Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq197295 134 1e-26 seq213871 113 5e-20 >seq197295 Length=1118 Score = 134 bits (148), Expect = 1e-26 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 ||||||| || ||||||| |||| ||||| || ||||||| |||||| |||||||| | Sbjct 732 TTATATAAGTGTCAATTAATAAAGAGTACATCTCCGAATGAACATTTTCCATAGCAATTT 673 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896 |||| ||||| || || || ||||||| || |||||| || | | || | | | | Sbjct 672 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGCGAGAAACGCTCCACCA 613 Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956 | || || ||||||||||||||| ||| |||||||| || | |||| ||| ||||||| Sbjct 612 AGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAAT 553 Query 23957 GT 23958 || Sbjct 552 GT 551 >seq213871 Length=423 Score = 113 bits (124), Expect = 5e-20 Identities = 130/174 (75%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 ||||| || |||||| || | | ||| |||||||| ||| | |||||| || Sbjct 381 AATAATAATTCAAAATTACTAATCATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAA 323 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 |||||||| ||||| || ||||||||||| | ||||||||||| |||||| || || Sbjct 322 GTTAATCCGGGCATCAAGCCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 263 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 || || || |||||||| |||||||| || | || |||| |||||||| ||| Sbjct 262 AAAAATATTCCCTCAACCGCCGCAAAAGCGATAATACGTTCTCCAAATGTGGCA 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519383965403600