Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_002185.1
Length=35466
Score E
Sequences producing significant alignments: (Bits) Value
seq1539 131 4e-26
seq3145 107 4e-19
seq14859 91.5 3e-14
>seq1539
Length=57711
Score = 131 bits (144), Expect = 4e-26
Identities = 230/328 (70%), Gaps = 9/328 (3%)
Strand=Plus/Minus
Query 5369 GAGAAAAAACATGATTAACAATACAGTTTTAGTTGGAAGATTAACTAAAGACCCAGAGTT 5428
|||| |||| ||||| || ||| | |||||| ||| | ||||| ||||| || || ||
Sbjct 16182 GAGATAAAA-ATGATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCCCGA-TT 16125
Query 5429 TAA---ATACA-CAGGTAGCAACATCGCAGTAGCATCTTTCAGCCTTGCGGTTAACCGTA 5484
|| |||| || || ||| || ||||| || |||| | | | || ||||| || |
Sbjct 16124 TACGTTATACCGCAAGTGGCA-CA--GCAGTGGCCACTTTTACCTTAGCCGTTAATCGCA 16068
Query 5485 ACTTTAAGGATGCTAATGGTGAGCGTGAAGCAGACTTTATCAATTGCGTTATCTGGCGCC 5544
| |||| | || || || | || ||||| || ||||||||||| || || |||||
Sbjct 16067 ATTTTACGAATCAAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTA 16008
Query 5545 AGCAAGCTGAAAATTTGGCTAATTGGGCTAAAAAAGGCGCATTAATTGGAATCACTGGAC 5604
| | ||| |||| |||||| | |||||||| || ||||| || || ||||
Sbjct 16007 AACCAGCGGAAACGATGGCTACATTAGCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGAC 15948
Query 5605 GTATTCAGACTCGTAGCTATGAAAACCAACAGGGTCAACGAGTGTATGTGACAGAGGTAG 5664
| ||||| || || | ||||| ||||| || || || || || || ||||| || || |
Sbjct 15947 GGATTCAAACGCGGACTTATGACAACCAGCAAGGACAGCGTGTCTACGTGACTGAAGTTG 15888
Query 5665 TCGCTGAGAATTTCCAAATGCTAGAAAG 5692
| || || ||||||||| | |||||||
Sbjct 15887 TGGCCGATAATTTCCAACTATTAGAAAG 15860
>seq3145
Length=45091
Score = 107 bits (118), Expect = 4e-19
Identities = 224/329 (68%), Gaps = 6/329 (2%)
Strand=Plus/Plus
Query 5364 AAGAGGAGAAAAAACATGATTAACAATACAGTTTTAGTTGGAAGATTAACTAAAGACCCA 5423
||||||| ||||| |||||||||||| |||||| ||| | ||||| ||||||||
Sbjct 1781 AAGAGGA--AAAAATATGATTAACAATGTGACTTTAGTAGGACGTTTAACGAAAGACCCT 1838
Query 5424 GAGTTTAAATACAC-AG-GTAGCAACATCGCAGTAGCATCTTTCAGCCTTGCGGTTAACC 5481
|| || || || || | | || | | || || | || | |||||| ||||| |
Sbjct 1839 GATTTGCGCTATACGAGCGGTGGAAAA--GGTGTGGCTACATTTACCCTTGCAGTTAATC 1896
Query 5482 GTAACTTTAAGGATGCTAATGGTGAGCGTGAAGCAGACTTTATCAATTGCGTTATCTGGC 5541
| ||||||| || || ||||||||||||||||| | | || || || |||
Sbjct 1897 GAAACTTTACCAATCAAGCCGGAGAGCGTGAAGCAGACTTCGTTCAATGTGTGATTTGGA 1956
Query 5542 GCCAGCAAGCTGAAAATTTGGCTAATTGGGCTAAAAAAGGCGCATTAATTGGAATCACTG 5601
| | | ||| |||| ||||||||| ||| | || | || | || | || |
Sbjct 1957 GGAAACCAGCGGAAACACTGGCTAATTATGCTCGCAGGGGAACCTTGCTAGGCGTGACCG 2016
Query 5602 GACGTATTCAGACTCGTAGCTATGAAAACCAACAGGGTCAACGAGTGTATGTGACAGAGG 5661
|||| ||||| || ||| ||||| || || || || ||||| || ||||| || || |
Sbjct 2017 GACGAATTCAAACACGTTCTTATGACAATCAGCAAGGGCAACGTGTTTATGTAACGGAAG 2076
Query 5662 TAGTCGCTGAGAATTTCCAAATGCTAGAA 5690
| || || |||||||| ||| || | |||
Sbjct 2077 TTGTAGCAGAGAATTTTCAATTGTTGGAA 2105
>seq14859
Length=68005
Score = 91.5 bits (100), Expect = 3e-14
Identities = 134/187 (72%), Gaps = 12/187 (6%)
Strand=Plus/Plus
Query 5375 AAACATGATTAACAATACAGTTTTAGTTGGAAGATTAACTAAAGACCCAGAGTTTA--AA 5432
|| ||||||||| || || ||||| ||| | |||||||| |||||||| | | ||
Sbjct 19974 AAGCATGATTAATAACGTTGTATTAGTGGGACGGTTAACTAAGGACCCAGACATAAGAAA 20033
Query 5433 TACACAGGTAGCAAC----ATCGCAGTAGCATCTTTCAGCCTTGCGGTTAACCGTAACTT 5488
||| || || ||| ||||| ||| ||| | || ||||| |||||||||||
Sbjct 20034 TACTCAACAAGGAACGACGATCGC--TAG----TTTTACACTAGCGGTCAACCGTAACTT 20087
Query 5489 TAAGGATGCTAATGGTGAGCGTGAAGCAGACTTTATCAATTGCGTTATCTGGCGCCAGCA 5548
||| || ||||| ||||||||||||| ||||| ||||| ||| ||||| ||
Sbjct 20088 TAAAGACCAAAATGGAAAGCGTGAAGCAGATTTTATTAATTGTGTTGCTTGGCGTAAGAC 20147
Query 5549 AGCTGAA 5555
|||||||
Sbjct 20148 AGCTGAA 20154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113154084673824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |