Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq20 244 7e-60 seq32113 129 4e-25 seq1641 96.9 2e-15 seq16183 86.0 4e-12 >seq20 Length=148542 Score = 244 bits (270), Expect = 7e-60 Identities = 519/767 (68%), Gaps = 12/767 (2%) Strand=Plus/Minus Query 80672 AAACTAAAAACGAACAAGTTCACCGACACCATAGACTATTTAATTTTACCGAACTTTTCA 80731 ||||| ||||| |||||||||||||||||||| |||||||| || || || ||||| | Sbjct 87129 AAACTCAAAACCAACAAGTTCACCGACACCATTGACTATTTGATCTTGCCACACTTTATA 87070 Query 80732 TTATGGGATCACAATTTTCTAGTGTTTTTGAATAAAAAATTTAATAGCAAAAA--ACAAG 80789 || ||||| ||||||||| | | ||| | || ||| || || |||| | |||| Sbjct 87069 TTGTGGGACCACAATTTTGTCATTTTTCTCAACAAAGCGTTCAACTCCAAACACGACAAC 87010 Query 80790 GAGGACTGGTAAACATATGGAACGTGATGCAAAAAACACCACTGACACAAGGCGTGATAA 80849 | |||| |||| | || || ||||||||| ||| ||||| ||| | || | Sbjct 87009 A--GCTTGGTGGACATTTCGAGCGCCCTGCAAAAAATTAAACTCACACACGGCATCATCA 86952 Query 80850 AAGATCTAATACAAAACAAAAACGGTTACGCCGGTCAATATCTCTATTCGACATTTTTAA 80909 |||| | | | || | ||||||||||||||||| ||||||| | |||||||| ||| | | Sbjct 86951 AAGACCAATTGCAGAGCAAAAACGGTTACGCCGTTCAATATTTGTATTCGACGTTTCTCA 86892 Query 80910 ACACTAGCAGTTTTTATGCAAACGTGCAATGCTGCAACGGTATAAACGAGATCGTTCCGC 80969 |||| | || ||||| |||||||| || | ||||| | ||||| |||||||||| Sbjct 86891 ACACCGCCTCCTTCTATGCCAACGTGCAGTGTTTGAACGGCGTCAACGAAATCGTTCCGC 86832 Query 80970 CCGTTATGAGCGTCCAACGTTATTACGGCAGACCGGTCGAGAACGTTCGTGTATGGAACA 81029 | |||||| | || || |||||| | | ||| | ||||| || | |||| || Sbjct 86831 CGCGCGCCAGCGTCAACCGCTACTACGGCCGGCGGGTGGGCAACGTGCGCGCCTGGACCA 86772 Query 81030 CGCGTCACCCTAACATATCTCAATTGTCCACGCAATTTTCTAGGGTTGTTC-CTTCTA-- 81086 |||| ||||| ||||| || || |||||| | || || || | | || | Sbjct 86771 CGCGACACCCCAACATCAGCCAGCTGAGCACGCAGGTGTC---GGACGTGCGCCTCAACG 86715 Query 81087 ACAATATGACAAATTGGAATGTCAAAATAGGTCTCGGTACGTTTGTGGGCGCCAATCGCG 81146 || | || ||||||| |||||| | || | || | ||| ||||||||| || Sbjct 86714 ACTCCAACACCGATTGGAACGTCAAAGTGGGCTTGGGCATATTTCCGGGCGCCAACACCG 86655 Query 81147 ATTGCGACGGAGACAAGGAAGTGATAACTTTTTTACCACAACCAAATTCTTTAATAGAAT 81206 ||||||| || ||||| || | || || ||| | || ||||| || | | || || Sbjct 86654 ATTGCGATGGCGACAAAAAAATCATCACCTTTCTGCCGCAACCCAACAGTCTCATCGACC 86595 Query 81207 TAGAATCTATGCTTTATAGCGATCCTAAATATTCGTTTATATGTTTCGATAAAAATAAAC 81266 | || | | | | || |||| || | | || ||||| ||||| || ||| || Sbjct 86594 TGGAGTGTTTATTGTACGGCGACCCGCGGTTTAATTTCATATGCTTCGACAAGAATCGAC 86535 Query 81267 TGACTTTTGTCTCTCAACAAATTTATTATTTGTATAAAAAGTATAAAGAAGTCGATGATG 81326 | | || || || ||||||||||| ||| ||| ||||| | | | |||| | Sbjct 86534 TCAGCTTCGTGTCCCAACAAATTTACTATCTGTTCAAAAACATTGACGCGCTCGAACGCG 86475 Query 81327 TGTTGCGACAATTGCCCGGAGTGTATGCGTTGTGGTGTATG-ACAAAAGATTGCACTCTG 81385 ||| ||||||||||| ||| | ||||||| | ||| || ||||| | | Sbjct 86474 CGTTTGCACAATTGCCCGTCGTGAACATGTTGTGGCGCATGCACGCGCACTTGCAGT-TT 86416 Query 81386 GCGAAACGGTTTGAGAAGTTGTTAAACGATGTCGCACTAATGTTCAG 81432 ||| | || || || | |||||| ||| ||||| || ||||||| Sbjct 86415 GCGCAGCGTTTGGAAACGTTGTTGCGCGACGTCGCCCTCGTGTTCAG 86369 Score = 120 bits (132), Expect = 2e-22 Identities = 181/255 (71%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 217 ACCTTGTTCAAAGAAATTCGTCGAGTACATCCCGATACGATGAAGCTTGTGTGCAACTGG 276 || ||||||||||| ||||| || | || || ||||||||||| ||| ||||||| Sbjct 136713 ACTTTGTTCAAAGAGATTCGCAATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGG 136772 Query 277 AGCGGGAAAGAGTTTCTGAGAGAGACTTGGACTCGTTTCATTTCCGA-AGAATTCCCGAT 335 ||||| ||||||||| || | || |||||||| |||||| | || || ||||| || Sbjct 136773 AGCGGCAAAGAGTTTTTGCGTGAAACTTGGACCCGTTTCGTCGAGGACAGTTTTCCC-AT 136831 Query 336 CACCACCGATCAGGAGATCATGGACCTGTGGTTCGAGATTCAGCTGCGACCGATGCATCC 395 || ||| |||||| | |||||| ||| ||| ||| | ||| |||| | | || Sbjct 136832 TGTCAACGACCAGGAGGTGATGGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCC 136891 Query 396 CAATAGGTGTTACAAGTTCACGATGCAATACGCGCTGGGCGCTCACCCCGATTACGTGGC 455 ||| | ||||||||||| | ||| ||||||| | || |||| |||||| | Sbjct 136892 CAACCGTTGTTACAAGTTTTTGGCTCAACACGCGCTCCGTTGGGACGCCGAGTACGTGCC 136951 Query 456 TCACGATGTTATCCG 470 ||||| || || || Sbjct 136952 GCACGAAGTGATTCG 136966 Score = 109 bits (120), Expect = 3e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 90117 CAATGCAAACTTTCGGCCATTCGGTTTCCCATAAAAGATTGATTAATGCTCCATTGATCG 90176 || ||||||||||| ||||| || || |||| ||| || ||||| || |||| || ||| Sbjct 99205 CATTGCAAACTTTCCGCCATGCGATTGCCCACAAACGACTGATTCTTGGTCCACTGGTCG 99146 Query 90177 AGACGCGTGCCTTCCAACTTTTCGTAACCTGTAACATTTTTACCTATAAATTCTTTGTAT 90236 | ||||||||| |||| ||||||| || || || | || || |||||| || Sbjct 99145 AAACGCGTGCCCTCCACTTTTTCGTGGCCCGTGTGGTTGCTCTTGATGAACTCTTTGAAT 99086 Query 90237 ATGTTGTCGGGCGTATTGTTAAAAAACATATAAGGCGTACGAATGATGGGATA 90289 ||||||||||| || |||||||| ||||| || || | || |||||||| Sbjct 99085 ATGTTGTCGGGAGTGTTGTTAAACAACATGTACGGTATGTTAAATATGGGATA 99033 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/199 (72%), Gaps = 10/199 (5%) Strand=Plus/Minus Query 92109 TAATCTTTAGCGTAAACGTCGCGTACATACAACACGTCGTCGATTTTGTCGTACACTAGC 92168 ||||| | ||||| |||||||| || ||||||| ||||| ||||||||||| || Sbjct 96910 TAATCGCTGGCGTACACGTCGCGCGCAAACAACACATCGTCCTGCTTGTCGTACACCAGT 96851 Query 92169 TGTATAGCGCGATTAACTATAC-GATCGTCATCGTAGTTTCCATACAAAAATATACG-TT 92226 || || || ||||| | | | | || | ||| ||| || |||||||| ||||| || Sbjct 96850 TGGATGGCACGATTGA-TGTGCTTCTCCTGGTCGACGTTGCCGTACAAAAACATACGCTT 96792 Query 92227 TCATCTTTTTGTTTCTAGCGTATTGTTTATCGAAAAAATTGTGCACAAGCACATTGTTGT 92286 || |||| | |||||| |||| ||| ||||||||||| | | | ||||||| Sbjct 96791 GCA-----ATGTT--TTGCGTATAGTTTGTCGTAAAAATTGTGCGCCAAAATGTTGTTGT 96739 Query 92287 TCATCATGATGTTAGGAAA 92305 |||| | ||||| ||||| Sbjct 96738 TCATGAGAATGTTGGGAAA 96720 Score = 86.0 bits (94), Expect = 4e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 91489 CCACCATTTCGTAATTCAGATCGGGCAGGCGCGTGTTGTGACACAGAAAAAATTTTTTGC 91548 ||| ||| ||||||| | | |||||| ||| |||| | |||||||||||||| |||| Sbjct 97581 CCATCATGTCGTAATCGACAGAGGGCAGTCGCACGTTGCGGCACAGAAAAAATTTCTTGC 97522 Query 91549 CCGCTACAGTCATTTCGCCATGaaaaaaaCTATCAACAAATTTTACATAATC 91600 |||| || ||||| || || || |||||||| |||| | || ||| |||| Sbjct 97521 CCGCCACCGTCATCTCACCGTGGAAAAAACTGTCAATGTACTTGACAAAATC 97470 >seq32113 Length=13445 Score = 129 bits (142), Expect = 4e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| || | || || |||||||| ||||| || ||||| | | || || | Sbjct 7576 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCG 7635 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||||||||||||| || || |||||||| || || | || |||||||| || Sbjct 7636 TCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 7695 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || ||| |||||| ||| ||| || ||| |||| ||| |||| ||| || Sbjct 7696 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 7755 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT 33375 ||||| |||||||| ||||| || || || ||||| || || Sbjct 7756 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGAT 7796 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||| || |||| || |||||||| || |||||||||||||||||| || | || || Sbjct 6669 CACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTC 6728 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279 ||||||||||||| ||| || | || || ||||| | ||| ||||| || || || Sbjct 6729 CAATTGCTTTCCAGCAAAAATGAGGCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCTTG 6788 Query 33280 AATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTT 33339 || ||| || | | ||| ||||| |||| || ||||| || || || || Sbjct 6789 TATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTT 6848 Query 33340 TCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || | ||||| || || |||||||| Sbjct 6849 TCCAGTCAATGTTTTGACAAATATTTGCAT 6878 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| | |||| || ||||| | || ||||||||||| || ||||| ||||| Sbjct 6879 ACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGA 6938 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || || | || || | ||||| ||| ||| || | |||||| || || | ||| Sbjct 6939 CAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGG 6998 Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || || ||||| || |||| ||| ||||| ||| ||| ||||| || | Sbjct 6999 AATACCCTCTTTATCTTGAATCTTTGCC---TTTACATTTTCAATGGTGTCAGATGGCTC 7055 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||||||||| || || || || || || || || || |||||||| Sbjct 7056 CACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 7106 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| | |||| || | ||| | || ||||| ||||| || ||||| ||||| Sbjct 7107 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 7166 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || || | || ||||||||||| ||| ||| || | ||| ||||| || | || Sbjct 7167 CAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 7226 Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||| ||||| || | | | || ||| || ||| ||| ||||| | || Sbjct 7227 GATGCCCTCTTTGTCTTGGATTTTAGC---TTTCACATTTTCAATTGTGTCAGAAGCTTC 7283 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || | ||| || |||||||| || || ||||| || || |||||||| Sbjct 7284 AACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 7334 >seq1641 Length=3631 Score = 96.9 bits (106), Expect = 2e-15 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||| | ||||||||| || || ||||| || ||||| |||||||| | || || || Sbjct 2367 CACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 2308 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTC 33276 | ||| || ||| ||| || |||||||||||||| | || || ||||| || || Sbjct 2307 TAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 2248 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 | | | || |||||| ||| || || || || | || || || || || || Sbjct 2247 GATTTTAGC---TTTTACATTTTCTATAGTATCAGAGGCCTCGACCTCGAGGGTAATGGT 2191 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| |||||||| || || |||||||||||||| Sbjct 2190 TTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 2158 >seq16183 Length=3749 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | ||| | || | ||||| || || ||||| || || ||||||||||| Sbjct 625 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 684 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | || || || || | ||||||||| ||| || | | |||||| || | ||| Sbjct 685 AGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 744 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 || || ||||| || ||| | ||| || ||| ||| || || || | ||| Sbjct 745 ATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACT 804 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| ||| || || || || || | || ||||||||||||||||| Sbjct 805 TCCAAAGTGATAGTCTTGCCAGTCAATGTCTTTACGAAAATTTGCAT 851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318155657331432