Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_002667.1 Length=41834 Score E Sequences producing significant alignments: (Bits) Value seq1539 150 5e-32 seq3145 122 2e-23 seq1464 104 6e-18 seq52331 82.4 2e-11 >seq1539 Length=57711 Score = 150 bits (166), Expect = 5e-32 Identities = 239/338 (71%), Gaps = 5/338 (1%) Strand=Plus/Minus Query 7018 AAAAGGA-AGAACAAAATGATTAACAATGTCACTCTAGTAGGGCGAATTACTAAAGAACC 7076 ||| ||| ||| |||||||| || ||||| ||| ||||||| || | || ||||| || Sbjct 16189 AAATGGAGAGATAAAAATGATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCC 16130 Query 7077 TGAACTTAGATATACACCACAAAATAAAGCAGTTGCCACTTTTACTCTTGCAGTTAATCG 7136 || | | ||||| || | |||||| ||||||||||| | || |||||||| Sbjct 16129 CGATTTACGTTATACCGCAAGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCG 16070 Query 7137 AGCATTTAAAAATGCTAATGGAGAAAGAGAAGCTGACTTTATCAATTGTGTTATTTGGGG 7196 |||| ||| || || | |||||||||| |||||||||||||| |||||| | Sbjct 16069 CAATTTTACGAATCAAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCG 16010 Query 7197 TAAATCAGCCGAAAACTTGGCCA-ATTGGACTCATAAAGGTCAATTAATCGGAGTTACTG 7255 |||| |||| |||| |||| | ||| | || | || ||| |||||||| || | Sbjct 16009 TAAACCAGCGGAAACGATGGCTACATTAG-CTAAAAAGGGTAGTTTAATCGGCGTCGTCG 15951 Query 7256 GTAGTATTCAAACTCGAAACTACGAGAACCAACAAGGTCAACGAGTTTATGTAACAGAAG 7315 | | |||||||| || | || || ||||| ||||| || || || || || || |||| Sbjct 15950 GACGGATTCAAACGCGGACTTATGACAACCAGCAAGGACAGCGTGTCTACGTGACTGAAG 15891 Query 7316 TCATTGCAAACAATTTCCAAGTACTTGAAA--AAAGCA 7351 | | || | ||||||||| || | |||| |||||| Sbjct 15890 TTGTGGCCGATAATTTCCAACTATTAGAAAGTAAAGCA 15853 >seq3145 Length=45091 Score = 122 bits (134), Expect = 2e-23 Identities = 220/318 (69%), Gaps = 3/318 (1%) Strand=Plus/Plus Query 7020 AAGGAAGAACAAA-ATGATTAACAATGTCACTCTAGTAGGGCGAATTACTAAAGAACCTG 7078 || || ||| ||| |||||||||||||| ||| ||||||| || | || ||||| |||| Sbjct 1780 AAAGAGGAAAAAATATGATTAACAATGTGACTTTAGTAGGACGTTTAACGAAAGACCCTG 1839 Query 7079 AACTTAGATATAC-ACCACAAAATAAAGCAGTTGCCACTTTTACTCTTGCAGTTAATCGA 7137 | | | ||||| | | | |||| || || || ||||| ||||||||||||||| Sbjct 1840 ATTTGCGCTATACGAGCGGTGGA-AAAGGTGTGGCTACATTTACCCTTGCAGTTAATCGA 1898 Query 7138 GCATTTAAAAATGCTAATGGAGAAAGAGAAGCTGACTTTATCAATTGTGTTATTTGGGGT 7197 |||| ||| ||||| | ||||| ||||| | | ||||| |||||| | Sbjct 1899 AACTTTACCAATCAAGCCGGAGAGCGTGAAGCAGACTTCGTTCAATGTGTGATTTGGAGG 1958 Query 7198 AAATCAGCCGAAAACTTGGCCAATTGGACTCATAAAGGTCAATTAATCGGAGTTACTGGT 7257 ||| |||| |||| |||| |||| ||| | || || | || || || || Sbjct 1959 AAACCAGCGGAAACACTGGCTAATTATGCTCGCAGGGGAACCTTGCTAGGCGTGACCGGA 2018 Query 7258 AGTATTCAAACTCGAAACTACGAGAACCAACAAGGTCAACGAGTTTATGTAACAGAAGTC 7317 | |||||||| || || || || || ||||| ||||| ||||||||||| ||||| Sbjct 2019 CGAATTCAAACACGTTCTTATGACAATCAGCAAGGGCAACGTGTTTATGTAACGGAAGTT 2078 Query 7318 ATTGCAAACAATTTCCAA 7335 | ||| | ||||| ||| Sbjct 2079 GTAGCAGAGAATTTTCAA 2096 >seq1464 Length=66918 Score = 104 bits (114), Expect = 6e-18 Identities = 134/184 (73%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 7165 GAAGCTGACTTTATCAATTGTGTTATTTGGGGTAAATCAGCCGAAAACTTGGCCAATTGG 7224 || || || ||||| |||||||| |||||| | |||||||| |||| | || || | Sbjct 17986 GAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACACTAGCAAACTAT 18045 Query 7225 ACTCATAAAGG---TCAATTAATCGGAGTTACTGGTAGTATTCAAACTCGAAACTACGAG 7281 | |||||||| || ||| || || |||||| |||||||||| || || || Sbjct 18046 GCACATAAAGGAACTCTTTTA---GGTGTAACTGGTCGTATTCAAACGCGTTCTTATGAT 18102 Query 7282 AACCAACAAGGTCAACGAGTTTATGTAACAGAAGTCATTGCAAACAATTTCCAAGTACTT 7341 || |||||||| ||||| || || ||||||||||| |||| | || |||||| || | Sbjct 18103 AATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTATTG 18162 Query 7342 GAAA 7345 |||| Sbjct 18163 GAAA 18166 >seq52331 Length=217 Score = 82.4 bits (90), Expect = 2e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 7033 ATGATTAACAATGTCACTCTAGTAGGGCGAATTACTAAAGAACCTGAACTTAGATATACA 7092 |||||||||||||| ||| | ||||| || | || ||||| ||||| | | ||||| Sbjct 191 ATGATTAACAATGTAACTTTGGTAGGACGTTTAACAAAAGACCCTGATTTGCGCTATACG 132 Query 7093 CCACAAAATAAAGCAGTTGCCACTTTTACTCTTGCAGTTAATCGAGCATTTAAAAATGCT 7152 || || || || || |||||| | ||||| |||||| ||||| || Sbjct 131 TCAAGTGGCAAGGCGGTAGCAGGTTTTACATTAGCAGTCAATCGAAGATTTACGAACCAG 72 Query 7153 AATGGAGAAAGAGAAGCTGACTTTATCAATTGTGTTATTTGGGGTAAATCAGCCGAAAAC 7212 ||| | | || || |||| |||| | ||||| |||||||| |||||||| |||| | Sbjct 71 GCAGGACAGCGTGAGGCGGACTATATCCAATGTGTCATTTGGGGGAAATCAGCGGAAACC 12 Query 7213 TTGGCCAATT 7222 || || |||| Sbjct 11 TTAGCAAATT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133492946907168