Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq153336 136 9e-27 seq117972 136 9e-27 seq218964 127 5e-24 seq131538 93.3 1e-13 >seq153336 Length=250 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || ||||| || || |||||||| || || | || |||||| || || Sbjct 229 CAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTCTGAT 170 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||| ||||| ||||| || ||||| ||||| ||| Sbjct 169 ACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAACAA 110 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||||||||| || || |||||||| | || || | || |||||| || Sbjct 109 AGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAACATC 50 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 || || ||||| || |||| | || ||| | || || Sbjct 49 CAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTAAG 12 >seq117972 Length=685 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || ||||| || || ||||| || || || || || |||||| ||| || Sbjct 269 CAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCTGAT 210 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || || || |||||||| || ||||| || || ||||| Sbjct 209 ACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAGCAG 150 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || || | |||||||| | |||||| ||||||| ||| | Sbjct 149 CGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAACATT 90 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||||||||| || || ||| | || ||| Sbjct 89 CAAAAAGAATCTACTCTTCATTTGGTATTG 60 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || ||||| || || || ||||| || || | || || ||| ||| ||| Sbjct 497 CAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCTGAC 438 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || || || ||||||||||| || ||||| || || ||| Sbjct 437 ACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAACAA 378 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| ||||| || || || | |||||||| | || ||| | || || ||| || Sbjct 377 CGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAACATC 318 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||||||||| || ||||| Sbjct 317 CAAAAAGAATCTACTTTGCAT 297 Score = 96.9 bits (106), Expect = 8e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 177966 GAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGA 178025 ||||| ||| || ||||| || || || || || |||||| || ||||||||||| Sbjct 683 GAGGTAGAACCATCTGACACTATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAAGGT 624 Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 || || || ||||| || | || || || || |||||||| || |||||||| | || Sbjct 623 ATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACA 564 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || | |||||||| | ||||| ||||| || || ||| | || ||| Sbjct 563 CTATCTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTATTG 516 >seq218964 Length=932 Score = 127 bits (140), Expect = 5e-24 Identities = 160/219 (73%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| ||||| || ||||| || || | || || ||| Sbjct 637 AAAATGC---AGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAA 693 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||| || || || || ||| || ||||| ||||| ||||| || ||||| Sbjct 694 CCTTCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCA 753 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||||| | || ||||| ||||| || | ||||| || | |||||| | || Sbjct 754 GATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGAC 813 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || ||| | ||||||||||| || || || || || ||| Sbjct 814 TACAACATTCAAAAAGAATCTACTCTTCACCTGGTATTG 852 >seq131538 Length=717 Score = 93.3 bits (102), Expect = 1e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 178004 AAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAA 178063 ||| ||||||||||||||||| || ||||| ||||| || | | || || ||||| || Sbjct 14 AAAAATTCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGGTTGATTTTTGCCGGTAA 73 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 || || ||||||||| | || | | ||||| || | || |||||||| || || || Sbjct 74 GCAACTTGAAGATGGACGAACATTATCTGATTACAATATTCAGAAAGAATCTACTCTTCA 133 Query 178124 TCTTGTTTTGAGACTCAGA 178142 |||||| | ||||| ||| Sbjct 134 CCTTGTTCTCAGACTGAGA 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1198753119216156