Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq117972 136 3e-27 seq218964 113 4e-20 seq2512 93.3 4e-14 seq153336 91.5 1e-13 >seq117972 Length=685 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| |||||||| ||||| | || || || |||||||| ||||| ||||||| Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| || ||| | |||||| ||||| |||||||| ||| | || ||||| Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || | ||||| | ||| || || |||||||||||| | ||| | ||||||| || Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || |||||||||||||| || ||||| || |||||||| || ||||| Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGTCTTCGTGGTGG 46 Score = 118 bits (130), Expect = 9e-22 Identities = 109/136 (80%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252 ||||||||||| ||||| || ||||| ||||| |||| ||| || |||||| ||||| Sbjct 635 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 576 Query 111253 GATT--CTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGT 111310 ||| | | ||||| | ||||||||||| ||||| |||||||| ||||||||||| | Sbjct 575 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 518 Query 111311 TGCGTCTGCGCGGTGG 111326 ||||||| || ||||| Sbjct 517 TGCGTCTTCGTGGTGG 502 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| ||||| | || |||||||| ||||| | ||| ||| || Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | ||||| ||||| |||||||||||| |||| |||||| Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111277 ||| | ||||||| |||||||| |||||||||||| || | ||| | | || || | Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTT--CTGACTACA 323 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 | || |||||||||||||| | |||||||| | ||| | | ||||| Sbjct 322 ACATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGG 274 >seq218964 Length=932 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 |||||||| ||||| || ||||| | || || ||||||||||| ||||| ||||| Sbjct 637 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 696 Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216 ||| || ||| | |||||| |||||| ||||| |||||| |||| ||| Sbjct 697 TCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 756 Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276 |||||| | | |||| || || || ||||||||||| ||| | | || || Sbjct 757 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTAC 816 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || |||||||||||||| || || | || |||||||| || ||||| Sbjct 817 AACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGTGGTGG 866 >seq2512 Length=3386 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 104735 AACGGGTTCTACTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTCTGCAAAGTGGAA 104794 ||||| ||||| || |||| |||| || ||||| ||||||||||| || ||||| ||| Sbjct 1499 AACGGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 1440 Query 104795 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCCGTAGATCATAAACGATGGGCGCCACAG 104854 || ||| ||| | | ||||||||| || || || || |||| |||||||| ||| Sbjct 1439 ATTATGAAATGGGTCGCGGGCGACGATCCCGCTAAGGACCACCAACGGTGGGCGCCCCAG 1380 Query 104855 TGCCCGTTTTTGCG 104868 ||||| || |||| Sbjct 1379 TGCCCCTTCCTGCG 1366 >seq153336 Length=250 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| ||||| | || || ||||| ||||| | ||| |||| | Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | | | | || || ||| ||| ||||| |||||| |||| || || Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||||| | |||| || || || ||| |||||||| || || | || ||||| Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAA 54 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || |||||||| | || |||||||||||||| | ||||| Sbjct 53 CATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTAAGGGGTGG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420151875674224