Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq21365 188 5e-43 seq218964 120 2e-22 seq117972 93.3 3e-14 >seq21365 Length=2821 Score = 188 bits (208), Expect = 5e-43 Identities = 783/1216 (64%), Gaps = 57/1216 (5%) Strand=Plus/Plus Query 5735 TGTTACCTA-ACCCTTGATTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCC 5793 ||||||| | |||| || ||||||| || | | || |||||||| |||||||||||| Sbjct 127 TGTTACCGAGACCCATG-TTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCC 185 Query 5794 CATCCAAATAGACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGAC 5853 || |||| ||||| || || || | | |||||||| ||||| | | || || Sbjct 186 CAAGCAAAGAGACCACCTAGTTTGTTATTTCTCACATATTTACCCTTTTCAATAACTGAT 245 Query 5854 CTCTCGTCGTCGTAGGTGACGAGATCGTC-GTTG-TGGT----ACACGTAGGGCGCTTGC 5907 || | | ||| ||||| || || || | |||| |||| | || || || ||||| Sbjct 246 CTAGCATTGTCATAGGTTACAAGGTCTCCAGTTGATGGTCTGAAGACATAAGGAGCTTGG 305 Query 5908 GCCACTCCGTCGTAAT-----------TCGGGTTGGG--ATACCGGTTCGTGATGTCTTT 5954 || || |||||||| | | ||| | || | |||| || ||| | Sbjct 306 GCGACATTGTCGTAATGAAATTCCCACTTGCCTTGAGCAATTTCA-TTCGCAATCTCTCT 364 Query 5955 GTAGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAA 6014 ||| || || || |||| || ||| | ||| || || || || || || |||||||||| Sbjct 365 GTAATCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAA 424 Query 6015 GGGATTGTTGT--TGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACG 6072 |||| |||||| | || || || | ||| ||| || | || |||||||| || Sbjct 425 GGGAATGTTGTCTTCGTAATCATGA--ACGCCAGTCCAACCACGACCATACATGGCAACA 482 Query 6073 CCCACCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGCG 6132 || | || | || || || ||||| | ||| | || | || || |||| | Sbjct 483 CCTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCA 542 Query 6133 GTGGTGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGA 6192 | ||||| |||| |||| ||||||| |||||||||| || || || |||| ||| Sbjct 543 GATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA 602 Query 6193 TCGGTGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATAC 6252 || ||||||||||||||||| || || |||| | |||||||||||||| ||| Sbjct 603 GTATCATTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAA 662 Query 6253 TCCTGCACCGCACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCGCTGATGGCGCTT 6312 | || || ||||| || ||||| | ||||| || | || ||| || || Sbjct 663 TTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAA 722 Query 6313 GTGA--GCAGA-TACTTGCGACCCGT-GC-GAGTCTCCAGACCGTCCAGCATGGACCTGA 6367 || | | | | ||||| | | | || ||| || | || ||||| | | Sbjct 723 GTCAATTCGTATTTCTTGCCATTCTTAGCTGAG-----AGCTCATCGAGCATCTCACGTA 777 Query 6368 GGTCGCCCAAGAGCGCTTGATAGGTGACGCCGTCGACTGTGACGTTTCCTAAGGCAGGAT 6427 || || | | ||| | || || ||| | | || | | |||| | Sbjct 778 ATTCTTTCATCAAACTTACATAACAATCACCATCTTCTG---GGCTACCGAGGTCAGGGT 834 Query 6428 TGGCTCCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTCCAAG 6487 | || || || || || ||||| |||||||| || || || || |||||||| ||||| | Sbjct 835 TAGCACCTTTACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATG 894 Query 6488 TTTCCAGAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCGTGTCGTTGAGCT 6547 || ||||| || | || || || || |||||||| |||| | Sbjct 895 TTAGGAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTTTTAGATTTGTCAACTAAAA 954 Query 6548 GGTAAAAGGGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGGTCAGAT----GC 6603 | | || |||||| |||||||||||||| |||||||| || || ||| | || Sbjct 955 AGAAGAAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGC 1014 Query 6604 GGATTGTGTTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTA----CATTTCCGA 6659 || | |||||| || | ||| | || || || || || ||||| |||| Sbjct 1015 GGGCT-TGTTTTAGT---GACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCAT 1070 Query 6660 GTAGGCCTCGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCGTGTATGGACAC 6719 | || | | || || || |||||||||| ||| ||||| |||||| || || || Sbjct 1071 GAAGAC----AATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGAC 1126 Query 6720 CTTGAAGTCGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACCTG 6779 |||||||| || || || || || || ||||| |||| ||| ||| | || Sbjct 1127 TTTGAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTC 1186 Query 6780 TTTCAGAGC-GTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCCGTACAGCAGAT 6838 ||| | ||| || || || || || || ||||| ||||| | || || || |||| || Sbjct 1187 TTTTA-AGCTATCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAAT 1245 Query 6839 GTGTGAGATTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTAAACACCCCACT 6898 | || ||||| || || || || | || |||| || | || ||| |||||||| | Sbjct 1246 GAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATT 1305 Query 6899 CCACGAAGTAAGCTCC 6914 | |||||||| || || Sbjct 1306 CTACGAAGTAGGCGCC 1321 >seq218964 Length=932 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | ||| ||||||||||| || || ||||| |||||||| || Sbjct 870 CATTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTC 811 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| |||| |||| ||||| || || || |||||||| || ||||||| Sbjct 810 TGAAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGG 751 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| || || ||| || | || | || ||||||| | ||| Sbjct 750 AGGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTC 691 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| || || |||||||| || |||||||| || ||||| Sbjct 690 AACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640 >seq117972 Length=685 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | ||| |||| ||||| || || ||||| ||||||||||| Sbjct 42 CATTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATC 101 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || |||| ||||| || |||||||| | ||||||||||| | Sbjct 102 GGAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGG 161 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || || || || || || || | || | || || || | || ||| Sbjct 162 TGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTC 221 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||| ||||| |||||||| || ||||| || || || || ||||| Sbjct 222 CACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358574266839558