Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq2007 114 1e-20 >seq2007 Length=108395 Score = 114 bits (126), Expect = 1e-20 Identities = 188/269 (70%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 60843 TTTGACTGCGTCTTTAAGTGCTTTTGCTGGCTTAAATGCAGGTGCTTTTGTAGCCGGAAT 60902 ||| || |||||||| | |||||| |||| |||||||||||| |||| |||| || || Sbjct 82055 TTTAACAGCGTCTTTCAATGCTTTACCTGGTTTAAATGCAGGTACTTTGCTAGCTGGGAT 81996 Query 60903 ATCAATTTCCTCTCCTGTCTGGGGATTTCTCCCTTTACGAGCTGCGCGTTCACGAACTTC 60962 || ||||| || || || || || || | ||||||||||| |||||||| || ||||| Sbjct 81995 TTCGATTTCTTCACCAGTTTGTGGGTTACGTCCTTTACGAGCCGCGCGTTCGCGTACTTC 81936 Query 60963 AAATGTTCCGAAACCAGGAATACTT--ACTTTTTCTCCACTTTTTAATGCCTCTGAAATA 61020 ||| | || ||||| || || || |||||||| || | ||| || ||| ||| Sbjct 81935 AAAGTTACCAAAACC--GATTAATTGAACTTTTTCGCCGTTAGCTAAAGCATCTTGGATA 81878 Query 61021 GTGTCAAAGACTTTTTCGACACTGGGAGCTCCTTCTTTTTTAGATACCCCTTGTTTTTCT 61080 || ||| || || || | || | | |||||||||| || || | Sbjct 81877 GTTGAAAATACAGCGTCAACTGCTGCAGTTGCGTCTTTTTTAGTTAAATCTGTAGCTGAA 81818 Query 61081 GCCACTTTAGCGATTAGTTCTGTTTTATT 61109 || ||||| |||||| ||||| |||||| Sbjct 81817 GCAACTTTTTCGATTAATTCTGCTTTATT 81789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429167447300948