Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_004996.1 Length=34692 Score E Sequences producing significant alignments: (Bits) Value seq7607 120 7e-23 seq14859 100 6e-17 >seq7607 Length=81728 Score = 120 bits (132), Expect = 7e-23 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 27252 TTAAAAATATCAATCTTTGGGAAGCTGGTAAAGCAATCCTTAACGGCTTCTTAGGCGGTT 27311 |||| | || ||||| ||||||||||| ||||||||| | | |||| ||| || Sbjct 56382 TTAAGGAAATTAATCTGTGGGAAGCTGGAAAAGCAATCATGGATAGCTTTCTAGAAGGGC 56323 Query 27312 TAAAATCTGCCTGGGAAGGAGTTACAAACTTTGTTGGAGGTATTGCAAACTGGATTCGTG 27371 || | ||| ||| ||| |||| | | ||||| || || |||| | |||||||||| Sbjct 56322 TACAGAATGCTTGGAAAGCAGTTCAAGATTTTGTCGGTGGAATTGGTGATTGGATTCGTG 56263 Query 27372 ATCACAAAGGTCCTATTGAATATGACCGTAAGCTTTTGATTCCAGCAGGTAATGCAATTA 27431 | ||||||| || || | ||||| | || ||||||||||| || |||||||| |||| Sbjct 56262 AAAACAAAGGACCGATACAGTATGATAGAAAACTTTTGATTCCGGCGGGTAATGCGATTA 56203 Query 27432 TGGGAAGTTTAGACAATGG 27450 ||| | ||||| |||| || Sbjct 56202 TGGAAGGTTTAAACAAAGG 56184 >seq14859 Length=68005 Score = 100 bits (110), Expect = 6e-17 Identities = 134/180 (74%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 1619 GTTGTCTTATGATAGACCTTATTATACATGGCTTTCTTGGGATTCTTTA-TCCATCCCAC 1677 || ||||| | ||| | ||||| || ||||| ||||| |||||| ||||||| Sbjct 12109 GTAGTCTTTTTATAAATTTTATTGTATGCAGCTTTTTTGGG--TCTTTAATCCATCCAGA 12166 Query 1678 GCCTTTCTTCCCATATCCAGGAACAATAGCTTTTTTAGCTTGTCTTTTCCATTTGCTGGT 1737 ||||||||| ||||| ||||||| | |||||||| || ||||| || | || Sbjct 12167 GCCTTTCTTGCCATAACCAGGAATCACTGCTTTTTTTATTTTCCTTTTTGCCTTTCCAGT 12226 Query 1738 AGTTCTAGCTTTCA-AGCTCTTTTTTAGACTTGGTGTTCTCATTCCGATTTTCATGCTAT 1796 ||||||||| | | || | ||||||| ||||||| |||||||||| |||||||| |||| Sbjct 12227 AGTTCTAGCGCTAATAGAT-TTTTTTATACTTGGTTTTCTCATTCCTATTTTCAT-CTAT 12284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110681993064432