Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq218964 120 7e-22 seq117972 109 1e-18 seq131538 105 2e-17 seq153336 93.3 1e-13 >seq218964 Length=932 Score = 120 bits (132), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || || ||||||||||| |||||||| |||||||| || | | ||| | || ||||| Sbjct 848 ACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGGCCGTCTTCC 789 Query 151956 AG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTT 152013 | ||||| || ||||| || | | || || || | | || |||||||| |||| Sbjct 788 AATTGCTTT--CCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTT 731 Query 152014 GAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTT 152073 ||||||| ||| ||| | || | |||| ||| || ||||| | |||||| |||| Sbjct 730 GAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTT 671 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | |||||||| || |||||||| | ||||||||| Sbjct 670 TACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637 >seq117972 Length=685 Score = 109 bits (120), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 |||||||||||| |||||||| ||||||||||||| | ||| | |||||||| | Sbjct 69 ATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATCTTCCAATTG 128 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || || |||||||| | |||||| || | | ||| || || || ||||| ||||| Sbjct 129 CTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTT 188 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | || | | || || || ||||| |||||||| || || || || Sbjct 189 AGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTTCCAGT 248 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTACC-CTTA 152114 || || || || || | ||||||| ||| |||| Sbjct 249 TAGGGTTTTAACAAAAATCTGCATTCCACCTCTTA 283 >seq131538 Length=717 Score = 105 bits (116), Expect = 2e-17 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||||||| ||||| ||||||||||| ||||| || || |||||||| | ||| ||| Sbjct 151 CTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTT 92 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || || ||||| || || | |||||| ||||| | | || ||| Sbjct 91 CGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATGCCT 32 Query 152004 TCCTTTTCTTGAATTTTT 152021 || || || ||||||||| Sbjct 31 TCTTTGTCCTGAATTTTT 14 >seq153336 Length=250 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTC 151964 |||||| || || |||||||| || || | | || | ||||||||| || ||||| Sbjct 35 AGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATCTTCCAGTTGCTTT-- 92 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 |||||||| || | || || ||||| | | || |||||||| |||||||| ||| Sbjct 93 CCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCC 152 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 || ||| | || | | || ||| || ||||| | |||||||||||| || || || Sbjct 153 TTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAATAGTTTTTCCAGTTAGT 212 Query 152085 GTCTTCACGAAGACCTGCATTTTACCC 152111 || || || || | |||||| |||| Sbjct 213 GTTTTTACAAAAATTTGCATTCCACCC 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1149049125765354