Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_003216.1
Length=40834
Score E
Sequences producing significant alignments: (Bits) Value
seq1539 149 2e-31
seq1464 132 1e-26
seq3145 129 2e-25
seq7607 109 1e-19
seq14859 96.9 9e-16
>seq1539
Length=57711
Score = 149 bits (164), Expect = 2e-31
Identities = 229/322 (71%), Gaps = 6/322 (2%)
Strand=Plus/Minus
Query 37622 AATGATGAATCGTGTAGTACTT--GTAGGACGATTAACTAAAGACCCTGATTTACGTTAC 37679
|||||| ||| |||| |||| |||||||| ||||| ||||| || |||||||||||
Sbjct 16174 AATGATCAATAATGTA--ACTTTAGTAGGACGGTTAACCAAAGATCCCGATTTACGTTAT 16117
Query 37680 ACTCCAGCCGGCGCGGCTGTTGCGACTTTTACGCTAGCAGTAAATCGTATGTTCACTAAT 37739
|| || ||| | || || || |||||||| |||| || ||||| | || || |||
Sbjct 16116 ACCGCAAGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAAT 16057
Query 37740 CAAAACGGAGAACGAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGCAAACCAGCAGAA 37799
|||||||| | |||||||| ||||| || |||||||| ||||||| |||||||| |||
Sbjct 16056 CAAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAA 15997
Query 37800 AACGTTGCTAATTTCTTGAAGAAAGGAAGCATGGCGGGCGTTGATGGACGTGTTCAAACT 37859
| | |||| || || || || || | ||||| | ||||| |||||||
Sbjct 15996 ACGATGGCTACATTAGCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACG 15937
Query 37860 CGTAATTATGAGGATAACGACGGTAAACGTGTTTTCGTTACTGAGGTAGTTGCTGAATCA 37919
|| | |||||| | | | || | ||||| | ||| ||||| || || || | || |
Sbjct 15936 CGGACTTATGACAACCAGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTGGCCG-ATAA 15878
Query 37920 GTT-CAATTCTTAGAACCTAAA 37940
|| ||| | |||||| ||||
Sbjct 15877 TTTCCAACTATTAGAAAGTAAA 15856
>seq1464
Length=66918
Score = 132 bits (146), Expect = 1e-26
Identities = 216/311 (69%), Gaps = 0/311 (0%)
Strand=Plus/Plus
Query 37624 TGATGAATCGTGTAGTACTTGTAGGACGATTAACTAAAGACCCTGATTTACGTTACACTC 37683
|||| ||| || ||||| || ||||| | || ||||| || |||||||| || ||
Sbjct 17855 TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACAT 17914
Query 37684 CAGCCGGCGCGGCTGTTGCGACTTTTACGCTAGCAGTAAATCGTATGTTCACTAATCAAA 37743
|| ||| | ||||| || || || || |||| || ||||||| ||||| | ||||
Sbjct 17915 CAAGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAAA 17974
Query 37744 ACGGAGAACGAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGCAAACCAGCAGAAAACG 37803
|||| | || || || ||||| ||||||||||| ||||||| ||| |||||||||
Sbjct 17975 ACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACAC 18034
Query 37804 TTGCTAATTTCTTGAAGAAAGGAAGCATGGCGGGCGTTGATGGACGTGTTCAAACTCGTA 37863
| || || | | ||||||| | || || ||| ||| ||||||| |||
Sbjct 18035 TAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGTT 18094
Query 37864 ATTATGAGGATAACGACGGTAAACGTGTTTTCGTTACTGAGGTAGTTGCTGAATCAGTTC 37923
|||||| || | | || ||||||| | ||| || || |||||||||||| | |
Sbjct 18095 CTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTCC 18154
Query 37924 AATTCTTAGAA 37934
|||| || |||
Sbjct 18155 AATTATTGGAA 18165
>seq3145
Length=45091
Score = 129 bits (142), Expect = 2e-25
Identities = 230/332 (69%), Gaps = 8/332 (2%)
Strand=Plus/Plus
Query 37612 GAGGAAAACGAATGATGAATCGTGTAGTACTT--GTAGGACGATTAACTAAAGACCCTGA 37669
|||||||| ||||| || ||| |||| |||||||| ||||| |||||||||||
Sbjct 1783 GAGGAAAAAATATGATTAACAATGTG--ACTTTAGTAGGACGTTTAACGAAAGACCCTGA 1840
Query 37670 TTTACGTTACACTCCAGCCGGCGCGGCTGTTGCGACTTTTACGCTAGCAGTAAATCGTAT 37729
||| || || || | || | ||| || || ||||| || ||||| ||||| |
Sbjct 1841 TTTGCGCTATACGAGCGGTGGAAAAGGTGTGGCTACATTTACCCTTGCAGTTAATCGAAA 1900
Query 37730 GTTCACTAATCAAAACGGAGAACGAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGCAA 37789
|| || |||||| |||||| || |||||||| ||| || | ||||| ||||| | ||
Sbjct 1901 CTTTACCAATCAAGCCGGAGAGCGTGAAGCAGACTTCGTTCAATGTGTGATTTGGAGGAA 1960
Query 37790 ACCAGCAGAAAACGTTGCTAAT--TTCTTGAAGAAAGGAAGCATGGCGGGCGTTGATGGA 37847
|||||| |||| | |||||| | || | || |||| | || ||||| |||
Sbjct 1961 ACCAGCGGAAACACTGGCTAATTATGCTCGCAG--GGGAACCTTGCTAGGCGTGACCGGA 2018
Query 37848 CGTGTTCAAACTCGTAATTATGAGGATAACGACGGTAAACGTGTTTTCGTTACTGAGGTA 37907
|| ||||||| ||| |||||| || | | || ||||||||| || || || ||
Sbjct 2019 CGAATTCAAACACGTTCTTATGACAATCAGCAAGGGCAACGTGTTTATGTAACGGAAGTT 2078
Query 37908 GTTGCTGAATCAGTTCAATTCTTAGAACCTAA 37939
|| || || ||||||| || ||| ||||
Sbjct 2079 GTAGCAGAGAATTTTCAATTGTTGGAATCTAA 2110
>seq7607
Length=81728
Score = 109 bits (120), Expect = 1e-19
Identities = 157/218 (72%), Gaps = 5/218 (2%)
Strand=Plus/Minus
Query 34781 AATATGGGAAGTTAGACCAGAGA-ACTTGGAAAGATGATATaaaaaaaGGATTTAGCGAA 34839
|||| || || ||||| | ||| || ||| ||| ||||||||| | || | ||
Sbjct 75977 AATACGGACAGCTAGACAA-AGATACCTGGCCAGAAGATATAAAACAGGGTATGTCAGAG 75919
Query 34840 TGTATGAGAGTTTTGAAACCGAACGGAACATTAATTTTCAAATGGAACGAAGACCAAATA 34899
|||||| | ||||| || || ||||||||||| |||||||||||||| || |||| ||
Sbjct 75918 TGTATGCGTGTTTTAAAGCCCAACGGAACATTGATTTTCAAATGGAATGAGAACCAGGTA 75859
Query 34900 AAGCTAAGCGAGATTTTAAAGATAATTGA---TTTTGAACCGCTTTTCGGTAATAAGCGT 34956
|| || | || ||||||| |||||| || ||| | || || ||||| |
Sbjct 75858 AAACTCAAAGATGTTTTAAAATCAATTGAACCATTCAGACCTTTGTTTGGAAATAAAAGG 75799
Query 34957 TCTAAAACGCACTGGCTAGTTTTTATGAAGGAGGAACA 34994
| | || |||||| ||||||||||||||||||||||
Sbjct 75798 AGTCAGACACACTGGTTAGTTTTTATGAAGGAGGAACA 75761
>seq14859
Length=68005
Score = 96.9 bits (106), Expect = 9e-16
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 37612 GAGGAAAACGAATGATGAATCGTGTAGTACTTGTAGGACGATTAACTAAAGACCCTGATT 37671
||||| | | ||||| ||| || ||| | || ||||| |||||||| ||||| ||
Sbjct 19967 GAGGATTAAGCATGATTAATAACGTTGTATTAGTGGGACGGTTAACTAAGGACCCAGACA 20026
Query 37672 TACGTTACACTCCAGCCGGCGCGGCTGTTGCGACTTTTACGCTAGCAGTAAATCGTATGT 37731
|| | | |||| | || || | | || | |||||| ||||| || || |||| |
Sbjct 20027 TAAGAAATACTCAACAAGGAACGACGATCGCTAGTTTTACACTAGCGGTCAACCGTAACT 20086
Query 37732 TCACTAATCAAAACGGAGAACGAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGCAAAC 37791
| | | ||||| ||| | || ||||||||||| ||||||||||||| |||||| ||
Sbjct 20087 TTAAAGACCAAAATGGAAAGCGTGAAGCAGATTTTATTAATTGTGTTGCTTGGCGTAAGA 20146
Query 37792 CAGCAGAA 37799
|||| |||
Sbjct 20147 CAGCTGAA 20154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130299030099168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |