Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq42908 93.3 3e-14 seq2007 86.0 5e-12 >seq42908 Length=20619 Score = 93.3 bits (102), Expect = 3e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || ||| | || ||||| ||||| ||||||||||||||| ||||||| |||||||||| Sbjct 14800 GGTGATCTTGGACCTGTTTATGGCTTTCAATGGAGACATAGTGGAGCTCAATATGTTGAT 14741 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAA 20321 ||| || ||||| ||||||||| | |||||| ||||||| Sbjct 14740 GCGAAAACTGATTATGCAGGACAAGGAATTGATCAAATACAAAA 14697 >seq2007 Length=108395 Score = 86.0 bits (94), Expect = 5e-12 Identities = 169/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 20374 GCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAA 20433 || ||||| | |||||||||| |||||||| ||||| || || | | | | ||| Sbjct 94592 GCATGGAATCCAGAAGATGTGCCAAGTATGGCTTTACCTCCTTGCCACACGATGTTTCAA 94651 Query 20434 TTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGA 20493 || || || | | ||| || | || || |||||||| || ||||| || Sbjct 94652 TTCTATGTAAATGACAATAAACTAAGTTGCCAGCTGTATCAAAGAAGTGCTGACGTGTTT 94711 Query 20494 CTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 | ||||| || ||||||||||| || ||||| | | || || |||||||||||| Sbjct 94712 TTAGGTGTCCCGTTCAATATTGCTAGCTATGCTTTATTGACACATCTGATTGCACATGAA 94771 Query 20554 ACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAAT 20613 || | ||| || ||||| || |||| || |||| || |||||| ||||| ||| Sbjct 94772 ACGGGATTAGAAGTTGGTGAATTTATCCATACTTTAGGCGATGCGCATCTTTACTCAAAT 94831 Query 20614 CATATAGAAC 20623 || || ||| Sbjct 94832 CACGTAAAAC 94841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398405182535380