Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq218964 120 7e-22
seq117972 109 1e-18
seq131538 105 2e-17
seq153336 93.3 1e-13
>seq218964
Length=932
Score = 120 bits (132), Expect = 7e-22
Identities = 156/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| || ||||||||||| |||||||| |||||||| || | | ||| | || |||||
Sbjct 848 ACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGGCCGTCTTCC 789
Query 151956 AG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTT 152013
| ||||| || ||||| || | | || || || | | || |||||||| ||||
Sbjct 788 AATTGCTTT--CCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTT 731
Query 152014 GAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTT 152073
||||||| ||| ||| | || | |||| ||| || ||||| | |||||| ||||
Sbjct 730 GAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTT 671
Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| |||||||| || |||||||| | |||||||||
Sbjct 670 TACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637
>seq117972
Length=685
Score = 109 bits (120), Expect = 1e-18
Identities = 154/215 (72%), Gaps = 1/215 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
|||||||||||| |||||||| ||||||||||||| | ||| | |||||||| |
Sbjct 69 ATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATCTTCCAATTG 128
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
|| || || |||||||| | |||||| || | | ||| || || || ||||| |||||
Sbjct 129 CTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTT 188
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
||| ||| | || | | || || || ||||| |||||||| || || || ||
Sbjct 189 AGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTTCCAGT 248
Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTACC-CTTA 152114
|| || || || || | ||||||| ||| ||||
Sbjct 249 TAGGGTTTTAACAAAAATCTGCATTCCACCTCTTA 283
>seq131538
Length=717
Score = 105 bits (116), Expect = 2e-17
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| |||||||| ||||| ||||||||||| ||||| || || |||||||| | ||| |||
Sbjct 151 CTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTT 92
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || || ||||| || || | |||||| ||||| | | || |||
Sbjct 91 CGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATGCCT 32
Query 152004 TCCTTTTCTTGAATTTTT 152021
|| || || |||||||||
Sbjct 31 TCTTTGTCCTGAATTTTT 14
>seq153336
Length=250
Score = 93.3 bits (102), Expect = 1e-13
Identities = 146/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTC 151964
|||||| || || |||||||| || || | | || | ||||||||| || |||||
Sbjct 35 AGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATCTTCCAGTTGCTTT-- 92
Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024
|||||||| || | || || ||||| | | || |||||||| |||||||| |||
Sbjct 93 CCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCC 152
Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084
|| ||| | || | | || ||| || ||||| | |||||||||||| || || ||
Sbjct 153 TTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAATAGTTTTTCCAGTTAGT 212
Query 152085 GTCTTCACGAAGACCTGCATTTTACCC 152111
|| || || || | |||||| ||||
Sbjct 213 GTTTTTACAAAAATTTGCATTCCACCC 239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1149049125765354
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |