Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_002486.1 Length=45636 Score E Sequences producing significant alignments: (Bits) Value seq14523 114 4e-21 seq14088 80.6 8e-11 >seq14523 Length=17711 Score = 114 bits (126), Expect = 4e-21 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 23949 TAGAAATAGCTTTTCTAAAACTGATCATGATGCAACTTTTATGAGAATGAAGGAAGACCA 24008 |||||| || | ||| ||||| ||||||||||| || |||||| | | || |||||||| Sbjct 9709 TAGAAACAGTTATTCAAAAACCGATCATGATGCGACATTTATGCGCGTAAAAGAAGACCA 9768 Query 24009 TATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACAAATAGCGACAAATTCTCAATT 24068 |||||||||||||||||||| || | || || | || || || ||| | |||||| Sbjct 9769 CATGAAAAATGGCCAACTTAAACCTGCGTATAACCTGCAGATCGCTACATGTAATCAATT 9828 Query 24069 TGTTTTATCCTATGACCTATTTCAAAACCCGACAGATACTA 24109 ||| | ||| || | ||||||||||| ||||| |||| Sbjct 9829 TGTGCTCGGCTACGATGTCTTTCAAAACCCAACAGACACTA 9869 >seq14088 Length=28720 Score = 80.6 bits (88), Expect = 8e-11 Identities = 105/143 (73%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 5379 AACCAAAAGTATTATTCGCTGACTCGGTAGCTGGTAGTGATAATTCAATACTTG-TTGGG 5437 |||| |||| ||||||| | || | ||| ||||| | ||||||| | ||| || Sbjct 2755 AACCTAAAGCATTATTCTCAGATGCAGTAAGAGGTAGCGTTAATTCA-TGTTTGATTAAA 2697 Query 5438 GAACTAGCGAAAATACTTAAACAAAACGGTGTTGATATAGGACAAAACAGGTTGTTCAAA 5497 ||| |||| | || || |||||||||||| | |||| || ||||| | ||||||| Sbjct 2696 GAATTAGCCACGATTCTAAAACAAAACGGTATAAATATTGGGCAAAATCGTTTGTTCATT 2637 Query 5498 TGGTTAAGAAATAATGGATATCT 5520 ||||||||| | ||||| ||||| Sbjct 2636 TGGTTAAGAGAGAATGGTTATCT 2614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145636218611184