Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_002666.1
Length=35538
Score E
Sequences producing significant alignments: (Bits) Value
seq7607 437 2e-118
seq14859 172 1e-38
seq1539 136 9e-28
seq1464 113 1e-20
seq640 86.0 1e-12
>seq7607
Length=81728
Score = 437 bits (484), Expect = 2e-118
Identities = 667/947 (70%), Gaps = 11/947 (1%)
Strand=Plus/Minus
Query 29280 GGCGGTGGTTGGAATGGTCAATACCCACCAGAAGTCATAAGTGACCGTGATAAACGCTAC 29339
|||||| ||||||||||||| |||||||||||| | | || ||||||||||||||
Sbjct 53237 GGCGGTAGTTGGAATGGTCAGTACCCACCAGAAATTACTTCGGATCGTGATAAACGCTAT 53178
Query 29340 TGGCAAATCTGGGCAATGGCAATTGGGGCTGGTTTCTCTAAACAAGCGGCGGCCGCATTA 29399
|||||||| ||||||||||||||||| || || ||| | ||||||| || ||||| |
Sbjct 53177 TGGCAAATTTGGGCAATGGCAATTGGCGCAGGATTCACACAACAAGCCGCTGCCGCTCTT 53118
Query 29400 CTCGGAAATGCACAGGGTGAATCTGATGCCAATCCAACGGCTGATGAGGGCGGCGGACGT 29459
| ||||| || || || ||||||||||| ||||| || || ||||| || ||
Sbjct 53117 TTAGGAAACGCTCAAGGAGAATCTGATGCAAATCCTACTGCCGATGAAGGAAATGGTAAA 53058
Query 29460 CCTGGATTCGGTTATGGGGTTTGGCAATGGACGGATAGTTCAGGCGCTAGCTCTGGACGT 29519
|| |||||||||||||| || ||||| ||||| |||||| |||| || || ||| |||
Sbjct 53057 CCAGGATTCGGTTATGGCGTATGGCAGTGGACAGATAGTACAGGGGCGAGTAGTGGTCGT 52998
Query 29520 GTTTATATGATTAACCTCATGACACGAGCAGGAGTGACTGACAATCCTGACACAATCACA 29579
|| |||||||| || | ||||| | ||| ||| | ||||| |||||||| || ||||||
Sbjct 52997 GTATATATGATCAATTTAATGACTCAAGCCGGAATCACTGAAAATCCTGATACTATCACA 52938
Query 29580 GCCCAATTCAAACTCTTGATGTGGCATGCACAAAACGGCCAATGGATTGCGAAAAGTTCT 29639
|| || || || | || ||||||||||| | ||||| ||||||||||| | | |
Sbjct 52937 GCGCAGTTTCAATTGTTAATGTGGCATGCTCCGAACGGTCAATGGATTGCAACCAACGCC 52878
Query 29640 TATCCTTATTCTTGGACTCAATTCATGACATTGACCAATATCAATACTGCAACGCAAGCT 29699
|| |||||| | ||||| ||||| ||| | || ||||| ||| ||||| |||
Sbjct 52877 TACCCTTATACATGGACACAATTTATGGGCCTCACAGATATCGCTACCGCAACAAGAGCG 52818
Query 29700 TTTGTAGCTAACTTTGAACGTCCTTTAAACGGACACCCTGAACGTAGCACTTGGGCACAA 29759
|| | | ||||||||||| || ||||| | ||||||||| | | ||| ||
Sbjct 52817 TTCGAAAAGAACTTTGAACGACCGTTAAATGATCACCCTGAAAGAGTCGGCTGGTCAACT 52758
Query 29760 GAGTGGTATAACAAATTT----GTTAATCTTAAAATCCCAAGCGGTGGCGGAGGTTATAT 29815
| ||||| ||| ||| || |||| ||||| || | | || |||||
Sbjct 52757 AATTGGTACAACCGGTTTAAAGATTTATCT----ATCCC--GCAAT-CAGCTGGATATAT 52705
Query 29816 TGCTCCAATTTCAAGTCCTATTACCGTAACAAGTGAAATGGGTTGGAGAACGAGTCCAAT 29875
| | |||||| || || || || |||||| | |||||| | || || || ||
Sbjct 52704 TACGCCAATTAGCGCACCAGTTCGAGTGACTAGTGAATTTGGTTGGCGTACAAGCCCTAT 52645
Query 29876 CACCGGAGCGCAAGAATTTCACAATGCTATGGACTTGGTTAATGGCAATCCAACAACTCC 29935
|||||| || |||||||| || |||| || || |||| ||| |||||||| || ||
Sbjct 52644 CACCGGTGCTCAAGAATTCCATAATGGAATTGATCTGGTGAATAACAATCCAAATACGCC 52585
Query 29936 AATCTTAGCTTCTGGCGATGGTCAAGTGGTCCAAGCGGGAAGTAATTATTATGACTGGTA 29995
||||| ||||| | || || | | | || ||| | |||| | |||||
Sbjct 52584 TATCTTTGCTTCAAGTGAGGGAGAGATCATTGTTGCAGGAGCAGAATATTTTAGTTGGTA 52525
Query 29996 TGGAAATTACACGGTCATCAAGCATGCGGATGGACTTTATACAGGGTACGCACATCAAAG 30055
|| ||||| ||||||| ||| | ||||| |||| || || ||||| ||| |||
Sbjct 52524 CGGTAATTATGTAGTCATCAGGCACTCAGATGGTATTTACACGGGTTACGCTCATTTAAG 52465
Query 30056 CAGAATCGATGTTTCTGTGGGTCAAAATGTTAAAAAGGGCCAACAAATTGGACTTATGGG 30115
|| | |||||||||||||| ||||| ||| | | || |||||| | || | |||||
Sbjct 52464 TAGGGTAGATGTTTCTGTGGGACAAAAGGTTTCACAAGGACAACAATTAGGGTTGATGGG 52405
Query 30116 AGCGACTGGTCCGGTCACTGGACCACATTTGCACTTCCAATTTATGGACCAATATTGGCC 30175
| | ||||||||| || ||| |||| | || || ||||||||||| ||| || ||
Sbjct 52404 AACAACTGGTCCGTCTACAGGAGAACATCTTCATTTTCAATTTATGGATGAATTTTATCC 52345
Query 30176 ATCATCAAGTGCTCACTTTAAAAATCCAAGAGATTATATCAAATTTT 30222
||||||| |||| || | ||||| | ||||||| | ||||
Sbjct 52344 CTCATCAAACGCTCGATTCCATAATCCGCGTAATTATATTGATTTTT 52298
>seq14859
Length=68005
Score = 172 bits (190), Expect = 1e-38
Identities = 265/374 (71%), Gaps = 3/374 (1%)
Strand=Plus/Plus
Query 29852 AATG-GGTTGGAGAACGAGTCCAATCACCGGAGCGCAAGAATTTCACAATGCTATGGACT 29910
|||| || ||||| | |||||||| | | |||||||| || |||| || || |
Sbjct 44258 AATGTGGATGGAGGAAAAGTCCAATTAATAATGAACAAGAATTCCATAATGGAATTGATT 44317
Query 29911 TGGTTAATGGCAATCCAACAACTCCAATCTTAGCTTCTGGCGATGGTCAAGTGGTCCAAG 29970
| | ||||| ||||| | || || || || || || |||||| |||| || || |
Sbjct 44318 TTATAAATGGAAATCCTAATACACCTATTTTTGCAGCTTTAGATGGTGAAGTTGTTCAGG 44377
Query 29971 CGGGAAGTAATTATTATGACTGGTATGGAAATTACACGGTCATCAAGCATGCGGATGGAC 30030
|||| ||||||||||||||||||||| |||||| ||| || || ||| |||||
Sbjct 44378 CGGGTGCTAATTATTATGACTGGTATGGTAATTACGTGGTTATTAAACATAATAATGGAA 44437
Query 30031 TTTATACAGGGTACGCACATCAAAGCAGAATCGATGTTTCTGTGGGTCAAAATGTTAAAA 30090
| ||||| || || ||| | | || ||||||||||| || ||||| || | |
Sbjct 44438 AGTGGACAGGTTATGCTCATTTATCTCGTATTGATGTTTCTGTTGGACAAAAAGTCCAGA 44497
Query 30091 AGGGCCAACAAATTGGACTTATGGGAGCGACTGGTCCGGTCACTGGACCACATTTGCACT 30150
| ||| |||||||| | |||||| | |||||||| |||||| |||| | || |
Sbjct 44498 AAGGCGCTCAAATTGGCTTGATGGGAACAACTGGTCCATCTACTGGAGAACATCTACATT 44557
Query 30151 TCCAATTTATGGACCAATATTGGCCATCATCAAG-TGCTCACTTTAAAAATCCAAGAGAT 30209
| ||| ||||| | | |||||||| ||| | || || | | ||| | ||||||||| ||
Sbjct 44558 TTCAAATTATGAAAAATTATTGGCC-TCAGCCAGTTGTTGATTTTGAGAATCCAAGAAAT 44616
Query 30210 TATATCAAATTTTA 30223
|||||| |||||||
Sbjct 44617 TATATCCAATTTTA 44630
>seq1539
Length=57711
Score = 136 bits (150), Expect = 9e-28
Identities = 225/322 (70%), Gaps = 2/322 (1%)
Strand=Plus/Minus
Query 6617 AATAATGATTAATAATGTTGTATTAGTAGGTCGCTTAACTCGTGACCCTGAACTTAGACA 6676
|| |||||| |||||||| |||||||| || ||||| || || || | | |
Sbjct 16177 AAAAATGATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCCCGATTTACGTTA 16118
Query 6677 TACACCACAGAACCA-AGCAGTAGGTACATTTGGATTAGCTGTAAATCGCCAGTTTAAAA 6735
||| || || || |||||| | || ||| ||||| || |||||| | |||| |
Sbjct 16117 TACCGCA-AGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGA 16059
Query 6736 ATGCGAATGGCGAACGTGAGGCTGATTTCATTAACTGCGTTATTTGGCGACAACAAGCCG 6795
|| || ||| | || || |||||||| || || || || |||||||| ||| ||| |
Sbjct 16058 ATCAAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGG 15999
Query 6796 AAAATTTAGCTAAGTTTGCTAAAAAAGGAGCTTTGATTGGAATAACTGGACGGATTCAAA 6855
||| | |||| || |||||||| || ||| || || | |||||||||||||
Sbjct 15998 AAACGATGGCTACATTAGCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAA 15939
Query 6856 CAAGGAACTATGAGAACCAACAAGGACAAAAAGTTTATGTTACCGAAGTTGTTGCAGATA 6915
| ||| ||||| ||||| |||||||| || || || || |||||||| || ||||
Sbjct 15938 CGCGGACTTATGACAACCAGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATA 15879
Query 6916 CTTTCCAAATGCTAGAAAGCAA 6937
||||||| | ||||||| ||
Sbjct 15878 ATTTCCAACTATTAGAAAGTAA 15857
>seq1464
Length=66918
Score = 113 bits (124), Expect = 1e-20
Identities = 215/314 (68%), Gaps = 2/314 (1%)
Strand=Plus/Plus
Query 6622 TGATTAATAATGTTGTATTAGTAGGTCGCTTAACTCGTGACCCTGAACTTAGACATACAC 6681
|||||||||| |||||| |||| || || | || || || || | || |||||
Sbjct 17855 TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACAT 17914
Query 6682 CACAGAACCAA-GCAGTAGGTACATTTGGATTAGCTGTAAATCGCCAGTTTAAAAATGCG 6740
|| || || || |||| || || |||||||| ||||| | || | |
Sbjct 17915 CA-AGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAA 17973
Query 6741 AATGGCGAACGTGAGGCTGATTTCATTAACTGCGTTATTTGGCGACAACAAGCCGAAAAT 6800
|| ||| | |||||||| ||||| ||||| || || ||||||||| || ||| ||||
Sbjct 17974 AACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACA 18033
Query 6801 TTAGCTAAGTTTGCTAAAAAAGGAGCTTTGATTGGAATAACTGGACGGATTCAAACAAGG 6860
|||| || | ||| | |||||| || | | || ||||||| || |||||||| |
Sbjct 18034 CTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGT 18093
Query 6861 AACTATGAGAACCAACAAGGACAAAAAGTTTATGTTACCGAAGTTGTTGCAGATACTTTC 6920
||||| || |||||||||||| || || || || ||||| ||||| || | |||
Sbjct 18094 TCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTC 18153
Query 6921 CAAATGCTAGAAAG 6934
||| | | |||||
Sbjct 18154 CAATTATTGGAAAG 18167
>seq640
Length=68089
Score = 86.0 bits (94), Expect = 1e-12
Identities = 87/112 (78%), Gaps = 1/112 (1%)
Strand=Plus/Minus
Query 10734 AGAATATACTTGTGAAACGTGTGGATTTTGCCACATTGACGGTTGGGAAGCTGGGGCATG 10793
|||| | |||||||| |||||| |||||||||||||| |||||||| ||| ||
Sbjct 26287 AGAAGACCCTTGTGAAGACTGTGGAGCATGCCACATTGACGGCTGGGAAGCCATGGCGTG 26228
Query 10794 TTGGAGTTTAGCCAATGACCCTGATTATGACCCATTTGATATTT-AAAGGAG 10844
|||||| || ||| ||||||||||| ||||| | || |||| |||||||
Sbjct 26227 TTGGAGCTTTCTCAACGACCCTGATTACGACCCGTGGGAAATTTAAAAGGAG 26176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113384046684000
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