Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq32113 102 6e-17 seq1641 102 6e-17 seq20 100 2e-16 >seq32113 Length=13445 Score = 102 bits (112), Expect = 6e-17 Identities = 163/230 (71%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATC 43968 || ||||| || || || ||||||||||||||||| || | | || || | || Sbjct 7579 AATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTG-CGTCCGTC 7637 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 |||||||| ||||| || || ||||| ||||| || || |||| | ||||| || || Sbjct 7638 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 7697 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| ||| || | ||| |||||| | || || || || | ||||| || Sbjct 7698 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 7757 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCATGTCGAGTCTTTGTAACA 44138 |||||| || | || |||||||| || ||||| | || | | ||||||| Sbjct 7758 TTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGA-TATCTGTAACA 7806 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 || || |||||||| || || ||||||||||||||||| |||| ||| |||| Sbjct 7351 AATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCT 7410 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 |||| ||||||||| ||||| |||| || || || || | || | ||| ||||| ||| Sbjct 7411 TCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTCT 7470 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 || ||| || || | | | ||| || | ||| || || || | || || ||| Sbjct 7471 TGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTACCTCTAAAGTGATGGTT 7530 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || | |||||| ||||| || ||||| Sbjct 7531 TTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 7562 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATCGT 43970 ||| || || || || |||||| |||||||| ||||| | || || || |||| | Sbjct 6669 CACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTG-CGACCATCTT 6727 Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030 ||||||| ||||| ||||| || | || || ||||| | || | || || |||||| Sbjct 6728 CCAATTGCTTTCCAGCAAAAATGAGGCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCTT 6787 Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090 ||||| |||||| | ||| || || | || || || || | ||||| || | Sbjct 6788 GTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCT 6847 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || || || || || |||||||||||||| Sbjct 6848 TTCCAGTCAATGTTTTGACAAATATTTGCAT 6878 >seq1641 Length=3631 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 || |||||||| || || || ||| ||| |||| || | |||||| || ||||| Sbjct 2348 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 2289 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 ||||| ||||||||||| | || | |||||| |||||| ||||| ||| || | Sbjct 2288 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 2229 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 | | |||||| | | ||| || |||| ||||| |||||||| || | ||||| || Sbjct 2228 TCTATAGTATCAGAGGCCTCGACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 2169 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 2168 AAAATTTGCAT 2158 >seq20 Length=148542 Score = 100 bits (110), Expect = 2e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 101567 CAGTGCAAACCTTCAGCCAAACGATTTCCTACAAATGATTGATTTATACTCCATTGATCG 101626 || ||||||| ||| |||| ||||| || ||||| || ||||| | |||| || ||| Sbjct 99205 CATTGCAAACTTTCCGCCATGCGATTGCCCACAAACGACTGATTCTTGGTCCACTGGTCG 99146 Query 101627 AGCCTAGTACCCTCCAACTTTTCGTAACCCGTAATATTTTTACCTATAAACTCCTTATAT 101686 | | || ||||||| ||||||| ||||| || | || ||||| || || Sbjct 99145 AAACGCGTGCCCTCCACTTTTTCGTGGCCCGTGTGGTTGCTCTTGATGAACTCTTTGAAT 99086 Query 101687 ATGTTGTCGGGTGTGTTGTTAAAAAACATATACGGTAT 101724 ||||||||||| ||||||||||| ||||| |||||||| Sbjct 99085 ATGTTGTCGGGAGTGTTGTTAAACAACATGTACGGTAT 99048 Score = 98.7 bits (108), Expect = 7e-16 Identities = 374/586 (64%), Gaps = 6/586 (1%) Strand=Plus/Plus Query 166 TACATGGTGACCGAGGATCCATTTCGTGGACCCGGCAAGAATGTAAGGATCACCCTTTTC 225 || || ||| |||| || || || || |||||||| || || | | || | ||| Sbjct 136662 TATATCGTGGCCGAAGACCCCTTCACCGGGCCCGGCAAAAACCAAAAGCTAACTTTGTTC 136721 Query 226 AAGGAAATTAGACGTGTCCACCCAGACACAATGAAGCTGGTATGCAACTGGAGCGGCAAA 285 || || ||| | ||| | || ||||| ||||||||||| |||||||||||||||| Sbjct 136722 AAAGAGATTCGCAATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGGAGCGGCAAA 136781 Query 286 GAATTCCTTCGCGAGACTTGGACCCGTTTCATCTCTGAAGAATTTCCCATCACCACAGAC 345 || || | || || ||||||||||||||| || || |||||||| || ||| Sbjct 136782 GAGTTTTTGCGTGAAACTTGGACCCGTTTCGTCGAGGACAGTTTTCCCATTGTCAACGAC 136841 Query 346 CAAGAAATTATAGATTTGTGGTTTGAGCTTCAGCTACGACCAATGCACCCTAACCGTTGT 405 || || | || || ||| | | | | | || |||| | | || ||||||||| Sbjct 136842 CAGGAGGTGATGGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCCCAACCGTTGT 136901 Query 406 TACAAATTCACTATG---CAGTATGCTCTCTGTGCCCATCCCGATTATGTCGCTCACGAT 462 ||||| || | || || | || ||| || | |||| || || | ||||| Sbjct 136902 TACAAGTT---TTTGGCTCAACACGCGCTCCGTTGGGACGCCGAGTACGTGCCGCACGAA 136958 Query 463 GTGATCCGCCAGCAGGATCCCTACTATGTAGGACCTAACAATATCGAGCGTATCAATCTT 522 ||||| ||| || ||| || || || | |||||| | | |||| | | Sbjct 136959 GTGATTCGCATCGTCGAACCCATGTACGTGGGCCAGAACAATGAGTACAGAATCAGTTTG 137018 Query 523 TCCAAGAAGGGTTTCGCTTTCCCACTCACATGCCTACAGTCCGTCTACAATGACAACTTT 582 | || || || || ||| ||| | |||| || |||| || ||| Sbjct 137019 GCGAAACGCGGCGGCGGTTGCCCCATCATGAACATACACAGCGAGTACACCAACTCGTTT 137078 Query 583 GAGAATTTCTTTGATGACGTTCTGTGGCCGTATTTCCACCGTCCCCTGGTGTATGTAGGT 642 || ||| | | ||| | ||| | | || || ||| | ||||| | || Sbjct 137079 GAATCGTTCGTCAACCGCGTCATCTGGGAGAACTTTTACAAGCCCATCGTGTACATTGGC 137138 Query 643 ACTACGTCTGCCGAAATTGAGGAGATCATGATTGAAGTTTCTCTGTTGTTCAAGATCAAG 702 || ||||||||| ||||| || | || ||||| || || ||||||| | || Sbjct 137139 ACCGACTCTGCCGAAGAGGAGGAAATTCTCATCGAAGTGTCGCTCGTGTTCAAAGTTAAA 137198 Query 703 GAGTTTGCACCCGACGTGCCCCTATTCACCGGTCCAGCCTATTAAA 748 ||||||||||| |||| ||| || ||||||||||| || ||||||| Sbjct 137199 GAGTTTGCACCTGACGCGCCTCTGTTCACCGGTCCCGCATATTAAA 137244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354085420476432