Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq37664 113 8e-20 seq8075 95.1 2e-14 >seq37664 Length=9217 Score = 113 bits (124), Expect = 8e-20 Identities = 161/218 (74%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 135727 GGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGA-TACAAACAAACCACT 135785 |||||||| || |||||| |||| | || || |||| ||||| | | | || ||||| Sbjct 2743 GGTATATGTGACAATTTATTGACATGTACAGTCCGAGCGTGGGACTTCTCA-AAGCCACT 2801 Query 135786 CATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAAAACATAT 135845 | ||||||||||||||||| ||| ||||||||||||||||||||| ||||| || Sbjct 2802 TGTATTCTGTCCTGCAATGAACACTAGAATGTGGGAACATCCTATTACATCTAAACAAAT 2861 Query 135846 AGATACGTTAAAATATATGGG-TTTCATAGAAATAGAATGCATAGaaaaaaaaC--TAGC 135902 |||| ||||| || ||| ||||| |||||| | || | || ||||| || Sbjct 2862 AGATGTTTTAAAGGATTGGGGCTTTCA-AGAAAT-TCCTCCA-ATAAGTAAAACTTTAAT 2918 Query 135903 ATGTGGAGACGTAGGAAATGGTGCTATGGCAGAAGTTG 135940 |||||||| ||| ||||| |||||||||||||| Sbjct 2919 GTGTGGAGATACAGGTGTTGGTGGTATGGCAGAAGTTG 2956 >seq8075 Length=22473 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 188846 CAAGTAGACGCTCATAATATAGTACCTTGTTGGGAAGCTTCTGATAAAGAAGAATACGGT 188905 || ||||| ||||| ||| | || || ||||||| |||||||||||| | ||||| Sbjct 15486 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCA 15427 Query 188906 GCACGAACTTTAAGAAAAAAGATATTTGATAAATTATATGAATATATGACAGAATTTCCT 188965 ||| |||| ||||||| || || | ||||||| |||||||| | |||||||||||| Sbjct 15426 GCAAGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTCACAGAATTTCCT 15367 Query 188966 GTTGTTCGTAAACATCCATA 188985 || ||||||||| || Sbjct 15366 CCACTTATTAAACATCCTTA 15347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921349437043360