Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_002671.1
Length=15179
Score E
Sequences producing significant alignments: (Bits) Value
seq5392 168 6e-38
seq2737 165 8e-37
seq14493 150 2e-32
seq19862 120 3e-23
seq1616 105 6e-19
seq14859 91.5 1e-14
>seq5392
Length=101478
Score = 168 bits (186), Expect = 6e-38
Identities = 155/196 (79%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 14526 AATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAA 14585
|| || ||||||||||||||||||||||| ||||| ||||| ||||||||| |||||
Sbjct 58875 AACGGTACAGTAAAATGGTTTAACGCAGACAAAGGTTTTGGATTTATCACTGGTGAAGAT 58934
Query 14586 GGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGAT 14645
|| || || | |||||||| || ||||| |||||| ||| || |||||| || | ||
Sbjct 58935 GGAAATGACGTATTCGCTCATTTTTCAGCTATCCAAGGTGACGGTTTCAAAACATTAGAC 58994
Query 14646 GAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTCAAGCAGTCAAT 14705
||||||||| || |||||||||||||| || |||||||| | ||||||| ||||
Sbjct 58995 GAAGGTCAAGCTGTGACTTTTGATGTTGAAGATGGACAACGTGGCCCTCAAGCAATCAAC 59054
Query 14706 ATCACAAAAGCATAAT 14721
||| ||||||||||
Sbjct 59055 ATCGTTAAAGCATAAT 59070
>seq2737
Length=95958
Score = 165 bits (182), Expect = 8e-37
Identities = 147/184 (80%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 14516 TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCAC 14575
|||||||| || || ||||| |||||||||||| |||| ||||| || || || || ||
Sbjct 42224 TATTATGGAAACAGGTACAGTGAAATGGTTTAACTCAGAAAAAGGTTTCGGTTTCATTAC 42283
Query 14576 TTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAA 14635
||||| | ||||| ||| | |||| ||| |||||||| |||||| ||||||||||||
Sbjct 42284 AGCAGAAAACGGCAACGATGTATTCGTTCATTTCTCAGCTATCCAAGGTGATGGATTCAA 42343
Query 14636 ATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTCA 14695
| | | || ||||| |||| ||| | || ||||||||||||||||||||||| | |||
Sbjct 42344 AACTTTAGAAGAAGGCCAAACAGTAAACTTCGATGTTGAAGAAGGTCAACGTGGCCCTCA 42403
Query 14696 AGCA 14699
||||
Sbjct 42404 AGCA 42407
>seq14493
Length=87834
Score = 150 bits (166), Expect = 2e-32
Identities = 153/198 (77%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 14513 AAATAT-TATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTA 14571
|||||| |||| || || |||||||||||||||||| |||| ||||| ||||| ||||
Sbjct 86185 AAATATATATGAATAACGGTACAGTAAAATGGTTTAACTCAGACAAAGGTTTTGGATTTA 86244
Query 14572 TCACTTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGAT 14631
||||| ||||| || ||||| | || || || || ||||| |||||| ||| || |
Sbjct 86245 TCACTGGTGAAGATGGACAAGATGTATTTGCACATTTTTCAGCCATCCAAGGTGAAGGCT 86304
Query 14632 TCAAATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTC 14691
| || | | |||||||||||| |||| |||||| | ||||| ||||||||||| |
Sbjct 86305 TTAAGACTTTAGATGAAGGTCAAGCAGTTACTTTTGATATCGAAGATGGTCAACGTGGAC 86364
Query 14692 TTCAAGCAGTCAATATCA 14709
|||||||| |||||||
Sbjct 86365 CACAAGCAGTAAATATCA 86382
>seq19862
Length=33806
Score = 120 bits (132), Expect = 3e-23
Identities = 125/163 (77%), Gaps = 1/163 (1%)
Strand=Plus/Plus
Query 14516 TATTA-TGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCA 14574
||||| ||| ||| |||||||| |||||||| ||||| || ||||||||||| ||||||
Sbjct 20521 TATTAATGGAAAACGGAACAGTTAAATGGTTCAACGCTGAAAAAGGATTTGGTTTTATCT 20580
Query 14575 CTTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCA 14634
| ||||| || | || | |||| || || |||||||||||| ||| |||||||
Sbjct 20581 CACGTGAAGATGGAAGCGACGTATTCGTACATTTTTCAGCAATCCAAGGTGACGGATTCA 20640
Query 14635 AATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGA 14677
|| || | || ||||||||| |||| ||||| || |||||
Sbjct 20641 AAACATTAGAAGAAGGTCAAGCAGTTACTTTTGACGTAGAAGA 20683
>seq1616
Length=186323
Score = 105 bits (116), Expect = 6e-19
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 14518 TTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTT 14577
|||||| | | |||||||| |||||||| ||| || ||||||||||| ||||| ||
Sbjct 51041 TTATGGAACACGGAACAGTGAAATGGTTCAACAATGAAAAAGGATTTGGGTTTATTACAG 50982
Query 14578 CAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAAT 14637
||| | || | ||| | |||| || ||||||||||||||| ||||| ||||||
Sbjct 50981 TAGACGGTGGAGACGATGTATTCGTACATTTCTCAGCAATCCAAGGCGATGGCTTCAAAA 50922
Query 14638 CACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTCAAG 14697
| || ||||| ||| |||| ||||| | | | |||||| ||||||| |||||
Sbjct 50921 GCTTAGAAGAAGGCCAAGAAGTAGAATTCTCTATCGTTGAAGGTGCGCGTGGTCCTCAAG 50862
Query 14698 C 14698
|
Sbjct 50861 C 50861
>seq14859
Length=68005
Score = 91.5 bits (100), Expect = 1e-14
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 3074 TCCAAGTAAATAATCCACACTTACATTAAAATATTTTGCAACTGCTTGTATTTTATCGTA 3133
||| ||||| ||||| ||| ||||| |||||| || |||||| ||| | ||| ||
Sbjct 12986 TCCCAGTAAGTAATCAACAGATACATCAAAATAGTTCGCAACTAATTGCACTTTGTCAAC 13045
Query 3134 GTTTGGTTTGTTTTTATTCCAACGTCTTATAGTTCCGTTACCATAACCTAAATG-TTCTT 3192
|| || ||||| |||| || | ||| || ||||| | || || || |||||
Sbjct 13046 ACCAGGATTATTTTTTCTCCAGCGGTTGATAACCCCATTACCGAATCC-AAGTGCTTCTT 13104
Query 3193 CTATTTTTCGAATAGAGGTATGTTTTTGGGCTGCGAGTTCTTTTATTTTTTCGTATAAAT 3252
||| || || ||||| | | |||| ||| || ||||||||||||||||||||
Sbjct 13105 CTAATTGTCTTATAGATATTTTCTTTTCATTTGCAAGCATTTTTATTTTTTCGTATAAAT 13164
Query 3253 CCATTAATATCAACCTTTC 3271
||| | ||||||||||||
Sbjct 13165 CCACTTGTATCAACCTTTC 13183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 48364712298664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |