Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_004066.1 Length=36798 Score E Sequences producing significant alignments: (Bits) Value seq7607 787 0.0 seq14859 163 7e-36 seq1539 143 6e-30 seq3145 98.7 2e-16 seq640 86.0 1e-12 seq52331 82.4 2e-11 >seq7607 Length=81728 Score = 787 bits (872), Expect = 0.0 Identities = 1016/1401 (73%), Gaps = 6/1401 (0%) Strand=Plus/Minus Query 17408 CAATCCTTTTG-TAGACTTATCAACAGAAGAGCTTAGAAAGTTGGCGAGTCGTGATGGAT 17466 |||||| |||| || ||| | | |||||| | | |||||||||||||||||||||| Sbjct 69746 CAATCCATTTGCTAATCTTTCCGA-AGAAGAATTGCGGAAGTTGGCGAGTCGTGATGGAT 69688 Query 17467 AAAATAGCGCTAGGGGCAAAAATTGAACTGTCTAAGCGCTTTTTCTTTGATTACTGTAAT 17526 ||||| || |||| || ||| |||| | | || || | ||| |||||||| || | Sbjct 69687 AAAATTGCTTTAGGCGCCAAACTTGAGTTAGCAAAACGATATTTTTTTGATTATTGCCAC 69628 Query 17527 CTCATCATGCCAAGCTTTTATAAACGAGATAGAGCTTATCTGGTGACAATGTGCGAAGAG 17586 | || |||||| |||||||| | ||| |||| ||| || || | || || | |||| Sbjct 69627 TTGATTATGCCATCGTTTTATAAGCCAGACAGAGATTACCTTGTTTCTATATGTGGAGAG 69568 Query 17587 TTTCAGTCGTTTCTAAATGATGATGAGCATGATGTTTTGGTTTTGAATCTTCCACCACGT 17646 |||||||| || || ||||| |||| || ||||| | || | ||| | || || | Sbjct 69567 TTTCAGTCATTCCTTAATGACAATGAACACGATGTGCTTGTGCTTAATATGCCGCCTAGA 69508 Query 17647 CACGGGAAGTCGCTCACGCTCGGTAAGTTTGTAGAGTGGGTGCTTGGTAATGACCACACG 17706 || || ||||| | || || || |||||| || ||| | | || ||||| || | Sbjct 69507 CATGGTAAGTCCTTAACACTTGGACGGTTTGTCGAATGGATATTAGGGAATGATCATAGC 69448 Query 17707 AAGAAAATCATGACTGGTTCATATAACGAAATTCTATCAACAGTTTTCTCTAAAAATGTT 17766 |||||||| |||||||| ||||||||||| | ||||| || || || || || ||||| Sbjct 69447 AAGAAAATTATGACTGGATCATATAACGAGACACTATCGACCGTATTTTCCAAGAATGTG 69388 Query 17767 CGTAACACTATTCAACAAAATAAAGCGGATGTGGATAAGATTGTTTACTCCGATATTTTT 17826 | ||||| || ||| || ||||| ||| |||| ||| || ||||||||||||||| Sbjct 69387 AGAAACACAATCCAAGAAGTAAAAGCCGATAAAGATATGATAGTCTACTCCGATATTTTT 69328 Query 17827 GATTCCAAGATTAAAGACGGAGATGCTGCGAAAAACCTTTGGAGTTTGTCAGACGGATAT 17886 ||| | ||||| ||| | || |||| || | || |||||||||||| ||| || ||| Sbjct 69327 GATGCGAAGATAAAATATGGTGATGGAGCTATGAATCTTTGGAGTTTGGAAGATGGCTAT 69268 Query 17887 AACAACTATCTAGCAACCTCTCCAACAGGGACTGCAACAGGTTTCGGTGCTGACATTNNN 17946 || ||||| || || || || ||||| || || || || ||||| ||||| ||||| Sbjct 69267 AATAACTACCTGGCCACATCGCCAACTGGTACAGCTACTGGTTTTGGTGCAGACATAATT 69208 Query 17947 NNNNNNNNNNNNNNNNTCAAGAATGCTGAGGAAGCTAACAACGCGACAGTATTAGAAAAA 18006 ||||||| || || ||||| |||||||| |||| || || ||| Sbjct 69207 ATCATTGATGACGTAATCAAGAACGCAGATGAAGCAAACAACGCTGCAGTTTTGGATAAA 69148 Query 18007 CATTGGGACTGGTTTGTAAACACTATGCTTTCACGTTTGGA-ATCAGGCGGTAAAATCAT 18065 |||||||| ||||||||||| |||||||| || ||| | || | || |||||| ||||| Sbjct 69147 CATTGGGAATGGTTTGTAAATACTATGCTATCCCGTCTTGAGAGCAA-CGGTAAGATCAT 69089 Query 18066 AATTAACATGACTCGTTGGCATAGTGAAGATTTAGCCGGACGTGCTTTGCGTGAATTGCC 18125 || ||||||||| | |||||||| | ||||| || || | || || |||||||| Sbjct 69088 TATCAACATGACTAGATGGCATAGCAATGATTTGGCAGGTAGAGCGTTAAAGGAATTGCC 69029 Query 18126 TAAGAATGGCTATCGAGTAAAACATATTAA-TTTCAAGGCTTTCAATGAACAAACGAATG 18184 | || ||| || || |||||||| ||||||| | | | || |||||| | Sbjct 69028 ACTTAGCGGGTATAAGGTTAAGCATATTAACTTTCAAGCGTATGATGAAAAAAACGATCG 68969 Query 18185 AAATGCTTTGTGATGATGTCCTGACACTCGAAGATTATAAGCGCAAAGTAAAAACAATGG 18244 | ||||||| || ||||| || | || ||||| ||| |||| ||||| |||| Sbjct 68968 GA-TGCTTTGCGAAGATGTTCTTTCTTATGAGGATTACCTGCGTAAAGCTAAAACGATGG 68910 Query 18245 GGGCTGATATTGCCAGCGCCAACTACCAACAAGAACCGATTGATGTCAAAGGTCGATTAT 18304 | || || || || |||||||||||||||||||| || || || | ||||| |||| | Sbjct 68909 GTGCGGACATCGCTAGCGCCAACTACCAACAAGAGCCTATCGACATTAAAGGGAGATTGT 68850 Query 18305 ATAGTGAGTTCCAAACCTACAACGCTCGCTCAGAGTACAAAAAGATTTGGAACTATTGCG 18364 | |||||||| | || || | | | | || | || || ||||||||| | ||||||| Sbjct 68849 ACGGTGAGTTCAAGACTTATAGCAATAGATCCGCCTATAAGAAGATTTGGCATTATTGCG 68790 Query 18365 ATACCGCAGACACTGGGAAAGACTATCTCTGTTCGATTGTGTGGGGTGAAACCTCAGACG 18424 |||| || || ||||| || ||||| || |||||||| || ||||| ||||| ||| | Sbjct 68789 ATACTGCCGATACTGGTAAGGACTACCTTTGTTCGATCGTTTGGGGAGAAACGCTAGATG 68730 Query 18425 GCTTTGCGGATGTGTTGGATATTATTTACACTCAAAAACCGATGGAATACACAGAAAACG 18484 ||| | ||| || || || | || || |||||| | || |||||||||||||| | | Sbjct 68729 GCTATCAGGACGTTTTAGACGTCATCTATACTCAACAGCCAATGGAATACACAGAGAGTG 68670 Query 18485 CAGTGGCCAATCAATTAATTAATAACAGAGTAAATGCATCAAGAATCGAGCGTAACAATG 18544 |||| || ||||| || ||||| || ||| ||| |||| | |||||||| ||||| | Sbjct 68669 CAGTTGCAAATCAGTTGATTAACTTCAAAGTGAATACATCGCGTATCGAGCGCAACAACG 68610 Query 18545 GCGGTCGGTCTTTTGCTCGTTCTGTCAGAGATAAGATTCAAGGCAAAGTGGCTTGTGCTG 18604 ||||||||||||||||||||||||| ||||| || | |||| ||| || || | Sbjct 68609 GCGGTCGGTCTTTTGCTCGTTCTGTAAGAGAGAAAGTAAAAGGAAAATGTGCAACTGTTA 68550 Query 18605 TAGAAGATTTCTTCCAAGGAAATAATAAAGAAGCCCGAATTTATTCTAATAGTTACTGGA 18664 | || ||||| ||| | | ||||||||||| |||| ||||| |||||| |||||| Sbjct 68549 TTTCCGACTTCTTTCAAAGCACCAATAAAGAAGCGAGAATCTATTCCAATAGTCACTGGA 68490 Query 18665 TAGAGCAGCATGTTCGATTGCCGAATGACTGGCGAACTCGTTTCCCAGAATACTATCAAG 18724 | || || |||| ||| |||| | ||||||| |||| | || || || |||||| | | Sbjct 68489 TTGAACAATATGTACGAATGCCTAGTGACTGGAGAACAAGATTTCCTGATTACTATAAGG 68430 Query 18725 CAATGACAACTTATCAACGTGAAGGTAAAAATAAACATGATGATGCGCCGGATGCAACAA 18784 | ||||| |||||||| ||||| || || |||||||||||||| || |||||||||| Sbjct 68429 CGATGACTACTTATCAGAAAGAAGGAAAGAACAAACATGATGATGCTCCAGATGCAACAA 68370 Query 18785 CAGGGATTGCTGAGACAATGA 18805 |||| || || || ||||||| Sbjct 68369 CAGGCATCGCCGAAACAATGA 68349 Score = 437 bits (484), Expect = 2e-118 Identities = 667/947 (70%), Gaps = 11/947 (1%) Strand=Plus/Minus Query 31171 GGCGGTGGTTGGAATGGCCAATATCCACCAGAAGTCACAAGCGATCGTGATAAACGGTAC 31230 |||||| |||||||||| || || ||||||||| | || |||||||||||||| || Sbjct 53237 GGCGGTAGTTGGAATGGTCAGTACCCACCAGAAATTACTTCGGATCGTGATAAACGCTAT 53178 Query 31231 TGGCAAATCTGGGCAATGGCAATTGGGGCTGGTTTCTCTAAACAAGCGGCGGCCGCATTA 31290 |||||||| ||||||||||||||||| || || ||| | ||||||| || ||||| | Sbjct 53177 TGGCAAATTTGGGCAATGGCAATTGGCGCAGGATTCACACAACAAGCCGCTGCCGCTCTT 53118 Query 31291 CTCGGAAATGCACAGGGTGAATCTGATGCCAATCCAACGGCTGATGAGGGCGGCGGACGT 31350 | ||||| || || || ||||||||||| ||||| || || ||||| || || Sbjct 53117 TTAGGAAACGCTCAAGGAGAATCTGATGCAAATCCTACTGCCGATGAAGGAAATGGTAAA 53058 Query 31351 CCTGGATTCGGTTATGGGGTTTGGCAATGGACGGATAGTTCAGGCGCTAGCTCTGGACGT 31410 || |||||||||||||| || ||||| ||||| |||||| |||| || || ||| ||| Sbjct 53057 CCAGGATTCGGTTATGGCGTATGGCAGTGGACAGATAGTACAGGGGCGAGTAGTGGTCGT 52998 Query 31411 GTTTATATGATTAACCTCATGACACGAGCAGGAGTGACTGACAATCCTGACACAATCACA 31470 || |||||||| || | ||||| | ||| ||| | ||||| |||||||| || |||||| Sbjct 52997 GTATATATGATCAATTTAATGACTCAAGCCGGAATCACTGAAAATCCTGATACTATCACA 52938 Query 31471 GCCCAATTCAAACTCTTGATGTGGCATGCACAAAACGGCCAATGGATTGCGAAAAGTTCT 31530 || || || || | || ||||||||||| | ||||| ||||||||||| | | | Sbjct 52937 GCGCAGTTTCAATTGTTAATGTGGCATGCTCCGAACGGTCAATGGATTGCAACCAACGCC 52878 Query 31531 TATCCTTATTCTTGGACTCAATTCATGACATTGACCAATATCAATACTGCAACGCAAGCT 31590 || |||||| | ||||| ||||| ||| | || ||||| ||| ||||| ||| Sbjct 52877 TACCCTTATACATGGACACAATTTATGGGCCTCACAGATATCGCTACCGCAACAAGAGCG 52818 Query 31591 TTTGTAGCTAACTTTGAACGTCCTTTAAACGGACACCCTGAACGTAGCACTTGGGCACAA 31650 || | | ||||||||||| || ||||| | ||||||||| | | ||| || Sbjct 52817 TTCGAAAAGAACTTTGAACGACCGTTAAATGATCACCCTGAAAGAGTCGGCTGGTCAACT 52758 Query 31651 GAGTGGTATAACAAATTT----GTTAATCTTAAAATCCCAAGCGGTGGCGGAGGTTATAT 31706 | ||||| ||| ||| || |||| ||||| || | | || ||||| Sbjct 52757 AATTGGTACAACCGGTTTAAAGATTTATCT----ATCCC--GCAAT-CAGCTGGATATAT 52705 Query 31707 CGCTCCAATTTCAAGTCCTATTACCGTAACAAGTGAAATGGGTTGGAGAACGAGTCCAAT 31766 | |||||| || || || || |||||| | |||||| | || || || || Sbjct 52704 TACGCCAATTAGCGCACCAGTTCGAGTGACTAGTGAATTTGGTTGGCGTACAAGCCCTAT 52645 Query 31767 CACCGGAGCGCAAGAATTTCACAATGCTATGGACTTGGTTAATGGCAATCCAACAACTCC 31826 |||||| || |||||||| || |||| || || |||| ||| |||||||| || || Sbjct 52644 CACCGGTGCTCAAGAATTCCATAATGGAATTGATCTGGTGAATAACAATCCAAATACGCC 52585 Query 31827 AATCTTAGCTTCTAACGATGGTCAAGTGGTCCAAGCAGGAAGTAATTATTATGACTGGTA 31886 ||||| ||||| | || || | | | |||||| | |||| | ||||| Sbjct 52584 TATCTTTGCTTCAAGTGAGGGAGAGATCATTGTTGCAGGAGCAGAATATTTTAGTTGGTA 52525 Query 31887 TGGAAATTACACGGTCATCAAGCATGCGGATGGACTTTATACAGGGTACGCACATCAAAG 31946 || ||||| ||||||| ||| | ||||| |||| || || ||||| ||| ||| Sbjct 52524 CGGTAATTATGTAGTCATCAGGCACTCAGATGGTATTTACACGGGTTACGCTCATTTAAG 52465 Query 31947 CAGAATCGATGTTTCTGTGGGTCAAAATGTTAAAAAGGGCCAACAAATTGGACTTATGGG 32006 || | |||||||||||||| ||||| ||| | | || |||||| | || | ||||| Sbjct 52464 TAGGGTAGATGTTTCTGTGGGACAAAAGGTTTCACAAGGACAACAATTAGGGTTGATGGG 52405 Query 32007 AGCGACTGGTCCGGTCACTGGACCACATTTGCACTTCCAATTTATGGACCAATATTGGCC 32066 | | ||||||||| || ||| |||| | || || ||||||||||| ||| || || Sbjct 52404 AACAACTGGTCCGTCTACAGGAGAACATCTTCATTTTCAATTTATGGATGAATTTTATCC 52345 Query 32067 ATCATCAAGCGCTCACTTTAAGAATCCAAGGGATTATATCAAATTTT 32113 ||||||| ||||| || | ||||| | ||||||| | |||| Sbjct 52344 CTCATCAAACGCTCGATTCCATAATCCGCGTAATTATATTGATTTTT 52298 Score = 343 bits (380), Expect = 3e-90 Identities = 857/1298 (66%), Gaps = 75/1298 (6%) Strand=Plus/Minus Query 25635 TTTATTTTTTA-AGGAGAAATCAAAATGGAATTAACAATTAATGGCAAACAGTATGTTTT 25693 ||||||||| |||| ||| |||||||||||| ||||| | |||| ||||| || Sbjct 59598 TTTATTTTTAGGAGGATGAAT--AAATGGAATTAATGATTAACGACAAAGAGTATAGCTT 59541 Query 25694 TATCTTTGGTTACCGATTCATTAAGGAATTGAATaaaaaaaaTGAAGTCACAGAGCGTGG 25753 ||| ||||| | | || || ||| |||| | | || || ||| | || Sbjct 59540 TATTTTTGGATTTGGGTTTATCCGTGAAATGAACCGCAGATATTCCGTTGTAGAACAAGG 59481 Query 25754 GATGACTTTAAAAGCCGGCTTAGAT--AACGCTTTGATGAACTTCTTTAGCGGAGATATC 25811 ||||| | ||| ||||| ||| ||| || |||| ||||||| || ||| || Sbjct 59480 AATGACAATGAAACTGGGCTTGGATTCAACACTCG--TGAATTTCTTTAACGAAGAAATT 59423 Query 25812 GAAACACTTGTTGAAATGCTAAAAACTGCGAATGCAACAGAAAATCCTCGTGTCTCTGAG 25871 |||||| | |||||||| ||||| || || |||||||| || || || |||| Sbjct 59422 GAAACATTGATTGAAATGTTAAAAGTAGCAAACGCAACAGAGTCACCACGAGTTGCTGAA 59363 Query 25872 AAAGGGATAGTTGAATGGATTGAAGAAAATGGTATTGATATGCTTTTTGATTTAGTACTC 25931 |||| | ||| | | |||| |||| ||| |||| || ||| |||| ||| | Sbjct 59362 AAAGATTTGATTGCCTTGGTTGATGAAATTGGCTCGGATAAACTCTTTAATTTGGTATTG 59303 Query 25932 GAAGAGTTAAAAAAGTCGGAATTTACCAAGaaaaaaaCATTGAACTTCGAGAAAGAAGTC 25991 ||||| |||||||||||||||||||| |||||||||||| | || |||| || || || Sbjct 59302 GAAGAATTAAAAAAGTCGGAATTTACAAAGAAAAAAACACTAAAGATCGAAAACAAAATC 59243 Query 25992 AGCAAAAATCTACAGTAATAGATTTTGACA-AACTCTATGAACAAGTTCAGATAAATTGT 26050 | || | | || | ||||||| ||| |||| || || ||||||||| Sbjct 59242 AAAAACAGCAAATAGAAGAAGATTTTTACACAACT----------GTCCAAATAAATTGT 59193 Query 26051 TTGCGTTATCTCGGAATTGCTAATCTAAGAGATATAGAGCGCATGACCATTTCGGAGTAT 26110 |||||||||| || ||| || | | |||||| || || ||||| || ||| ||| Sbjct 59192 CTGCGTTATCTAGGGATTTCTGACTTTCTAGATATCGACCGAATGACAATGCTGGAATAT 59133 Query 26111 GAATTAAGGCTGAAAGCTTATAGGCTAAAAAGACTTGATGAGCAAGAATTTAT---TTAC 26167 ||| |||| | | || ||| | || || || | ||||| ||||| |||| |||| Sbjct 59132 GAAACAAGGATTATTGCCTATCGTCTTAAGAGGTTAGATGAACAAGAGCTTATACATTAC 59073 Query 26168 CAACAGGCATGGGCAAATTGGCAAGTTCAATCAACTAAGCAACAAGGTAAGAAGCAAGTT 26227 ||| |||||||| ||| ||||||| || | ||||| ||| ||||| | | ||| Sbjct 59072 CAA---GCATGGGCGAATAGGCAAGTCAAAGCTACTAAAAAACGTGGTAAATACGAGGTT 59016 Query 26228 CCAGTTTATTCG--ACCTTCAAGAAGTTTTTTGATAAAGAAAAATTTGAAAATGATATTT 26285 || |||||| | |||||| | || || ||| | ||||||||| ||||||| | || | Sbjct 59015 CC--TTTATTTGATACCTTCGAAAAATTCTTTAACAAAGAAAAACTTGAAAACAAAATCT 58958 Query 26286 TAGGAATCGAAACTTCGGACAGTGCTTTtaaaaaggacaaaaaactaattaacctcatga 26345 | || | || | ||||| || | | | ||| ||| || Sbjct 58957 TGGGCAAGGA-----------------TGAAAAAATACCTAGA--TTTGTAAACTCCTG- 58918 Query 26346 aaaaagcaaataagtaagaaaggaggaaaaaCATGGAATCTTATAGTGTAGAAGCGATTC 26405 | ||||||||||||| |||||||| || || | ||||| ||| Sbjct 58917 ---------------AGGAAAGGAGGAAAACTATGGAATCATACAGCCTCGAAGCAATTT 58873 Query 26406 TGAGTGCTGTTGATAAAAATTTCACTTCAACCATGAATAAAGCAGATAGTTCAATGGGAA 26465 || ||||| |||||||||||||| || || ||||| | ||||| | |||||||| Sbjct 58872 TGTCCGCTGTCGATAAAAATTTCACATCTACAATGAAGGACGCAGACAACTCAATGGGCG 58813 Query 26466 CATTGAACAAGAACTCACAAAATACAAATACTTCTATCCTAGATATTGCTAAGGGTGTTG 26525 | ||| | || | | || ||||| ||||||||||| || || || || ||||| | Sbjct 58812 GCCTTAACGATAATACTAAGAAAACAAACACTTCTATCCTCGACATCGCAAAAGGTGTCG 58753 Query 26526 GGGTTTTTAAACTTGTTGATTCTGCGATTAGTGTGGTAAAAAGTTCATTGGATGGTGCAA 26585 |||||||||| | |||||||| || ||| |||| || | || ||||| | || || | Sbjct 58752 GGGTTTTTAAGTTGGTTGATTCGGCTATTGGTGTTGTTACAAACTCATTAGGCGGAGCCA 58693 Query 26586 TTAACCGTTTTGATACTTTAAAAAACTATCCAAAAGTAATGGCTCAAATGGGCTATTCTA 26645 || | ||||| ||||| || ||| | || ||||| ||||| ||| |||| ||||| | Sbjct 58692 TTGATCGTTTCGATACATTGAAACAGTACCCAAACATAATGCGGCAACTGGGATATTCAA 58633 Query 26646 CTGATGATGTTGCTAAGTCAACCGAGGTACTaaaaaaaGGTGTCGACGGATTGCCTACTT 26705 |||| || || | | |||| | ||| |||| ||||||| ||||| ||| Sbjct 58632 CTGACGAAGTAGACCAATCAATGACTAAATTAACTGAAGGAATCGACGGTTTGCCAACTA 58573 Query 26706 CACTTCAAGAACTGACGAAAAGCTCTCAAAGCTTTGCGAT----TTTAGAGAAAAGCGCA 26761 | | | || | |||| | ||||| || |||| | |||| || Sbjct 58572 CGTTAGACGATATTGTAAAAAATGCACAAAGTTTAACGATGACCACTGGAGATTTAGACA 58513 Query 26762 ACGGGTGGTGCTAAAACAGCAACCGCTCTTAACGATGCTTTTCTATCTTCTGGCGCAAGT 26821 | ||| | || |||||| |||| | ||| |||| || | | ||| |||||| Sbjct 58512 AAGGG----ACAGAATCAGCAATCGCTTTAAACAATGCGTTCTTGGCCAGTGGTGCAAGT 58457 Query 26822 GCTGCAGATGCAAGCCGAGGAGTTCAGCAATATAGTCAAATGTTATCTAGTGGTAAAGTT 26881 |||||||||||||| |||| | ||||||| || ||||| ||| || || ||| Sbjct 58456 TCTGCAGATGCAAGCAGAGGGCTAACTCAATATACCCAGATGTTGGCTAAGGGCAAGGTT 58397 Query 26882 GATTTAATGTCATGGCGAACACTTCAA--GAAACTATG 26917 || | ||||| |||| ||| || || |||||| Sbjct 58396 GACATGCAATCATG--GAACTCTTTAACCGATACTATG 58361 Score = 185 bits (204), Expect = 2e-42 Identities = 594/911 (65%), Gaps = 22/911 (2%) Strand=Plus/Minus Query 20227 GACTATTGGATAAAACGTGAGCAAGCGTGGCAGGCGCAACAAATAAAAGATGATACAAAA 20286 ||||| | || ||||||||| |||| ||||| |||||| || |||||||||| ||| Sbjct 66012 GACTACTTCATCAAACGTGAGAAAGCTTGGCAACAGCAACAGATTAAAGATGATAAGAAA 65953 Query 20287 CGCATGAAGCAAATCATGGATAAGCTATTTGAA---GCTCAAGAAGCCATTCAAAAAGAA 20343 |||||||| | |||| || ||| | || || ||||| || || || ||||| Sbjct 65952 CGCATGAACGAGATCA---ATCAGCGTCTGCAATATGCACAAGATGCGATACAGAAAGAG 65896 Query 20344 ATCAATGCCAACTGGCAGAACTTTGCGAATGGTCAAGGTATTTCTATTAGTGAAGCCATG 20403 || | || | ||| | | ||| | ||||| || || || ||| ||||| ||| Sbjct 65895 ATAGACGCACAGTGGGACAGTTTTTCCAATGGACAGAAAATCACTCGTAGCGAAGCGATG 65836 Query 20404 AAACGTGCGGATAAAATGGATGTCAAAGCATTTGCCAATAAAGCTAAGAAGTACGTTCAA 20463 || || || | |||||||||| ||||||||||| || ||||||||||| ||| || Sbjct 65835 AAGCGAGCTAACGAAATGGATGTAAAAGCATTTGCTCGCAAGGCTAAGAAGTATGTTAAA 65776 Query 20464 GAAAAAGACTTTTCACATCAAGCAAATCAAGTATTGAAACTTTATAACTTGACCATGAGA 20523 ||||||||||| || | |||||| | | ||| || || || || | || ||| | Sbjct 65775 GAAAAAGACTTCTCTCCGACAGCAAACAAGGAATTAAAGCTATACAATCTTACGATGCGT 65716 Query 20524 GTGAATCGTTTAGAACTTCTGAAAGCAAATATTGGTCTGGAGCTTATTTCTGTATTTGAC 20583 || ||||| || ||| | || || || ||||| || || || || ||| || | || || Sbjct 65715 GTTAATCGATTGGAATTACTAAAGGCGAATATCGGACTTGAACTGATTGCTATGTTCAAC 65656 Query 20584 GACTTGGATAAATATTTTTCA-AAGAGTTT--GAGCGACGCAGCTCTCACAGAATTTGAA 20640 || ||||||| ||||| ||| |||| || |||| | ||| | | |||||| || Sbjct 65655 GATATGGATAAGTATTTCTCAGGAGAGCTTACTAGCGCTG--GCT-TGAAAGAATTGCAA 65599 Query 20641 AGACAAGCCGGAATTCTTGGTCTAAGTG----TTCCAAAGAAAGGATATAACAGTTTAGT 20696 | ||||| || | |||| | || || | | || | || ||| || |||| Sbjct 65598 CGTCAAGCAGGCA-TCTTAG---AAATGACGATCGCTAAAAGTGGTTATGCCAAGCTAGT 65543 Query 20697 TGAATCAGTTCTTAATGGAAGTTATAAAGTCGAAGGATTCGCCA-GTTTCTCTGACAAGC 20755 || ||| | ||| | | | || || || ||||| | |||| | || || Sbjct 65542 GGAGCAAGTAATCAATAGTTCGTTTCGAGCGGATGGTTTCGCAACGTTTAGC-GAACGGC 65484 Query 20756 TTTGGCAATATCAATTTGAATTAAAAGCTGATATTGAAAAACTTCTTATTCGTTCAGTAA 20815 ||||| || ||| || || ||||||||| | || || | || | ||| || | Sbjct 65483 TTTGGATGTACCAAGCAGAGTTGAAAGCTGATCTGGATAAGTTGCTGGTACGTAGTGTGA 65424 Query 20816 CTGGCGGAATCAATCCAAAAGCATTGGCCCCACAACTTAAAAGGCTGATGACTGAACAAG 20875 || ||| ||||| ||| ||| | | || | | |||| | | || ||| ||| Sbjct 65423 CTTTAGGACGTAATCCCAAACAGTTGTCATCTGAATTAAGAAGGTTCCTTACCGAAAAAG 65364 Query 20876 GAAAGCTTAATGCGACTTACAACGCACAACGATTGCTTGTGTCAGAAACAACGAGAATTC 20935 | | ||| | || ||| | | || ||| | || ||||||| || || ||| Sbjct 65363 GCAGAGAGAATACTCGTTTCAATACGGAGCGGTTGATGGTCACAGAAACGACTAGGGTTC 65304 Query 20936 AAACGGCTATTCAAGAAGAAAGCTATAAAAAAGCTGATATTGATAGTTATGAGTATATTG 20995 | | | ||| ||||| ||||||| | ||||||||| | ||| | ||| Sbjct 65303 AGATTGGTATCCAAGAGCGAAGCTATCGGGATGCTGATATTACGAAGTATACATTCATTT 65244 Query 20996 CTGAACCGTCAGCTTGTCCTATCTGTGGGGCATTGAATGGTAAAATTTTCAAGCTTAAAG 21055 |||| || || || || | | | ||| | |||||||||| ||| | || | || | Sbjct 65243 CTGAGCCTTCCGCATGCCGTTTATGTTTGCCATTGAATGGGAAAGTGTTTGATGTTGATA 65184 Query 21056 ATATGTCGCCTGGTATTAATGCGCCAAACATGCATCCGTTTTGTAGATGCAGCACAGCGC 21115 | ||| || || | ||||| | |||||||| |||||||||||||| ||||| | Sbjct 65183 AAATGGAACCAGGAACAAATGCTGCTCCGATGCATCCATTTTGTAGATGCAGTACAGCAC 65124 Query 21116 CGCATGTTGAT 21126 | | |||||| Sbjct 65123 CTTACGTTGAT 65113 Score = 163 bits (180), Expect = 7e-36 Identities = 424/640 (66%), Gaps = 10/640 (2%) Strand=Plus/Minus Query 30013 GGTGAAGAAGTTGGCGACGGCTATGGGCGAAGAATTGAGTTTTCAGACGTCGAGTGGAGA 30072 ||||||||||| ||||| || ||||| |||||||| || ||| | ||| | || |||| | Sbjct 54458 GGTGAAGAAGTCGGCGATGGTTATGGTCGAAGAATCGAATTTGCGGACATAGAATGGAAA 54399 Query 30073 AAGTCAAATGGTAAACCACTTGATAAGCCAAAAGGTCAAAACTGGATTGAATATCCAGAA 30132 || |||||||| ||| | || || || ||| |||| ||| ||||| |||| ||| Sbjct 54398 AAATCAAATGGCGCACCTTTAGACAAACCGTTAGGAGAAAATTGGCTTGAAGATCCGGAA 54339 Query 30133 ATGACAAAAGAATACGGCATTCC---ATCAAACGGAAAAATGTTACCACGTAAAATGGTT 30189 ||| | ||| || ||||| | | || |||| |||| ||| ||| ||| Sbjct 54338 GCAACAGCAAAATTTGGTATTCCGCAACCTAATGGAACAATGAGGAAACGAGAAACAGTT 54279 Query 30190 GTTATTTTTGACGATGTGGAAGATGCAAGTGAACTTTTGCAAAAGACTTATGACCAACTG 30249 || ||||| || ||| | |||||| ||| || || || ||||| |||||||| | || Sbjct 54278 GTGATTTTCGATGATATTGAAGATCCAACAGAGCTATTACAAAAAACTTATGAGACATTG 54219 Query 30250 GCTTATTACTGCC-GGCCACTCGTTCAGTTTAGTACTGAGATATTAGGCAGTGATTCAAT 30308 | | | || || | || | | ||||||| ||||| | ||| |||||| || Sbjct 54218 G-TGGGTGCTTCCAGACCTTTAGCACAGTTTAAAGCTGAGGTGACAGGGAGTGATGTCAT 54160 Query 30309 TGGAAATACTGTTTCAATCCATAGAGGAGACCGAAATTATCACTATCAGACAAGAGTCTT 30368 ||||||||| || |||| |||||| || || ||||||||||||| || ||| |||| Sbjct 54159 TGGAAATACAGTGACAATTCATAGACATGATCGTAATTATCACTATCGTACTAGAATCTT 54100 Query 30369 TAAAGTAGTTACTGACCATGTTAATGGGC-GAGTGCAAGCTAGTCTAGGCGATAATTTAA 30427 ||||| | | ||| | | | ||| | || ||| | ||| | || || ||||||| Sbjct 54099 CAAAGTGAGAATTAACCGTTTAACTGGCCAGACCTCAATCGAGT-TGGGTGACAATTTAA 54041 Query 30428 GTGGAAACTCAATTAATCGCCAGTTGTCACAAGTTCAAAGCAATATCTCTGACCTTGATA 30487 | | || | | || | | ||| || | | ||| ||| | || || Sbjct 54040 CCAAAGATGCACGAA---GACAATCAGCGCAAATTTCGAATAGTATTTCTAATCTGGAAT 53984 Query 30488 ATAATAAAATGACATTTTATGACTCCACAGAAATTGGAAAGTATCAAGACGATATTATGC 30547 ||||| ||||| || || || || || ||||| || || | ||||| || || |||| Sbjct 53983 CAAATAAGATGACTTTCTACGAATCAACCGAAATCGGTAAATTCCAAGATGACATCATGC 53924 Query 30548 GAGGTGCTGGTGCGAACGGTGGCTCGATTTACATGGTCAACGGAATTGAAGCTGGTGTAT 30607 | || || || || ||||| ||||| || | || || ||| ||||| | | Sbjct 53923 GTGGCGCAGGGAAAAATGGTGGTTCGATCCTTTTGATGAATGGTCAAGAAACTGGTATTT 53864 Query 30608 CACAATCAAGAGAGACCTATGAGCAAGTCTTTATGGATGG 30647 | | |||||| ||||| || || |||||| |||| Sbjct 53863 CTGACGGCAGAGAGCCCTATCAGATGGTTTTTATGAATGG 53824 Score = 91.5 bits (100), Expect = 3e-14 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 28100 GGAATATTTGACA-GCTTATCTAAAATTAATCTTCTTGACATTGGTAAGGCTATTATTGA 28158 ||| | ||||||| ||||| ||| ||||||| || ||| || || || || || Sbjct 56398 GGATTGTTTGACACGCTTAAGGAAA-TTAATCTGTGGGAAGCTGGAAAAGCAATCATGGA 56340 Query 28159 TGGTTTTGTAAAAGGCCTAAAAAGTGCCTGGGAAGCGGGTATGAAGTTTATTGGCGGAAT 28218 | | ||| || |||| ||| | | ||| ||| |||| | | | ||| | || ||||| Sbjct 56339 TAGCTTTCTAGAAGGGCTACAGAATGCTTGGAAAGCAGTTCAAGATTTTGTCGGTGGAAT 56280 Query 28219 TGGAGATTGGATTAAAAAACATAAAGGTCCAATCC-GTGTCGACAGAAAACTTTTAACTC 28277 ||| ||||||||| || | ||||| || || | || | || ||||||||||| | || Sbjct 56279 TGGTGATTGGATTCGTGAAAACAAAGGACCGATACAGTAT-GATAGAAAACTTTTGATTC 56221 Query 28278 CCGCTGGTAATGCCATTATGAATGGTTTGAA 28308 | || |||||||| |||||| | ||||| || Sbjct 56220 CGGCGGGTAATGCGATTATGGAAGGTTTAAA 56190 >seq14859 Length=68005 Score = 163 bits (180), Expect = 7e-36 Identities = 263/374 (70%), Gaps = 3/374 (1%) Strand=Plus/Plus Query 31743 AATG-GGTTGGAGAACGAGTCCAATCACCGGAGCGCAAGAATTTCACAATGCTATGGACT 31801 |||| || ||||| | |||||||| | | |||||||| || |||| || || | Sbjct 44258 AATGTGGATGGAGGAAAAGTCCAATTAATAATGAACAAGAATTCCATAATGGAATTGATT 44317 Query 31802 TGGTTAATGGCAATCCAACAACTCCAATCTTAGCTTCTAACGATGGTCAAGTGGTCCAAG 31861 | | ||||| ||||| | || || || || || || |||||| |||| || || | Sbjct 44318 TTATAAATGGAAATCCTAATACACCTATTTTTGCAGCTTTAGATGGTGAAGTTGTTCAGG 44377 Query 31862 CAGGAAGTAATTATTATGACTGGTATGGAAATTACACGGTCATCAAGCATGCGGATGGAC 31921 | || ||||||||||||||||||||| |||||| ||| || || ||| ||||| Sbjct 44378 CGGGTGCTAATTATTATGACTGGTATGGTAATTACGTGGTTATTAAACATAATAATGGAA 44437 Query 31922 TTTATACAGGGTACGCACATCAAAGCAGAATCGATGTTTCTGTGGGTCAAAATGTTAAAA 31981 | ||||| || || ||| | | || ||||||||||| || ||||| || | | Sbjct 44438 AGTGGACAGGTTATGCTCATTTATCTCGTATTGATGTTTCTGTTGGACAAAAAGTCCAGA 44497 Query 31982 AGGGCCAACAAATTGGACTTATGGGAGCGACTGGTCCGGTCACTGGACCACATTTGCACT 32041 | ||| |||||||| | |||||| | |||||||| |||||| |||| | || | Sbjct 44498 AAGGCGCTCAAATTGGCTTGATGGGAACAACTGGTCCATCTACTGGAGAACATCTACATT 44557 Query 32042 TCCAATTTATGGACCAATATTGGCCATCATCAAG-CGCTCACTTTAAGAATCCAAGGGAT 32100 | ||| ||||| | | |||||||| ||| | || | | | ||| |||||||||| || Sbjct 44558 TTCAAATTATGAAAAATTATTGGCC-TCAGCCAGTTGTTGATTTTGAGAATCCAAGAAAT 44616 Query 32101 TATATCAAATTTTA 32114 |||||| ||||||| Sbjct 44617 TATATCCAATTTTA 44630 >seq1539 Length=57711 Score = 143 bits (158), Expect = 6e-30 Identities = 232/330 (70%), Gaps = 3/330 (1%) Strand=Plus/Minus Query 8269 AAAAGGA-AGAACAAAATGATTAACAATGTCACTCTAGTAGGGCGAATCACTAAAGAACC 8327 ||| ||| ||| |||||||| || ||||| ||| ||||||| || | || ||||| || Sbjct 16189 AAATGGAGAGATAAAAATGATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCC 16130 Query 8328 TGAACTTAGATATACACCACAAAATAAAGCAGTTGCCACTTTTACTCTTGCAGTTAATCG 8387 || | | ||||| || | |||||| ||||||||||| | || |||||||| Sbjct 16129 CGATTTACGTTATACCGCAAGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCG 16070 Query 8388 AGCATTTAAAAACGCTAATGGAGAAAGAGAAGCTGACTTTATCAGTTGTGTTATTTGGGG 8447 |||| || || || | |||||||||| ||||||| |||||| |||||| | Sbjct 16069 CAATTTTACGAATCAAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCG 16010 Query 8448 TAAATCAGCCGAAAACTTGGCCA-ATTGGACTCATAAAGGTCAATTAATTGGAGTTATTG 8506 |||| |||| |||| |||| | ||| | || | || ||| ||||| || || | | Sbjct 16009 TAAACCAGCGGAAACGATGGCTACATTAG-CTAAAAAGGGTAGTTTAATCGGCGTCGTCG 15951 Query 8507 GGAATATCCAGACTCGAAACTATGAGAACCAACAAGGGCAGCGTGTTTATATTACGGAGG 8566 | || || || || | ||||| ||||| ||||| |||||||| || | || || | Sbjct 15950 GACGGATTCAAACGCGGACTTATGACAACCAGCAAGGACAGCGTGTCTACGTGACTGAAG 15891 Query 8567 TTGTCGCAAGTAATTTCCAAGTACTAGAAA 8596 |||| || |||||||||| || |||||| Sbjct 15890 TTGTGGCCGATAATTTCCAACTATTAGAAA 15861 >seq3145 Length=45091 Score = 98.7 bits (108), Expect = 2e-16 Identities = 215/318 (68%), Gaps = 3/318 (1%) Strand=Plus/Plus Query 8271 AAGGAAGAACAAA-ATGATTAACAATGTCACTCTAGTAGGGCGAATCACTAAAGAACCTG 8329 || || ||| ||| |||||||||||||| ||| ||||||| || | || ||||| |||| Sbjct 1780 AAAGAGGAAAAAATATGATTAACAATGTGACTTTAGTAGGACGTTTAACGAAAGACCCTG 1839 Query 8330 AACTTAGATATAC-ACCACAAAATAAAGCAGTTGCCACTTTTACTCTTGCAGTTAATCGA 8388 | | | ||||| | | | |||| || || || ||||| ||||||||||||||| Sbjct 1840 ATTTGCGCTATACGAGCGGTGGA-AAAGGTGTGGCTACATTTACCCTTGCAGTTAATCGA 1898 Query 8389 GCATTTAAAAACGCTAATGGAGAAAGAGAAGCTGACTTTATCAGTTGTGTTATTTGGGGT 8448 |||| || ||||| | ||||| ||||| | ||||| |||||| | Sbjct 1899 AACTTTACCAATCAAGCCGGAGAGCGTGAAGCAGACTTCGTTCAATGTGTGATTTGGAGG 1958 Query 8449 AAATCAGCCGAAAACTTGGCCAATTGGACTCATAAAGGTCAATTAATTGGAGTTATTGGG 8508 ||| |||| |||| |||| |||| ||| | || || | || || | || Sbjct 1959 AAACCAGCGGAAACACTGGCTAATTATGCTCGCAGGGGAACCTTGCTAGGCGTGACCGGA 2018 Query 8509 AATATCCAGACTCGAAACTATGAGAACCAACAAGGGCAGCGTGTTTATATTACGGAGGTT 8568 || || || || ||||| || || |||||||| ||||||||| | ||||| ||| Sbjct 2019 CGAATTCAAACACGTTCTTATGACAATCAGCAAGGGCAACGTGTTTATGTAACGGAAGTT 2078 Query 8569 GTCGCAAGTAATTTCCAA 8586 || ||| ||||| ||| Sbjct 2079 GTAGCAGAGAATTTTCAA 2096 >seq640 Length=68089 Score = 86.0 bits (94), Expect = 1e-12 Identities = 87/112 (78%), Gaps = 1/112 (1%) Strand=Plus/Minus Query 11360 AGAATATACTTGTGAAACGTGTGGATTTTGCCACATTGACGGTTGGGAAGCTGGGGCATG 11419 |||| | |||||||| |||||| |||||||||||||| |||||||| ||| || Sbjct 26287 AGAAGACCCTTGTGAAGACTGTGGAGCATGCCACATTGACGGCTGGGAAGCCATGGCGTG 26228 Query 11420 TTGGAGTTTAGCCAATGACCCTGATTATGACCCATTCGATATTT-AAAGGAG 11470 |||||| || ||| ||||||||||| ||||| | || |||| ||||||| Sbjct 26227 TTGGAGCTTTCTCAACGACCCTGATTACGACCCGTGGGAAATTTAAAAGGAG 26176 >seq52331 Length=217 Score = 82.4 bits (90), Expect = 2e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 8284 ATGATTAACAATGTCACTCTAGTAGGGCGAATCACTAAAGAACCTGAACTTAGATATACA 8343 |||||||||||||| ||| | ||||| || | || ||||| ||||| | | ||||| Sbjct 191 ATGATTAACAATGTAACTTTGGTAGGACGTTTAACAAAAGACCCTGATTTGCGCTATACG 132 Query 8344 CCACAAAATAAAGCAGTTGCCACTTTTACTCTTGCAGTTAATCGAGCATTTAAAAACGCT 8403 || || || || || |||||| | ||||| |||||| ||||| ||| Sbjct 131 TCAAGTGGCAAGGCGGTAGCAGGTTTTACATTAGCAGTCAATCGAAGATTTACGAACCAG 72 Query 8404 AATGGAGAAAGAGAAGCTGACTTTATCAGTTGTGTTATTTGGGGTAAATCAGCCGAAAAC 8463 ||| | | || || |||| |||| ||||| |||||||| |||||||| |||| | Sbjct 71 GCAGGACAGCGTGAGGCGGACTATATCCAATGTGTCATTTGGGGGAAATCAGCGGAAACC 12 Query 8464 TTGGCCAATT 8473 || || |||| Sbjct 11 TTAGCAAATT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117408381862080