Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq95541 131 2e-25 >seq95541 Length=3042 Score = 131 bits (144), Expect = 2e-25 Identities = 165/225 (73%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 ||||||| ||| ||||||||| || ||||| || ||||| ||||||| |||||||| Sbjct 1445 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTCAATCCGGGCATCAGACCTCGTTT 1502 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 ||| ||||||||||||| ||| || || || || |||||||||||||| || ||||| Sbjct 1503 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAA 1562 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403 || |||| ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 1563 AGCAATTATACGTTCTCCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 1622 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | || || |||| | | | |||||||| ||||| ||||| Sbjct 1623 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 1667 Score = 109 bits (120), Expect = 5e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 || ||||| ||||| | ||| ||||| || || || | ||||||||||| || ||| Sbjct 2372 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 2431 Query 14534 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAA 14593 |||||||| || || || ||||| | | ||| |||||| | || | || |||| Sbjct 2432 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAG 2491 Query 14594 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14653 || |||||||| ||||||||| ||||||||| ||||| || | | || ||||| | | Sbjct 2492 TTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGT 2551 Query 14654 TGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCT 14693 | ||| || | | | | | |||||| ||||| |||| Sbjct 2552 TTCTCACAATCTTTTAATGTCTCCCAATCTGCTAAGTCCT 2591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481380402337120