Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_003291.2 Length=37618 Score E Sequences producing significant alignments: (Bits) Value seq14088 93.3 1e-14 seq1361 82.4 2e-11 >seq14088 Length=28720 Score = 93.3 bits (102), Expect = 1e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 21772 ATAAGGGTTATCTGTTCGACCAAGCAAATAATCTGTTGACACGTTGAAGTAGTCAGCAAC 21831 || |||||| ||||| || || || | || || |||| || ||||||||| || || Sbjct 4229 ATTAGGGTTGTCTGTGCGTCCTAGTAGGTAGTCAGTTGTTACACCGAAGTAGTCGGCGAC 4170 Query 21832 TTTTTGGAGCTTATCAGATGAAGGGTTATTTTGTTTCCATGAATATATAGAATTTTTGCC 21891 |||| || || || | ||| |||||| ||||||||||||| | |||||| || Sbjct 4169 TTTTGTCAGGTTTGCACCAGTAGGAATATTTTTATTCCATGAATATAGAACATTTTTTCC 4110 Query 21892 AAAACCAACATCAGATTCTAACTTAGAAACAGCAATACCACGTTTTTTACACAATTCTTT 21951 |||||| | | ||| || ||| | | || || | |||||||| ||| ||| Sbjct 4109 AAAACCTAGTTTTTCTTCCAATTTATTTATCGATATCCCTTGGTTTTTACATAATAATTT 4050 Query 21952 TACTCTATCAAATGCTGTCATAACAACCACC 21982 || ||| ||||| ||| ||||| ||||| || Sbjct 4049 TAATCTTTCAAAAGCTATCATAGCAACCTCC 4019 >seq1361 Length=62553 Score = 82.4 bits (90), Expect = 2e-11 Identities = 125/178 (70%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 21776 GGGTTATCTGTTCGACCAAGCAAATAATCTGTTGACACGTTGAAGTAGTCAGCAACTTTT 21835 || |||||||||| ||||| |||||||| |||| ||| | || || |||||||||||| Sbjct 12221 GGTTTATCTGTTCTTCCAAGTAAATAATCAGTTGTCACATCAAAATAATCAGCAACTTTT 12162 Query 21836 TGGAGCTTATCAGATGAAGGGTTATTTTGTTTCCATGAATATATAGAATTTTTGCCAAAA 21895 || | || |||| |||||| | || |||||| |||||| | || | |||| Sbjct 12161 TGAATTTTGTCAGTAGAAGGGGTGCGTTTATTCCATTGATATATTGTGTTCCTTCCAATT 12102 Query 21896 CCAACATCAGATTCTAACTTAGAAACAGCAATACCACGTTTTTTACACAATTCTTTTA 21953 | | | | ||| | | | ||||| |||||||||| ||||| | || ||||| Sbjct 12101 TCGATTTTATCTTCAAGTTGATAAACACTGATACCACGTTGATTACATAGTTTTTTTA 12044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120027393644640