Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq11297 536 1e-147
seq95541 136 4e-27
>seq11297
Length=12984
Score = 536 bits (594), Expect = 1e-147
Identities = 1188/1762 (67%), Gaps = 31/1762 (2%)
Strand=Plus/Minus
Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864
|||| ||||| ||| | |||||| | | || |||||||| ||||||| |||| | ||
Sbjct 12726 ATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCTGTTTTTAATCCCATTTTC 12667
Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924
|| ||| ||||| || || |||||| | || |||| ||| | | || ||| |
Sbjct 12666 CAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAGGTTTAGCAACATGTATGTTA 12607
Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984
| |||||||||||||||||||| || ||||| || |||||||| | || | || ||
Sbjct 12606 AAAGATTGACTTTGATCTATAAAAGCTCCTCTATCAGCTGCCATCTGTA---TGGATGTT 12550
Query 36985 T---GAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTA-- 37039
| | || |||||||| || ||||| || | | | |||| || | | | || | |
Sbjct 12549 TTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTAT-TTCTTTAGGAATTTTTTC 12491
Query 37040 AATGT--TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACAT 37097
||| | || ||||| ||||| | | | ||| ||| || || || | || |||||
Sbjct 12490 AATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCATATCTTCATCCCACAA 12431
Query 37098 ATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAA 37157
|| | | | || ||| || || | || || || |||| |||||||||||
Sbjct 12430 ATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACTACAGGAAATTCTCCAGATAA 12371
Query 37158 TACTCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAAT 37215
||||||||| ||| |||| ||| | ||| | ||||||| || ||| | || | |
Sbjct 12370 GACTCTTCTTTGGTAAATAT-TTGAT-GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGA 12313
Query 37216 ATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGT 37275
||||| | ||||| ||||| ||||| || ||||| | || ||| | ||| ||||||
Sbjct 12312 ATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGT 12253
Query 37276 GTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCAC 37335
| || | | ||| || || ||| ||||| | ||||| || | || ||||
Sbjct 12252 TTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCAC 12193
Query 37336 ATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCG 37395
|||||||| || || ||||||| || |||||| | | |||||| || | ||
Sbjct 12192 ATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTACTGTACGCACCT 12133
Query 37396 TAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATT 37455
| ||| ||||| ||| ||||||| ||||| ||| ||||||| |||||||| || |||
Sbjct 12132 TCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATT 12073
Query 37456 TGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT-AATATAAACAC 37514
||| ||| | | | |||||| || || ||| | | ||| | || || | |||| |
Sbjct 12072 TGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAG-ATATTCTCATCAACACAAACGC 12014
Query 37515 ATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGA 37574
||| |||| ||||||||||| ||||| || ||||||||| || |||| || | |
Sbjct 12013 ATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGC 11954
Query 37575 TTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTT 37634
||| || |||||| |||| | ||| || | ||| |||| ||||| | || || ||
Sbjct 11953 TTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTT 11894
Query 37635 CGTAATTATTCTCAACTTGTCGAACATAAATACGTTATTATTAACAAATTTACTCAACGA 37694
|| ||| | | || || | || ||||| |||||| | |||||| | | | |
Sbjct 11893 TGTGATTTCTTTTAATTTTTTAAAATTAAATCTGTTATTTTCAACAAACATGTTAAGTGC 11834
Query 37695 AATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGT 37754
|| || | || || || || || ||||||||||| | | |||| | || ||| ||
Sbjct 11833 TATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGT 11774
Query 37755 ACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGA 37814
|| ||||| || || |||| || || | ||| ||||||| ||| | |||||||
Sbjct 11773 GCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGC 11714
Query 37815 ATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCA 37874
||| ||||| | || || || || || || | ||| || || ||||| || |||||
Sbjct 11713 ATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTCCA 11654
Query 37875 TAAACTTCTT--GCTTTAACGATCGCTTT---AAt-ttttttCTTTGTTTCGTATTCTAT 37928
||| |||| ||| | || | | ||| ||| |||||||| ||| ||||
Sbjct 11653 TAA--CTCTTGAGCTCTGAC--TTGTTTTATAAATCGTTTTTCTT--CTTCATATTTGGC 11600
Query 37929 ATATAATTTGTTAAAATCATTCCCCCATACA-TCGCATAATCCTGGACATTCGCATGGAC 37987
|||| | || || |||| || || | || || | || ||||| || ||||
Sbjct 11599 ATAT-AGTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACAATCATGAGGAC 11541
Query 37988 ACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATA 38047
|||| ||| ||| ||||||| |||||||| | || |||||| | ||| |||| |||||
Sbjct 11540 ACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATA 11481
Query 38048 ATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTA 38107
| ||| ||| | ||| | | ||| |||||| || ||| ||||| |||| |
Sbjct 11480 AAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTGTTCTTCTTTAAATCCA 11421
Query 38108 GAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTT 38167
|| || |||||||| || ||||| || |||| |||||| | | ||| || || | ||
Sbjct 11420 AGAATTCAAATATATCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTT 11361
Query 38168 TATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTA 38227
| | || || |||| | |||||| | || || ||||| | ||| ||||| || ||||
Sbjct 11360 TGTTTCCACCTTGATCTACATATCTGGCGGTATTGTTATACACTCTCAACATTGGCACTA 11301
Query 38228 TACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTA 38287
|||||| || || || | || | ||| |||| ||||| ||||| || | |
Sbjct 11300 GACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTG 11241
Query 38288 TCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAA 38347
| || ||||| ||||| ||| ||| || ||||| || ||||||||||| |||||||
Sbjct 11240 TATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAA 11181
Query 38348 ATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCA 38407
| |||||||| || || ||||| || || | || | ||||| || | || |||
Sbjct 11180 AAATACCTTCAATGCTATCATCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGCC 11121
Query 38408 ATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAAT 38467
|| || | ||| || | |||||| ||||||| | || |||| || ||||
Sbjct 11120 GCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCA 11061
Query 38468 AATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCA 38527
|||||| || | ||| || ||| || || | || ||||| |||| || || ||||
Sbjct 11060 TATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATGCCTATGGAGACTCTCA 11001
Query 38528 TTAGCATATGTTGTGGTCTTTC 38549
| ||||| ||||| || |||||
Sbjct 11000 TAAGCATGTGTTGAGGCCTTTC 10979
>seq95541
Length=3042
Score = 136 bits (150), Expect = 4e-27
Identities = 170/229 (74%), Gaps = 8/229 (3%)
Strand=Plus/Plus
Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949
||| |||| |||||| || ||||||||| ||||| |||||||||| ||||||||||||
Sbjct 2365 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 2424
Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACATCCACATAAAATCTTT 12008
|||||||| |||||||| || | || || | ||| || || || | || | |
Sbjct 2425 AATTTGAAAACCATAGAAGCACCTGGCTTCAG-TCACTTGAACCTCTTGTGAGAAACGCT 2483
Query 12009 CCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTA 12068
|| | || |||||||| |||||||||||| || |||||| ||||||| | ||| || |
Sbjct 2484 CCACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGA 2543
Query 12069 TAAAGTATTTTTC---GTCTTTAGTTAATTTATCCCAATCATCTAAATC 12114
|||| | ||| || |||| ||||| | |||||||| |||| ||
Sbjct 2544 TAAAATGTTTCTCACAATCTT---TTAATGTCTCCCAATCTGCTAAGTC 2589
Score = 109 bits (120), Expect = 5e-19
Identities = 150/209 (72%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725
|| |||||||| || || ||||||||||||| ||||||||||| | |||||||||
Sbjct 1459 ATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATT 1518
Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT 11785
| |||||| || || || ||||||||||| || |||||||| || | || | ||||
Sbjct 1519 GAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCAATTATACGTTCT 1578
Query 11786 CCATAT---ACCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACG 11842
||| || || | ||||| ||||| | | ||||| || || ||||| || ||
Sbjct 1579 CCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACA 1638
Query 11843 CATTCCATTGTTTCTATAGCGTTAAATAA 11871
||| | ||||| || || || |||||
Sbjct 1639 CATGGTAGAGTTTCAATTGCATTGAATAA 1667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 467587258448960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |