Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_002747.1 Length=37667 Score E Sequences producing significant alignments: (Bits) Value seq7607 897 0.0 seq14859 163 7e-36 seq1539 136 9e-28 seq1464 122 2e-23 seq3145 111 4e-20 >seq7607 Length=81728 Score = 897 bits (994), Expect = 0.0 Identities = 1040/1399 (74%), Gaps = 2/1399 (0%) Strand=Plus/Minus Query 13912 CAATCCTTTTG-TAGACTTATCGACAGAAGAACTTAGAAAGTTGGCGAGTCGTGATGGAT 13970 |||||| |||| || ||| ||| ||||||| | | |||||||||||||||||||||| Sbjct 69746 CAATCCATTTGCTAATCTTTCCGA-AGAAGAATTGCGGAAGTTGGCGAGTCGTGATGGAT 69688 Query 13971 AAAATAGCGCTAGGGGCAAAAATTGAGCTGTCTAAGCGCTTTTTCTTTGATTACTGTAAT 14030 ||||| || |||| || ||| ||||| | | || || | ||| |||||||| || | Sbjct 69687 AAAATTGCTTTAGGCGCCAAACTTGAGTTAGCAAAACGATATTTTTTTGATTATTGCCAC 69628 Query 14031 CTCATCATGCCAAGCTTTTATAAACGTGATAGGGCTTATTTAGTGACTATGTGTGAAGAG 14090 | || |||||| |||||||| | || || | ||| | || |||| |||| |||| Sbjct 69627 TTGATTATGCCATCGTTTTATAAGCCAGACAGAGATTACCTTGTTTCTATATGTGGAGAG 69568 Query 14091 TTTCAGTCATTTCTAAATGATAATGAGCATGATGTTTTAGTTTTGAATCTTCCGCCACGT 14150 ||||||||||| || ||||| ||||| || ||||| | || | ||| | ||||| | Sbjct 69567 TTTCAGTCATTCCTTAATGACAATGAACACGATGTGCTTGTGCTTAATATGCCGCCTAGA 69508 Query 14151 CATGGGAAATCTCTCACGCTTGGTAAATTTGTAGAGTGGGTGCTTGGTAATGACCACACG 14210 ||||| || || | || ||||| ||||| || ||| | | || ||||| || | Sbjct 69507 CATGGTAAGTCCTTAACACTTGGACGGTTTGTCGAATGGATATTAGGGAATGATCATAGC 69448 Query 14211 AAGAAAATCATGACTGGTTCATATAACGAAACTTTATCTACTGTCTTTTCTAAAAATGTT 14270 |||||||| |||||||| ||||||||||| || |||| || || ||||| || ||||| Sbjct 69447 AAGAAAATTATGACTGGATCATATAACGAGACACTATCGACCGTATTTTCCAAGAATGTG 69388 Query 14271 CGTAATACGCTTCAAGAAGAAAAAGCAGATGAGAACAAAATCGTTTACTCTGATATTTTC 14330 | || || | ||||||| |||||| ||| | | | || || ||||| |||||||| Sbjct 69387 AGAAACACAATCCAAGAAGTAAAAGCCGATAAAGATATGATAGTCTACTCCGATATTTTT 69328 Query 14331 GATGCTGCAATTAAGTATGGAGATGCTGCGAAAAACCTTTGGAGTTTGTCGGACGGCTAT 14390 ||||| || || ||||| |||| || | || |||||||||||| || |||||| Sbjct 69327 GATGCGAAGATAAAATATGGTGATGGAGCTATGAATCTTTGGAGTTTGGAAGATGGCTAT 69268 Query 14391 AATAACTATCTGGCAACCTCTCCAACAGGGACTGCAACAGGTTTTGGTGCTGACATTATT 14450 |||||||| ||||| || || ||||| || || || || ||||||||||| ||||| ||| Sbjct 69267 AATAACTACCTGGCCACATCGCCAACTGGTACAGCTACTGGTTTTGGTGCAGACATAATT 69208 Query 14451 ATCATTGATGATGTTATCAAGAATGCTGAGGAAGCTAACAACGCGACAGTATTAGAAAAA 14510 ||||||||||| || |||||||| || || ||||| |||||||| |||| || || ||| Sbjct 69207 ATCATTGATGACGTAATCAAGAACGCAGATGAAGCAAACAACGCTGCAGTTTTGGATAAA 69148 Query 14511 CATTGGGACTGGTTTGTTAATACCATGCTTTCACGTTTGGAGTCAGGCGGTAAAATCATA 14570 |||||||| |||||||| ||||| ||||| || ||| | ||| |||||| ||||| Sbjct 69147 CATTGGGAATGGTTTGTAAATACTATGCTATCCCGTCTTGAGAGCAACGGTAAGATCATT 69088 Query 14571 ATCAATATGACTCGTTGGCATAGTGAAGATTTAGCCGGACGAGCTTTGCGTGAACTGCCT 14630 ||||| |||||| | |||||||| | ||||| || || |||| || ||| |||| Sbjct 69087 ATCAACATGACTAGATGGCATAGCAATGATTTGGCAGGTAGAGCGTTAAAGGAATTGCCA 69028 Query 14631 AAGAATGGCTATCGAGTAAAGCATATTAATTTTAAAGCTTTCAATGAACAGACAAATGAA 14690 | || ||| || ||||||||||| ||| |||| | ||||| | | || Sbjct 69027 CTTAGCGGGTATAAGGTTAAGCATATTAACTTTCAAGCGTATGATGAAAAAAACGATCGG 68968 Query 14691 ATGCTTTGTGATGACGTTCTGACTCTTGAAGATTATAAGCGCAAAGTAAAAACAATGGGT 14750 |||||||| || || ||||| || ||| ||||| ||| |||| ||||| |||||| Sbjct 68967 ATGCTTTGCGAAGATGTTCTTTCTTATGAGGATTACCTGCGTAAAGCTAAAACGATGGGT 68908 Query 14751 GCTGATATTGCCAGCGCCAACTACCAACAAGAGCCGATTGATGTCAAAGGTCGATTATAT 14810 || || || || ||||||||||||||||||||||| || || | ||||| |||| || Sbjct 68907 GCGGACATCGCTAGCGCCAACTACCAACAAGAGCCTATCGACATTAAAGGGAGATTGTAC 68848 Query 14811 AGTGAGTTCCAAACCTACAATGCTCGTTCAGAGTACAAAAAGATTTGGAACTATTGCGAT 14870 |||||||| | || || | | | || | || || ||||||||| | ||||||||| Sbjct 68847 GGTGAGTTCAAGACTTATAGCAATAGATCCGCCTATAAGAAGATTTGGCATTATTGCGAT 68788 Query 14871 ACTGCAGACACTGGGAAAGACTATCTCTGTTCGATTGTGTGGGGTGAAACCACAGACGGC 14930 ||||| || ||||| || ||||| || |||||||| || ||||| ||||| ||| ||| Sbjct 68787 ACTGCCGATACTGGTAAGGACTACCTTTGTTCGATCGTTTGGGGAGAAACGCTAGATGGC 68728 Query 14931 TTTGCAGATGTGCTAGACATTATTTACACTCAAAAGCCGATGGAATACACAGAAAATGCA 14990 | | || || ||||| | || || |||||| |||| |||||||||||||| | |||| Sbjct 68727 TATCAGGACGTTTTAGACGTCATCTATACTCAACAGCCAATGGAATACACAGAGAGTGCA 68668 Query 14991 GTGGCCAATCAATTAATTAATAACAGAGTGAATGCATCAAGAATCGAGCGCAACAATGGC 15050 || || ||||| || ||||| || ||||||| |||| | |||||||||||||| ||| Sbjct 68667 GTTGCAAATCAGTTGATTAACTTCAAAGTGAATACATCGCGTATCGAGCGCAACAACGGC 68608 Query 15051 GGTCGGTCTTTTGCTCGTTCTGTCAGGGATAAGATTCAAGGTAAAGTTGCTTGTGCTGTA 15110 ||||||||||||||||||||||| || || || | |||| ||| ||| || | | Sbjct 68607 GGTCGGTCTTTTGCTCGTTCTGTAAGAGAGAAAGTAAAAGGAAAATGTGCAACTGTTATT 68548 Query 15111 GAAGATTTCTTCCAAGGAAATAATAAAGAAGCCCGAATTTATTCCAATAGTTATTGGATA 15170 || ||||| ||| | | ||||||||||| |||| |||||||||||| | ||||| Sbjct 68547 TCCGACTTCTTTCAAAGCACCAATAAAGAAGCGAGAATCTATTCCAATAGTCACTGGATT 68488 Query 15171 GAACAGCACGTTCGATTTCCTAATGACTGGCGGACTCGTTTCCCAGAATACTATCAAGCA 15230 ||||| | || ||| | |||| ||||||| | || | || || || |||||| | || Sbjct 68487 GAACAATATGTACGAATGCCTAGTGACTGGAGAACAAGATTTCCTGATTACTATAAGGCG 68428 Query 15231 ATGACAACTTATCAGCGTGAAGGTAAAAATAAACACGATGATGCGCCCGATGCAACAACG 15290 ||||| ||||||||| ||||| || || ||||| |||||||| || ||||||||||| Sbjct 68427 ATGACTACTTATCAGAAAGAAGGAAAGAACAAACATGATGATGCTCCAGATGCAACAACA 68368 Query 15291 GGAATTGCTGAGACAATGA 15309 || || || || ||||||| Sbjct 68367 GGCATCGCCGAAACAATGA 68349 Score = 425 bits (470), Expect = 1e-114 Identities = 662/941 (70%), Gaps = 13/941 (1%) Strand=Plus/Minus Query 28541 GTTGGAATGGTCAATACCCACCAGAAGTCATAAGTGACCGTGACAAACGGTACTGGCAAA 28600 ||||||||||||| |||||||||||| | | || ||||| ||||| || ||||||| Sbjct 53230 GTTGGAATGGTCAGTACCCACCAGAAATTACTTCGGATCGTGATAAACGCTATTGGCAAA 53171 Query 28601 TCTGGGCAATGGCAATTGGGGCTGGTTTCTCTAAACAAGCGGCGGCCGCATTACTCGGAA 28660 | ||||||||||||||||| || || ||| | ||||||| || ||||| | | |||| Sbjct 53170 TTTGGGCAATGGCAATTGGCGCAGGATTCACACAACAAGCCGCTGCCGCTCTTTTAGGAA 53111 Query 28661 ATGCACAAGGTGAATCTGATGCAAATCCAACGGCTGATGAGGGCGGCGGACGTCCTGGTT 28720 | || ||||| ||||||||||||||||| || || ||||| || || || || | Sbjct 53110 ACGCTCAAGGAGAATCTGATGCAAATCCTACTGCCGATGAAGGAAATGGTAAACCAGGAT 53051 Query 28721 TCGGTTATGGGGTTTGGCAATGGACGGATAGTTCAGGCGCTAGCTCTGGACGTGTTTATA 28780 |||||||||| || ||||| ||||| |||||| |||| || || ||| ||||| |||| Sbjct 53050 TCGGTTATGGCGTATGGCAGTGGACAGATAGTACAGGGGCGAGTAGTGGTCGTGTATATA 52991 Query 28781 TGATTAATCTCATGACACGAGCAGGAGTGACTGACAATCCTGACACAATCACAGCCCAAT 28840 |||| ||| | ||||| | ||| ||| | ||||| |||||||| || |||||||| || | Sbjct 52990 TGATCAATTTAATGACTCAAGCCGGAATCACTGAAAATCCTGATACTATCACAGCGCAGT 52931 Query 28841 TTAAGCTCTTGATGTGGCATGCACAAAACGGCCAATGGATTGCGAAAAGTTCTTATCCTT 28900 || | | || ||||||||||| | ||||| ||||||||||| | | | || |||| Sbjct 52930 TTCAATTGTTAATGTGGCATGCTCCGAACGGTCAATGGATTGCAACCAACGCCTACCCTT 52871 Query 28901 ATTCTTGGACTCAATTCATGACATTGACCAATATCAATACTGCAACGCAAGCTTTTGTAG 28960 || | ||||| ||||| ||| | || ||||| ||| ||||| ||| || | | Sbjct 52870 ATACATGGACACAATTTATGGGCCTCACAGATATCGCTACCGCAACAAGAGCGTTCGAAA 52811 Query 28961 CTAACTTTGAACGTCCCTTAAACGGACACCCTGAACGTAGTACTTGGGCCCAAGAA-TGG 29019 ||||||||||| || ||||| | ||||||||| | ||| || | | || ||| Sbjct 52810 AGAACTTTGAACGACCGTTAAATGATCACCCTGAAAG-AGTCGGCTGGTCAACTAATTGG 52752 Query 29020 TATAACAAATTT----GTTAATCTTGAAATCCCAAGCGGTGGCGGAGGTTATATTGCTCC 29075 || ||| ||| || |||| ||||| || | | || |||||| | || Sbjct 52751 TACAACCGGTTTAAAGATTTATCT----ATCCC--GCAAT-CAGCTGGATATATTACGCC 52699 Query 29076 AATTTCAAGTCCTATTACCGTAACAAGTGAAATGGGTTGGAGAACGAGTCCAATCACCGG 29135 |||| || || || || |||||| | |||||| | || || || |||||||| Sbjct 52698 AATTAGCGCACCAGTTCGAGTGACTAGTGAATTTGGTTGGCGTACAAGCCCTATCACCGG 52639 Query 29136 AGCGCAAGAATTTCACAATGCTATGGACTTGGTTAATGGAAATCCAACAACTCCAATCTT 29195 || |||||||| || |||| || || |||| ||| ||||||| || || ||||| Sbjct 52638 TGCTCAAGAATTCCATAATGGAATTGATCTGGTGAATAACAATCCAAATACGCCTATCTT 52579 Query 29196 AGCTTCTGGCGATGGTCAAGTGGTCCAAGCGGGAAGTAATTATTATGACTGGTATGGAAA 29255 ||||| | || || | | | || ||| | |||| | ||||| || || Sbjct 52578 TGCTTCAAGTGAGGGAGAGATCATTGTTGCAGGAGCAGAATATTTTAGTTGGTACGGTAA 52519 Query 29256 TTACACGGTCATCAAGCATGCGGATGGGCTTTATACAGGGTACGCACATCAAAGCAGAAT 29315 ||| ||||||| ||| | ||||| |||| || || ||||| ||| ||| || | Sbjct 52518 TTATGTAGTCATCAGGCACTCAGATGGTATTTACACGGGTTACGCTCATTTAAGTAGGGT 52459 Query 29316 CGATGTTTCTGTGGGTCAAAATGTTAAAAAGGGCCAACAAATTGGACTTATGGGAGCGAC 29375 |||||||||||||| ||||| ||| | | || |||||| | || | |||||| | || Sbjct 52458 AGATGTTTCTGTGGGACAAAAGGTTTCACAAGGACAACAATTAGGGTTGATGGGAACAAC 52399 Query 29376 TGGTCCGGTCACTGGACCACATTTGCACTTCCAATTCATGGACCAATATTGGCCATCATC 29435 ||||||| || ||| |||| | || || ||||| ||||| ||| || || ||||| Sbjct 52398 TGGTCCGTCTACAGGAGAACATCTTCATTTTCAATTTATGGATGAATTTTATCCCTCATC 52339 Query 29436 AAGCGCTCACTTTAAGAATCCAAGGGATTATATCAAATTTT 29476 || ||||| || | ||||| | ||||||| | |||| Sbjct 52338 AAACGCTCGATTCCATAATCCGCGTAATTATATTGATTTTT 52298 Score = 206 bits (228), Expect = 6e-49 Identities = 515/774 (67%), Gaps = 20/774 (3%) Strand=Plus/Minus Query 27373 GGTGAAGAAGTTGGTGACGGTTATGGGCGAAGAATTGAATTTTCAGATGTCGAGTGGAGA 27432 ||||||||||| || || |||||||| |||||||| |||||| | || | || |||| | Sbjct 54458 GGTGAAGAAGTCGGCGATGGTTATGGTCGAAGAATCGAATTTGCGGACATAGAATGGAAA 54399 Query 27433 AAGTCAAATGGTAAACCACTTGATAAGCCTAAAGGTCAAAATTGGATTGAATATCCAGAA 27492 || |||||||| ||| | || || || ||| |||||||| ||||| |||| ||| Sbjct 54398 AAATCAAATGGCGCACCTTTAGACAAACCGTTAGGAGAAAATTGGCTTGAAGATCCGGAA 54339 Query 27493 ATGACGAAAGAATATGGCATTCC---ATCAAACGGAAAAATGTTACCACGTAAAACGGTT 27549 || | ||| ||| ||||| | | || |||| |||| ||| |||| ||| Sbjct 54338 GCAACAGCAAAATTTGGTATTCCGCAACCTAATGGAACAATGAGGAAACGAGAAACAGTT 54279 Query 27550 GTTGTCTTTGATGATGTGGAAGATGCAAGCGAACTTTTACAAAAGACCTATGAACAACTG 27609 || | || |||||| | |||||| ||| || || |||||||| || ||||| | || Sbjct 54278 GTGATTTTCGATGATATTGAAGATCCAACAGAGCTATTACAAAAAACTTATGAGACATTG 54219 Query 27610 GCTTACTACTGTC-GGCCACTTGTTCAGTTTAGTACTGAGATATTAGGCAGTGATTCAAT 27668 | | | || | | || | | ||||||| ||||| | ||| |||||| || Sbjct 54218 G-TGGGTGCTTCCAGACCTTTAGCACAGTTTAAAGCTGAGGTGACAGGGAGTGATGTCAT 54160 Query 27669 TGGAAATACTGTTTCAATCCACAGAGGGGACCGAAATTATCACTACCAAACCAGAGTCTT 27728 ||||||||| || |||| || ||| || || ||||||||||| | || ||| |||| Sbjct 54159 TGGAAATACAGTGACAATTCATAGACATGATCGTAATTATCACTATCGTACTAGAATCTT 54100 Query 27729 TAAAGTGGTTACTGATCATGTTAATGGGC-GAGTTCAAGCTAGTCTAGGTGATAATTTAA 27787 |||||| | | | | | | | ||| | || |||| | ||| | ||||| ||||||| Sbjct 54099 CAAAGTGAGAATTAACCGTTTAACTGGCCAGACCTCAATCGAGT-TGGGTGACAATTTAA 54041 Query 27788 GTGGAAACTCAATTAATCGCCAACTGTCACAAGTTCAAAGCAATATCTCTGACCTTGATA 27847 | | || | | ||| | ||| || | | ||| ||| | || || Sbjct 54040 CCAAAGATGCACGAA---GACAATCAGCGCAAATTTCGAATAGTATTTCTAATCTGGAAT 53984 Query 27848 ATAATAAAATGACTTGGTATGACTCCACAGAAATTGGGAAGTATCAATCTGATATCATTC 27907 ||||| ||||||| || || || || ||||| || || | ||| ||| ||||| | Sbjct 53983 CAAATAAGATGACTTTCTACGAATCAACCGAAATCGGTAAATTCCAAGATGACATCATGC 53924 Query 27908 GAGGTGC------TAAGGGTGGGTCGATTATGATGATGAACCCCTCTGATTTAGGTAAAG 27961 | || || || ||||| ||||| | ||||||| || |||| Sbjct 53923 GTGGCGCAGGGAAAAATGGTGGTTCGATCCTTTTGATGAATGGTCAAGAAACTGGTATTT 53864 Query 27962 GAGAAAGTAGAGAACCGTTTCAAATGGTTTGGATGAATGGTCCTAGCATTGAAGAATCTG 28021 || | ||||| || | ||| ||||||| ||||||||| || ||||| ||||| Sbjct 53863 CTGACGGCAGAGAGCCCTATCAGATGGTTTTTATGAATGGTAAAAGTATTGATACATCTG 53804 Query 28022 ATCATTTTCTTGTAGCTAACTCAGAAGGAATCGGTTTTATTGATGGAAACT--TTAACCT 28079 | |||||| | || |||||||| ||||| |||||||| || || | | | ||| Sbjct 53803 ACCATTTTTTAGTTATGAACTCAGATGGAATTGGTTTTATCGAAGGTGATTTCTGGACC- 53745 Query 28080 TGATAATTTTAAAACGGCATGGACAATTGATGGCATTTTTAATGCAGATTTTAT 28133 ||| | || ||||| |||||||| |||| || | |||||||| ||||||| Sbjct 53744 -GATGAATTCAAAACTGCATGGACGATTGCGGGTGTGTTTAATGCCAATTTTAT 53692 Score = 167 bits (184), Expect = 6e-37 Identities = 259/369 (70%), Gaps = 6/369 (2%) Strand=Plus/Minus Query 16740 AAACGTGAGAAAGCTTGGCAAGAGCAACAAATCAAAGATGACACCAAACGCATGAAACAA 16799 ||||||||||||||||||||| ||||||| || |||||||| | ||||||||||| | Sbjct 66000 AAACGTGAGAAAGCTTGGCAACAGCAACAGATTAAAGATGATAAGAAACGCATGAACGAG 65941 Query 16800 ATCATGGATAAGCTATTTGAA---GCTCAAGAGGCTATTCAAAAAGAAATCAATGCCAAC 16856 |||| || ||| | || || ||||| || || || ||||| || | || | Sbjct 65940 ATCA---ATCAGCGTCTGCAATATGCACAAGATGCGATACAGAAAGAGATAGACGCACAG 65884 Query 16857 TGGCAGAACTTTGCGAATGGTCAAGGAATTTCTATCAGTGAAGCCATGAAACGTGCGGAT 16916 ||| | | ||| | ||||| || ||| || || ||||| ||||| || || | Sbjct 65883 TGGGACAGTTTTTCCAATGGACAGAAAATCACTCGTAGCGAAGCGATGAAGCGAGCTAAC 65824 Query 16917 AAAATGGATGTCAAAGCATTTGCCAATAAAGCTAAGAAATACGTTCAAGAAAAAGACTTT 16976 |||||||||| ||||||||||| || |||||||| || ||| ||||||||||||| Sbjct 65823 GAAATGGATGTAAAAGCATTTGCTCGCAAGGCTAAGAAGTATGTTAAAGAAAAAGACTTC 65764 Query 16977 TCGAACCAAGCAAATCAAGTGTTGAAACTTTATAACTTGACCATGAGAGTGAATCGTTTA 17036 || |||||| | | || || || || || | || ||| | || ||||| || Sbjct 65763 TCTCCGACAGCAAACAAGGAATTAAAGCTATACAATCTTACGATGCGTGTTAATCGATTG 65704 Query 17037 GAACTTCTGAAAGCAAATATTGGTCTGGAGCTTATTTCTGTATTTGATGACTTGGACAAA 17096 ||| | || || || ||||| || || || || ||| || | || | || |||| || Sbjct 65703 GAATTACTAAAGGCGAATATCGGACTTGAACTGATTGCTATGTTCAACGATATGGATAAG 65644 Query 17097 TATTTCTCA 17105 ||||||||| Sbjct 65643 TATTTCTCA 65635 Score = 136 bits (150), Expect = 9e-28 Identities = 409/617 (66%), Gaps = 22/617 (4%) Strand=Plus/Minus Query 21205 CCAGTTGATACCGGATATATGAAACGATCCATAAAAATGGAGTTGACAGAAGGTGGATTC 21264 |||||||||||||| | ||| |||||| || || ||||| |||| || ||||| || Sbjct 60724 CCAGTTGATACCGGTAACTTGAGACGATCGATCAACATGGATTTGAGTGATGGTGG-TTT 60666 Query 21265 AGCGGACAAGCTG-GGCCACACACAGATTATTCCGCATACGTTGAATATGGAACTCGTTT 21323 | | | ||| || |||| | | |||||| | | || | ||||| || || | || Sbjct 60665 AACAGGGAAGGTGAAGCCAACCGCTGATTATGCACCTTATTTGGAATACGGCACAAGGTT 60606 Query 21324 TCAATCTGCTCAACCTTTTGTAAAACCAGCTTATAATGAGCAAAAAGGCGTATTCATTAA 21383 ||| || |||||||| || | |||||||| ||| | | | |||||| | | |||| Sbjct 60605 TCAGTCGGCTCAACCATTCATGCGACCAGCTTTCAATAAAC-AGAAGGCGAAGT--TTAA 60549 Query 21384 ---AGATTTAGAAAGGTTACTCAAAT-GATTAAAACTCGAGACCAATCTATTTTTGACGA 21439 |||| | || | ||| | | | ||| || || |||| ||||| || ||||| || Sbjct 60548 ATCAGATATGGATAAGTTGGTGGAGTAGATGAAGACAAGAGAACAATCGATCTTTGATGA 60489 Query 21440 ATTGTTCAAACGAATCCAAGCTTTGGGGT---ATACCGTTTATGATTATAAGCCAATGAA 21496 | |||||||||| | || ||||| | | ||| |||||||| |||||| | Sbjct 60488 AATGTTCAAACGCTCGCTTGCATTGGGTTACCAAACC---TATGATTACAAGCCAGCAAG 60432 Query 21497 TGAAGTAGGCTATCCATTTGTTGAATTGGAAAATACTCAAACCATTCATGAAGCAAATAA 21556 | | ||||||| ||||||||||| ||| |||| ||||| ||||| | | || Sbjct 60431 CTCTGCAAGCTATCCTTTTGTTGAATTCGAAGATACACAAACGATTCACTCTACTACCAA 60372 Query 21557 AACGGATATTAAAGGCACAGT-AAGTCTTTCATTATCTGTTTGGGGCTTACAGAAGAAGC 21615 | | || | || | || | | ||||| ||||| ||||| || || | |||| Sbjct 60371 ATCTCATGTCTTGGGAAATGTCGTGATTGTCATT-TCTGTATGGGGTTTGCACACAAAGC 60313 Query 21616 GCAAGGAAGTGTCTGACATGGCAAGCAATATATTTAATCAAGCATTGAATATAAGTGCCA 21675 | || | |||||||| ||||| | | ||| | ||||| || | | | | | Sbjct 60312 GAAAACAGGTGTCTGAGATGGCGTCTGCTTTGTTTGAACAAGCGATGCAAGTGAATACAT 60253 Query 21676 CAGATGGCTATTCTTGGGCTTTGAATTCACAAGCAAGTACCATTCAAATGCTGGACGATA 21735 | || || ||||||||| | || | | | ||||| ||| || | | |||| Sbjct 60252 CTGAGGGTTATTCTTGGACGTTAGACACCAATGCAAGCGACATACAGACAGTAACAGATA 60193 Query 21736 CAACAACAAATACACCGCTTAAAAGAGCGTTGATTAACTTAGAATTTAGACTAAGATAGG 21795 ||| ||||| |||||||| ||| ||||| | ||| | || | ||||| || ||||| Sbjct 60192 CAAGCACAAACACACCGCTCAAACGAGCGATTATTGAATTGAATTTTAGGTTA--ATAGG 60135 Query 21796 AG--ATTTAATATGGCA 21810 || |||||| |||||| Sbjct 60134 AGGAATTTAA-ATGGCA 60119 >seq14859 Length=68005 Score = 163 bits (180), Expect = 7e-36 Identities = 263/374 (70%), Gaps = 3/374 (1%) Strand=Plus/Plus Query 29106 AATG-GGTTGGAGAACGAGTCCAATCACCGGAGCGCAAGAATTTCACAATGCTATGGACT 29164 |||| || ||||| | |||||||| | | |||||||| || |||| || || | Sbjct 44258 AATGTGGATGGAGGAAAAGTCCAATTAATAATGAACAAGAATTCCATAATGGAATTGATT 44317 Query 29165 TGGTTAATGGAAATCCAACAACTCCAATCTTAGCTTCTGGCGATGGTCAAGTGGTCCAAG 29224 | | ||||||||||| | || || || || || || |||||| |||| || || | Sbjct 44318 TTATAAATGGAAATCCTAATACACCTATTTTTGCAGCTTTAGATGGTGAAGTTGTTCAGG 44377 Query 29225 CGGGAAGTAATTATTATGACTGGTATGGAAATTACACGGTCATCAAGCATGCGGATGGGC 29284 |||| ||||||||||||||||||||| |||||| ||| || || ||| |||| Sbjct 44378 CGGGTGCTAATTATTATGACTGGTATGGTAATTACGTGGTTATTAAACATAATAATGGAA 44437 Query 29285 TTTATACAGGGTACGCACATCAAAGCAGAATCGATGTTTCTGTGGGTCAAAATGTTAAAA 29344 | ||||| || || ||| | | || ||||||||||| || ||||| || | | Sbjct 44438 AGTGGACAGGTTATGCTCATTTATCTCGTATTGATGTTTCTGTTGGACAAAAAGTCCAGA 44497 Query 29345 AGGGCCAACAAATTGGACTTATGGGAGCGACTGGTCCGGTCACTGGACCACATTTGCACT 29404 | ||| |||||||| | |||||| | |||||||| |||||| |||| | || | Sbjct 44498 AAGGCGCTCAAATTGGCTTGATGGGAACAACTGGTCCATCTACTGGAGAACATCTACATT 44557 Query 29405 TCCAATTCATGGACCAATATTGGCCATCATCAAG-CGCTCACTTTAAGAATCCAAGGGAT 29463 | ||| | ||| | | |||||||| ||| | || | | | ||| |||||||||| || Sbjct 44558 TTCAAATTATGAAAAATTATTGGCC-TCAGCCAGTTGTTGATTTTGAGAATCCAAGAAAT 44616 Query 29464 TATATCAAATTTTA 29477 |||||| ||||||| Sbjct 44617 TATATCCAATTTTA 44630 Score = 100 bits (110), Expect = 7e-17 Identities = 214/316 (68%), Gaps = 8/316 (3%) Strand=Plus/Plus Query 6168 ATGATTAACAACGTTGTATTAGTAGGTCGCTTAACTCGTGACCCTGAACTTAGATATACA 6227 |||||||| |||||||||||||| || || |||||| ||||| || | ||| |||| Sbjct 19978 ATGATTAATAACGTTGTATTAGTGGGACGGTTAACTAAGGACCCAGACATAAGAAATACT 20037 Query 6228 CCACA--GAACCAAGCAGTAGGCACATTTGGATTAGCTGTAAATCGTCAGTTTAAGAACG 6285 | ||| |||| | | | | | ||| | |||| || || ||| | ||||| || Sbjct 20038 CAACAAGGAACGACGA--TCGCTAGTTTTACACTAGCGGTCAACCGTAACTTTAAAGACC 20095 Query 6286 CCAATGGAGAGCGAGAAGCTGACTTCATTAATTGTGTTATTTGGCGACAACAAGCCGAAA 6345 |||||| |||| ||||| || || |||||||||||| |||||| | ||| | | Sbjct 20096 AAAATGGAAAGCGTGAAGCAGATTTTATTAATTGTGTTGCTTGGCGTAAGACAGCTG--A 20153 Query 6346 ATTTAGCCAAATT--TGCTAAAAAAGGCGCTTTGATTGGAATAACTGGACGAATTCAAAC 6403 | | | | ||| | || || || || |||||| || ||||| ||||||| Sbjct 20154 ACTAATCGAAAATCATGTTAGTAAGGGGCAACAGATTGGTGTAGTAGGACGTGTTCAAAC 20213 Query 6404 ACGAAACTATGAGAACCAACAAGGACAAAAAGTTTATGTTACCGAAGTTGTTGCAGATAC 6463 ||| || || || || ||||| || ||||||| || || ||| |||||| | || Sbjct 20214 ACGGTCGTACGATAATCAGCAAGGGCAGAAAGTTTTCGTGACGGAAATTGTTGTAAATGA 20273 Query 6464 TTTCCAAATGCTAGAA 6479 || ||| | ||||| Sbjct 20274 ATTGCAATTTTTAGAA 20289 >seq1539 Length=57711 Score = 136 bits (150), Expect = 9e-28 Identities = 225/322 (70%), Gaps = 2/322 (1%) Strand=Plus/Minus Query 6164 AATAATGATTAACAACGTTGTATTAGTAGGTCGCTTAACTCGTGACCCTGAACTTAGATA 6223 || |||||| || || || |||||||| || ||||| || || || | | || Sbjct 16177 AAAAATGATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCCCGATTTACGTTA 16118 Query 6224 TACACCACAGAACCA-AGCAGTAGGCACATTTGGATTAGCTGTAAATCGTCAGTTTAAGA 6282 ||| || || || |||||| | ||| ||| ||||| || ||||| | |||| || Sbjct 16117 TACCGCA-AGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGA 16059 Query 6283 ACGCCAATGGAGAGCGAGAAGCTGACTTCATTAATTGTGTTATTTGGCGACAACAAGCCG 6342 | || || | ||||||||||| || || |||||||| |||||||| ||| ||| | Sbjct 16058 ATCAAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGG 15999 Query 6343 AAAATTTAGCCAAATTTGCTAAAAAAGGCGCTTTGATTGGAATAACTGGACGAATTCAAA 6402 ||| | || | ||| |||||||| || ||| || || | ||||| ||||||| Sbjct 15998 AAACGATGGCTACATTAGCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAA 15939 Query 6403 CACGAAACTATGAGAACCAACAAGGACAAAAAGTTTATGTTACCGAAGTTGTTGCAGATA 6462 | || | ||||| ||||| |||||||| || || || || |||||||| || |||| Sbjct 15938 CGCGGACTTATGACAACCAGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATA 15879 Query 6463 CTTTCCAAATGCTAGAAAGCAA 6484 ||||||| | ||||||| || Sbjct 15878 ATTTCCAACTATTAGAAAGTAA 15857 >seq1464 Length=66918 Score = 122 bits (134), Expect = 2e-23 Identities = 217/314 (69%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 6169 TGATTAACAACGTTGTATTAGTAGGTCGCTTAACTCGTGACCCTGAACTTAGATATACAC 6228 ||||||| ||||||||| |||| || || | || || || || | |||||||| Sbjct 17855 TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACAT 17914 Query 6229 CACAGAACCAA-GCAGTAGGCACATTTGGATTAGCTGTAAATCGTCAGTTTAAGAACGCC 6287 || || || || |||| || || |||||||| |||||| | || | || | Sbjct 17915 CA-AGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAA 17973 Query 6288 AATGGAGAGCGAGAAGCTGACTTCATTAATTGTGTTATTTGGCGACAACAAGCCGAAAAT 6347 || || | || || || || || ||||||||||| ||||||||| || ||| |||| Sbjct 17974 AACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACA 18033 Query 6348 TTAGCCAAATTTGCTAAAAAAGGCGCTTTGATTGGAATAACTGGACGAATTCAAACACGA 6407 |||| || | ||| | ||||| || | | || ||||||| || |||||||| || Sbjct 18034 CTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGT 18093 Query 6408 AACTATGAGAACCAACAAGGACAAAAAGTTTATGTTACCGAAGTTGTTGCAGATACTTTC 6467 ||||| || |||||||||||| || || || || ||||| ||||| || | ||| Sbjct 18094 TCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTC 18153 Query 6468 CAAATGCTAGAAAG 6481 ||| | | ||||| Sbjct 18154 CAATTATTGGAAAG 18167 >seq3145 Length=45091 Score = 111 bits (122), Expect = 4e-20 Identities = 220/320 (69%), Gaps = 7/320 (2%) Strand=Plus/Plus Query 6163 AAATAATGATTAACAACGTTGTATTAGTAGGTCGCTTAACTCGTGACCCTGAACTTAGAT 6222 ||||| |||||||||| || |||||||| || ||||| |||||||| | | | Sbjct 1790 AAATA-TGATTAACAATGTGACTTTAGTAGGACGTTTAACGAAAGACCCTGATTTGCGCT 1848 Query 6223 ATAC-ACCACAGAACCAAGCAGTAGGCACATTTGGATTAGCTGTAAATCGTCAGTTTAAG 6281 |||| | | | | ||| || | |||||| | || || ||||| | |||| Sbjct 1849 ATACGAGCGGTGGAA-AAGGTGTGGCTACATTTACCCTTGCAGTTAATCGAAACTTTACC 1907 Query 6282 AACGCCAAT--GGAGAGCGAGAAGCTGACTTCATTAATTGTGTTATTTGGCGACAACAAG 6339 || ||| |||||||| ||||| |||||| || | ||||| |||||| | ||| || Sbjct 1908 AAT--CAAGCCGGAGAGCGTGAAGCAGACTTCGTTCAATGTGTGATTTGGAGGAAACCAG 1965 Query 6340 CCGAAAATTTAGCCAAATTTGCTAAAAAAGGCGCTTTGATTGGAATAACTGGACGAATTC 6399 | |||| | || || | |||| | || | ||| | || | || |||||||||| Sbjct 1966 CGGAAACACTGGCTAATTATGCTCGCAGGGGAACCTTGCTAGGCGTGACCGGACGAATTC 2025 Query 6400 AAACACGAAACTATGAGAACCAACAAGGACAAAAAGTTTATGTTACCGAAGTTGTTGCAG 6459 ||||||| ||||| || || ||||| ||| |||||||| || |||||||| |||| Sbjct 2026 AAACACGTTCTTATGACAATCAGCAAGGGCAACGTGTTTATGTAACGGAAGTTGTAGCAG 2085 Query 6460 ATACTTTCCAAATGCTAGAA 6479 | | ||| ||| || | ||| Sbjct 2086 AGAATTTTCAATTGTTGGAA 2105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120183895568232