Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_003157.5
Length=43106
Score E
Sequences producing significant alignments: (Bits) Value
seq1464 192 2e-44
seq1539 150 5e-32
seq2203 123 7e-24
>seq1464
Length=66918
Score = 192 bits (212), Expect = 2e-44
Identities = 235/318 (74%), Gaps = 2/318 (1%)
Strand=Plus/Plus
Query 9664 TGATTAATAATGTAGTACTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAG 9723
|||||||||| || ||||||||||| || |||| || || |||| | || ||||||
Sbjct 17855 TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACAT 17914
Query 9724 CGAGTCAAGTAGCTGTAGCTACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAG-CAA 9782
| ||| |||||||| |||||||| | || || || || | | || | ||| |||
Sbjct 17915 CAAGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTA-ACTTCACGAGCCAA 17973
Query 9783 AACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCTGGCGACAGTCTGCTGAAAAT 9842
||||| | | || || ||||| ||||| ||||| || |||||| | || || ||||
Sbjct 17974 AACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACA 18033
Query 9843 TTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT 9902
|||| |||| || | ||||| || | | || || || ||||||||||| || |||
Sbjct 18034 CTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGT 18093
Query 9903 AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTC 9962
|| || || ||||||||||||||||| || ||||||||||| ||||| || || |||
Sbjct 18094 TCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTC 18153
Query 9963 CAAATGTTGGAAAGTCGT 9980
||| | ||||||||||||
Sbjct 18154 CAATTATTGGAAAGTCGT 18171
>seq1539
Length=57711
Score = 150 bits (166), Expect = 5e-32
Identities = 240/342 (70%), Gaps = 2/342 (1%)
Strand=Plus/Minus
Query 9637 ATTAAAAAAGAAA-GCAGAGCaaaaaaaTGATTAATAATGTAGTACTAGTTGGTCGCATG 9695
|| || | ||||| | |||| | ||||||||| ||||||||| |||| || || |
Sbjct 16199 ATGAACAGAGAAATGGAGAG-ATAAAAATGATCAATAATGTAACTTTAGTAGGACGGTTA 16141
Query 9696 ACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGCTACGTTCACACTT 9755
||||| || | || | || ||||| || ||| ||| || || || || || |
Sbjct 16140 ACCAAAGATCCCGATTTACGTTATACCGCAAGTGGCACAGCAGTGGCCACTTTTACCTTA 16081
Query 9756 GCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGT 9815
|| || || |||| |||| | |||||||| | ||||||| ||||| || || |||
Sbjct 16080 GCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGAGAAGCTGATTTTATCAATTGT 16021
Query 9816 GTTATCTGGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATC 9875
|| || ||||| | | || |||| | || | | |||||||| ||| ||| |||
Sbjct 16020 GTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTAGCTAAAAAGGGTAGTTTAATC 15961
Query 9876 GGAGTTACGGGTCGTATTCAGACACGTAACTACGAAAACCAACAAGGACAACGTGTCTAT 9935
|| || || || ||||| || || | || || ||||| |||||||| ||||||||
Sbjct 15960 GGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAACCAGCAAGGACAGCGTGTCTAC 15901
Query 9936 GTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGT 9977
|| || |||||||| || |||||||||||| | || ||||||
Sbjct 15900 GTGACTGAAGTTGTGGCCGATAATTTCCAACTATTAGAAAGT 15859
>seq2203
Length=131112
Score = 123 bits (136), Expect = 7e-24
Identities = 242/350 (69%), Gaps = 6/350 (2%)
Strand=Plus/Plus
Query 17504 AATCACCTTGTGACTGCTTATAATCAAGAACAAGCTTATCGTTTGTTTATCGACGGCGAT 17563
||||| |||||| ||||||||| ||||||||||| || | ||||||| || | ||
Sbjct 1504 AATCATCTTGTGCTTGCTTATAACCAAGAACAAGCCTACAGAATGTTTATGGATTGTGAA 1563
Query 17564 GG-TACGGGTTTGATGCATATATTTGACGGTAACTGC-GAAATAAAACACGACGAGCGTG 17621
|| | ||| | || ||||| |||| | | ||| ||||| |||||| |||| ||
Sbjct 1564 GGATTCGGACTGGAA-CATATCTTTGCCAGCTG-TGCTGAAATTCGACACGATGAGCATG 1621
Query 17622 GAGATCACTTGTTAATCACGACACCAAAAGGCAATAAGCGCGTTTATTATAAAGGCGGCG 17681
||||||| || | |||| |||| | || | ||||| | ||||||||||||||||
Sbjct 1622 GAGATCATTTATGGATCAATCTACCAGAGGGAGAAAAGCGGATCTATTATAAAGGCGGCG 1681
Query 17682 GTAAAGTTAACAGTGTTGGTGCTATTACAGGTATGTCTTTAGGATCAGT-AGTATTCTGC 17740
| ||||| || ||| ||||| || || |||||||| || ||| | || | | || ||
Sbjct 1682 GAAAAGTAAATGCTGTCGGTGCCATCACTGGTATGTCATTTGGAACTGTCACTTTTTTG- 1740
Query 17741 GAGATTAACTTACTGCACATGGATTTTATCCAGGAGTGTTTTAGGCGTACTTGGGCGGCT 17800
|| | || | || ||| | |||| | ||| |||| | || ||| || ||
Sbjct 1741 GAATTCAATCTGCTTAACAAAGCAGTTATAGATGAGGCTTTTCGTCGGACTAAAGCTTCT 1800
Query 17801 AAGCTACGTTATCATCTAGCAGATTTAAATCCCCCAGCACCTCAACATCC 17850
| | ||||||||||| || || ||||| |||||||| | |||||
Sbjct 1801 AGTTTTCGTTATCATCTCGCTGAACAGAATCCGCCAGCACCAAATCATCC 1850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137555609086944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |