Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq20 214 1e-50
seq1641 93.3 3e-14
seq16183 89.7 4e-13
seq32113 86.0 5e-12
>seq20
Length=148542
Score = 214 bits (236), Expect = 1e-50
Identities = 422/621 (68%), Gaps = 5/621 (1%)
Strand=Plus/Minus
Query 96677 AACAAATTTACTGACAACATAAACTATTTGATTTTGCCCAATTTTACATTGTGGGATCAC 96736
||||| || || |||| ||| |||||||||| ||||| | |||| ||||||||| |||
Sbjct 87117 AACAAGTTCACCGACACCATTGACTATTTGATCTTGCCACACTTTATATTGTGGGACCAC 87058
Query 96737 AATTTTTTGGTGTTTCTCAATAAAAAATTTAACAGTAAAAAAGTGGGCGGTTTGGTAAAC 96796
|||||| | | |||||||| ||| || ||| ||| | | | | ||||| ||
Sbjct 87057 AATTTTGTCATTTTTCTCAACAAAGCGTTCAACTCCAAACACGACAACAGCTTGGTGGAC 86998
Query 96797 GTTTGGGGTGCGATGCAAAAAATATCTCTGTCTCAGGGTGTCATCAAGGATTTGATTCAA 96856
||| | | || |||||||||| || | || || ||||||| || | ||
Sbjct 86997 ATTTCGAGCGCCCTGCAAAAAATTAAACTCACACACGGCATCATCAAAGACCAATTGCAG 86938
Query 96857 AACAAAAACGGTTACGCGGGCCAATATTTGTATTCGACCTTTTTGAATACCAGTAGTTTT 96916
| ||||||||||||||| | ||||||||||||||||| ||| | || ||| ||
Sbjct 86937 AGCAAAAACGGTTACGCCGTTCAATATTTGTATTCGACGTTTCTCAACACCGCCTCCTTC 86878
Query 96917 TACGCAAACGTGCTTTGTTTGAACGGTGCGAACGAAATTGTGCCACCTCAAATGAGCATA 96976
|| || ||||||| ||||||||||| | |||||||| || || || | ||| |
Sbjct 86877 TATGCCAACGTGCAGTGTTTGAACGGCGTCAACGAAATCGTTCCGCCGCGCGCCAGCGTC 86818
Query 96977 GACAGATATTACGGTAGACGTGTAGATAATGTGCGCGTTTGGAATACTCGTCACCCTAAC 97036
|| | || ||||| | || || | || ||||||| |||| || || ||||| |||
Sbjct 86817 AACCGCTACTACGGCCGGCGGGTGGGCAACGTGCGCGCCTGGACCACGCGACACCCCAAC 86758
Query 97037 ATTTCTCAGCTTTCGACTCAATTTTCACGCGTGATACAAAGCGACTCGCACA---ATTGG 97093
|| ||||| || || | || |||| | | |||||| ||| |||||
Sbjct 86757 ATCAGCCAGCTGAGCACGCAGGTGTCGGACGTGCGCCTCAACGACTCCAACACCGATTGG 86698
Query 97094 AACGTTAAAGTCGGTCTGGGCACTTTTGTTGGTGCAAATCGCGATTGCGACGGCGATAAA 97153
||||| ||||| || |||||| ||| || || || ||||||||| ||||| |||
Sbjct 86697 AACGTCAAAGTGGGCTTGGGCATATTTCCGGGCGCCAACACCGATTGCGATGGCGACAAA 86638
Query 97154 GAAGTGATAACGTTTTTGCCTTTGCCCAATTCTCTTATCGAGTTGGAGTCTCTGCTGTAC 97213
|| | || || ||| |||| ||||| ||| ||||| |||||| | | |||||
Sbjct 86637 AAAATCATCACCTTTCTGCCGCAACCCAACAGTCTCATCGACCTGGAGTGTTTATTGTAC 86578
Query 97214 AACGATCCTAAGTATTCATTT-TTGTCGTTTGATAAAAATCGGCTATCTTTTGTGTCCCA 97272
||| || || || |||| | | || || || ||||| || || ||||||||
Sbjct 86577 GGCGACCCGCGGT-TTAATTTCATATGCTTCGACAAGAATCGACTCAGCTTCGTGTCCCA 86519
Query 97273 ACAGGTGTACTATTTGTACAA 97293
||| | |||||| ||| |||
Sbjct 86518 ACAAATTTACTATCTGTTCAA 86498
Score = 127 bits (140), Expect = 2e-24
Identities = 352/536 (66%), Gaps = 8/536 (1%)
Strand=Plus/Plus
Query 217 ACTCTGTTCAAAGAGATTAGACGAGTTCATCCAGACACAATGAAACTTGTGTGTAACTGG 276
||| |||||||||||||| | || | || ||||| ||||| || ||| ||||||
Sbjct 136713 ACTTTGTTCAAAGAGATTCGCAATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGG 136772
Query 277 AGCGGAAAAGAATTCCTTCGTGAGACCTGGACTCGCTTTATCTCTGAAGAATTCCCCATC 336
||||| ||||| || | ||||| || ||||| || || || || || |||||
Sbjct 136773 AGCGGCAAAGAGTTTTTGCGTGAAACTTGGACCCGTTTCGTCGAGGACAGTTTTCCCATT 136832
Query 337 ACCACCGATCAAGAAATTATGGATCTGTGGTTCGAACTCCAGGTACGTCCCATGCATCCT 396
|| ||| || || | ||||| ||| ||| || | | | |||| | ||
Sbjct 136833 GTCAACGACCAGGAGGTGATGGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCCC 136892
Query 397 AACCGTTGCTACAAATTCACTATG---CAATACGCTCTCGGCGCCCACCCCGATTACGTG 453
|||||||| ||||| || | || ||| |||| ||| | || |||| ||||||
Sbjct 136893 AACCGTTGTTACAAGTT---TTTGGCTCAACACGCGCTCCGTTGGGACGCCGAGTACGTG 136949
Query 454 GCTCATGATGTGATTCGTCAGCAA-GATCCCTACTACATTGGTCCCAACAATGTCGAGCG 512
| || || |||||||| || | || ||| ||| | || | ||||||| | |
Sbjct 136950 CCGCACGAAGTGATTCG-CATCGTCGAACCCATGTACGTGGGCCAGAACAATGAGTACAG 137008
Query 513 CATCTGTCTATCCAAACAGGGTGTTGCTTTCCCGCTCACTTGCCTTCAATCCGTGTACAA 572
||| || | | |||| || | | || ||| ||| | | || || |||||
Sbjct 137009 AATCAGTTTGGCGAAACGCGGCGGCGGTTGCCCCATCATGAACATACACAGCGAGTACAC 137068
Query 573 TGACAACTTTGAAACGTTCTTTGACGACGTCCTGTGGCCATACTTCTACCGTCCTCTGGT 632
|| |||||| ||||| | || |||| | ||| |||| ||| || | ||
Sbjct 137069 CAACTCGTTTGAATCGTTCGTCAACCGCGTCATCTGGGAGAACTTTTACAAGCCCATCGT 137128
Query 633 CTACGTGGGCACCACATCGTCCGAAATCGAAGAAATCATGATCGAGGTTTCGCTGTTGTT 692
||| | |||||| || ||||| || ||||| | ||||| || ||||| ||||
Sbjct 137129 GTACATTGGCACCGACTCTGCCGAAGAGGAGGAAATTCTCATCGAAGTGTCGCTCGTGTT 137188
Query 693 CAAAATCAAGGAATTCGCGCCCGACGTGCCTCTGTTCACCGGACCCGCTTATTAAA 748
|||| | || || || || || |||| ||||||||||||||| ||||| |||||||
Sbjct 137189 CAAAGTTAAAGAGTTTGCACCTGACGCGCCTCTGTTCACCGGTCCCGCATATTAAA 137244
Score = 100 bits (110), Expect = 2e-16
Identities = 82/100 (82%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 52375 TGTGGGAACGTAGCTACGAGGACAATTACACGTTGGGTCAACAATTGAGTATACGTATGA 52434
||||||| || |||||||||||||||||||| | || ||||| ||||| || || || |
Sbjct 101857 TGTGGGAGCGAGGCTACGAGGACAATTACACGCTCGGCCAACAGTTGAGCATTCGCATCA 101916
Query 52435 CTACAAATTTGATACAGAGTGGATTAGATTTTAAACATCA 52474
| || || |||||||||| || || ||||||||||||||
Sbjct 101917 CCACCAAACTGATACAGAGCGGGTTGGATTTTAAACATCA 101956
Score = 95.1 bits (104), Expect = 9e-15
Identities = 250/384 (65%), Gaps = 21/384 (5%)
Strand=Plus/Minus
Query 109451 CAATGCAACCCTTCAGCCAATCTGTTGCCCATGAAGCTTTGGTTTATACTCCATTGATCC 109510
|| ||||| | ||| |||| | ||||||| || || || | |||| || ||
Sbjct 99205 CATTGCAAACTTTCCGCCATGCGATTGCCCACAAACGACTGATTCTTGGTCCACTGGTCG 99146
Query 109511 AAACGAGTACCCTCCACTTTTTCGTATCCGGTAATATTTTTACCTATAAATTCTTTGTAG 109570
||||| || |||||||||||||||| || || || | || || |||||| |
Sbjct 99145 AAACGCGTGCCCTCCACTTTTTCGTGGCCCGTGTGGTTGCTCTTGATGAACTCTTTGAAT 99086
Query 109571 ATATTGTCTGGAGTGTTGTTGAAAAACATGTACGGTATTAATATTAGAGGATATCTTTTA 109630
|| ||||| ||||||||||| || |||||||||||||| | || ||||| |
Sbjct 99085 ATGTTGTCGGGAGTGTTGTTAAACAACATGTACGGTATGTTAAATATGGGATAGCGCGGC 99026
Query 109631 CCGTT-TTTTGTGCAAGTTTT--------CACCA------------CCATCCCATCAAAA 109669
|||| | |||| ||| ||||| | || | |||||
Sbjct 99025 GCGTTCGGGTCGGCAAAATTTCCACCGCGCACCACGTACTTGCGCTCAATGTCGTCAAAG 98966
Query 109670 TTTGTTTGGCGCGACAAATATGATATTGGTGAGAGACAAATTTGGGCATGCACTCCGTCT 109729
|| | |||||||||| | | || | || || || || ||||| || ||| ||||||
Sbjct 98965 TTGGACTGGCGCGACAGAAACGAGACGGGCGACAGGCAGATTTGTGCGTGCGTGCCGTCT 98906
Query 109730 TTGGTTACGTATTCACTCAAATCTTCGGCGCTGTTCAACACCCCCTTTTGTCCGTGCACA 109789
| | | | || ||| ||||||| |||| |||||||||||||| ||||| |
Sbjct 98905 TCCGCCATCCACTCGGTCAGATCTTCGCTCTTGTTGAACACCCCCTTTTGGCCGTGGATG 98846
Query 109790 CCGCAAATTTTCAATCCCTCCAAA 109813
||||||||||| | ||||| |||
Sbjct 98845 CCGCAAATTTTGACGCCCTCTAAA 98822
>seq1641
Length=3631
Score = 93.3 bits (102), Expect = 3e-14
Identities = 162/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 42875 AATCGTCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGT 42934
||| || ||||| || |||| | ||| | ||| | ||| |||||||| | ||||
Sbjct 2392 AATAGTTACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGT 2333
Query 42935 AATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGAT 42994
| || |||||||||||| | || || | |||||| || ||||| ||||| || || || |
Sbjct 2332 AGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGT 2273
Query 42995 CGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAG 43054
| | || | |||||| || || ||| |||| || | | | || || |
Sbjct 2272 CTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGG 2213
Query 43055 CCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
||||||| || | || || ||||| || || || || || || ||||||||||||
Sbjct 2212 CCTCGACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 2157
>seq16183
Length=3749
Score = 89.7 bits (98), Expect = 4e-13
Identities = 122/168 (73%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
||||| || | || |||| |||||| || || ||||||| || |||||||| | ||
Sbjct 1 AATGTGCGCCCATCTTCCAGTTGTTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGGGGA 60
Query 43003 ACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| |||||||| || |||| || | || || | | | |||||| ||| || ||
Sbjct 61 ATGCCTTCTTTGTC-CTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCAC 119
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| || |||||||| || || || ||||||||||||||||||||
Sbjct 120 TTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 167
>seq32113
Length=13445
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | || ||||| || | ||| || ||||| | ||| || || ||
Sbjct 7564 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 7623
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || ||| |||| |||||||| || || || |||||||| || |||||||| | ||
Sbjct 7624 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 7683
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || || |||| || | ||| || ||| || || ||
Sbjct 7684 ATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACT 7743
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || || ||||| || || || ||||||||||| || ||||||||
Sbjct 7744 TCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380625538852872
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