2223 CACATTGTTTTAAAGTATCGAAAATACCTTCAATGCTATCGTCTTTCAT 2175 Score = 120 bits (132), Expect = 4e-22 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 |||||| ||||| |||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 1678 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 1619 Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652 | ||| ||||| || |||| ||| |||| | || ||| || |||| ||| Sbjct 1618 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 1568 Score = 93.3 bits (102), Expect = 6e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 78753 ttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812 || || || || || |||| ||| |||| |||||||| ||||| | ||| ||||||||| Sbjct 1022 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 963 Query 78813 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTT 78872 ||||| | ||| || ||| ||||| ||||| || |||| | |||| | ||| |||| Sbjct 962 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 903 Query 78873 GTGACCCCATTATATA 78888 || || ||| ||||| Sbjct 902 GTTACACCAGAATATA 887 >seq228136 Length=1993 Score = 102 bits (112), Expect = 1e-16 Identities = 233/350 (67%), Gaps = 3/350 (1%) Strand=Plus/Minus Query 170984 CCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTAAAAAATTTCCATCTGGA 171043 || |||||||||||| | || | || ||| | | ||| | ||||||| |||| ||| Sbjct 747 CCAATGTTAGCAGAAGCTTGCAAATCAGTTGAAATGGCTATGAAAAAATGTCCAAATGGC 688 Query 171044 ATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTCATAAAAACAATAATAAT 171103 |||||| | || ||||||||||||| ||||| || ||||| |||||||| ||| | Sbjct 687 ATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGTCCATAAAAAGGGAAATGAG 628 Query 171104 TTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTACCACATAAAGTTGATTATCTCAAG 171163 || | ||| | | | | ||||| || | | || |||||| | || | || Sbjct 627 TTCAAATATTTTTCCCGTGCCTTAAAACCGGTAATGGCTCACAAAGTTAGTCATTTTAAA 568 Query 171164 GAATACCTTCCTAAAGCATTTAAAAAAGCTACCTCTATTATCTTGGATTCCGAAATTGTT 171223 || || | |||||||||||| |||| | | | || |||||| | ||| | || Sbjct 567 GATTATTTACCTAAAGCATTTCCTAAAGGAGCTGATTTGATTTTGGATGCTGAAGTACTT 508 Query 171224 CTAGTTGATGAACATAATG---TTCCACTTCCGTTTGGAAGTCTAGGAATACACAAAAAG 171280 | ||||||| ||| || ||| | || ||||| | |||| || |||||| | Sbjct 507 ATGGTTGATGTCAATACTGGAAAACCATTGCCTTTTGGCACATTAGGTATTCACAAACAA 448 Query 171281 AAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCTTTGATTGTTTATA 171330 ||| | ||| ||||| | | ||||| | | |||||||| ||||| Sbjct 447 TCAGAATTTAAAGATGCTCAAGTTTGTTTATATATATTTGATTGCTTATA 398 >seq197295 Length=1118 Score = 96.9 bits (106), Expect = 5e-15 Identities = 88/110 (80%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671 |||| | | ||| ||| |||| ||||||||||| || |||||||| ||||| || ||| Sbjct 407 CAGTAAGTAATACCTTA-GATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCT 349 Query 48672 TTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 ||||||||||| | |||||| || |||||||||||||| ||||| || Sbjct 348 TTTTTATACATCTGCCATATGTCGGGATATTGGATTGGGAATATAACGAA 299 >seq213871 Length=423 Score = 86.0 bits (94), Expect = 9e-12 Identities = 167/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 48142 ATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGAC 48201 || |||||| || | | |||| |||| ||| ||| | ||| || || || | | Sbjct 374 ATTCAAAATTACTAATCATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATC 316 Query 48202 CGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT-CCAGAAAAGAAT 48260 ||||||| | || |||||||| | ||||||||||| || |||| | || || || ||| Sbjct 315 CGGGCATCAAGCCTCGTTTTTTCAACCAAAATATTGAAGC-AAAGCTGCCTGAGAAAAAT 257 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC---TTCGTTGTGT 48317 || || || || |||||||| ||| ||| | ||||| | |||| | | || Sbjct 256 ATTCCCTCAACCGCCGCAAAAGCGATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCG 197 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 |||||| || ||||| || ||||||||||| | ||| || | || || || ||||| Sbjct 196 ATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAATACATGGTAGAGTCTCAATTGCATTG 137 Query 48378 AA 48379 || Sbjct 136 AA 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691866037159360