Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq32113 102 6e-17
seq1641 102 6e-17
seq20 100 2e-16
>seq32113
Length=13445
Score = 102 bits (112), Expect = 6e-17
Identities = 163/230 (71%), Gaps = 3/230 (1%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATC 43968
|| ||||| || || || ||||||||||||||||| || | | || || | ||
Sbjct 7579 AATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTG-CGTCCGTC 7637
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
|||||||| ||||| || || ||||| ||||| || || |||| | ||||| || ||
Sbjct 7638 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 7697
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| |||||| ||| || | ||| |||||| | || || || || | ||||| ||
Sbjct 7698 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 7757
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCATGTCGAGTCTTTGTAACA 44138
|||||| || | || |||||||| || ||||| | || | | |||||||
Sbjct 7758 TTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGA-TATCTGTAACA 7806
Score = 98.7 bits (108), Expect = 7e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| || |||||||| || || ||||||||||||||||| |||| ||| ||||
Sbjct 7351 AATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCT 7410
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
|||| ||||||||| ||||| |||| || || || || | || | ||| ||||| |||
Sbjct 7411 TCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTCT 7470
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
|| ||| || || | | | ||| || | ||| || || || | || || |||
Sbjct 7471 TGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTACCTCTAAAGTGATGGTT 7530
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || || | |||||| ||||| || |||||
Sbjct 7531 TTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 7562
Score = 86.0 bits (94), Expect = 4e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATCGT 43970
||| || || || || |||||| |||||||| ||||| | || || || |||| |
Sbjct 6669 CACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTG-CGACCATCTT 6727
Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030
||||||| ||||| ||||| || | || || ||||| | || | || || ||||||
Sbjct 6728 CCAATTGCTTTCCAGCAAAAATGAGGCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCTT 6787
Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090
||||| |||||| | ||| || || | || || || || | ||||| || |
Sbjct 6788 GTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCT 6847
Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| || || || || || ||||||||||||||
Sbjct 6848 TTCCAGTCAATGTTTTGACAAATATTTGCAT 6878
>seq1641
Length=3631
Score = 102 bits (112), Expect = 6e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990
|| |||||||| || || || ||| ||| |||| || | |||||| || |||||
Sbjct 2348 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 2289
Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050
||||| ||||||||||| | || | |||||| |||||| ||||| ||| || |
Sbjct 2288 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 2229
Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110
| | |||||| | | ||| || |||| ||||| |||||||| || | ||||| ||
Sbjct 2228 TCTATAGTATCAGAGGCCTCGACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 2169
Query 44111 AATATTTGCAT 44121
|| ||||||||
Sbjct 2168 AAAATTTGCAT 2158
>seq20
Length=148542
Score = 100 bits (110), Expect = 2e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 101567 CAGTGCAAACCTTCAGCCAAACGATTTCCTACAAATGATTGATTTATACTCCATTGATCG 101626
|| ||||||| ||| |||| ||||| || ||||| || ||||| | |||| || |||
Sbjct 99205 CATTGCAAACTTTCCGCCATGCGATTGCCCACAAACGACTGATTCTTGGTCCACTGGTCG 99146
Query 101627 AGCCTAGTACCCTCCAACTTTTCGTAACCCGTAATATTTTTACCTATAAACTCCTTATAT 101686
| | || ||||||| ||||||| ||||| || | || ||||| || ||
Sbjct 99145 AAACGCGTGCCCTCCACTTTTTCGTGGCCCGTGTGGTTGCTCTTGATGAACTCTTTGAAT 99086
Query 101687 ATGTTGTCGGGTGTGTTGTTAAAAAACATATACGGTAT 101724
||||||||||| ||||||||||| ||||| ||||||||
Sbjct 99085 ATGTTGTCGGGAGTGTTGTTAAACAACATGTACGGTAT 99048
Score = 98.7 bits (108), Expect = 7e-16
Identities = 374/586 (64%), Gaps = 6/586 (1%)
Strand=Plus/Plus
Query 166 TACATGGTGACCGAGGATCCATTTCGTGGACCCGGCAAGAATGTAAGGATCACCCTTTTC 225
|| || ||| |||| || || || || |||||||| || || | | || | |||
Sbjct 136662 TATATCGTGGCCGAAGACCCCTTCACCGGGCCCGGCAAAAACCAAAAGCTAACTTTGTTC 136721
Query 226 AAGGAAATTAGACGTGTCCACCCAGACACAATGAAGCTGGTATGCAACTGGAGCGGCAAA 285
|| || ||| | ||| | || ||||| ||||||||||| ||||||||||||||||
Sbjct 136722 AAAGAGATTCGCAATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGGAGCGGCAAA 136781
Query 286 GAATTCCTTCGCGAGACTTGGACCCGTTTCATCTCTGAAGAATTTCCCATCACCACAGAC 345
|| || | || || ||||||||||||||| || || |||||||| || |||
Sbjct 136782 GAGTTTTTGCGTGAAACTTGGACCCGTTTCGTCGAGGACAGTTTTCCCATTGTCAACGAC 136841
Query 346 CAAGAAATTATAGATTTGTGGTTTGAGCTTCAGCTACGACCAATGCACCCTAACCGTTGT 405
|| || | || || ||| | | | | | || |||| | | || |||||||||
Sbjct 136842 CAGGAGGTGATGGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCCCAACCGTTGT 136901
Query 406 TACAAATTCACTATG---CAGTATGCTCTCTGTGCCCATCCCGATTATGTCGCTCACGAT 462
||||| || | || || | || ||| || | |||| || || | |||||
Sbjct 136902 TACAAGTT---TTTGGCTCAACACGCGCTCCGTTGGGACGCCGAGTACGTGCCGCACGAA 136958
Query 463 GTGATCCGCCAGCAGGATCCCTACTATGTAGGACCTAACAATATCGAGCGTATCAATCTT 522
||||| ||| || ||| || || || | |||||| | | |||| | |
Sbjct 136959 GTGATTCGCATCGTCGAACCCATGTACGTGGGCCAGAACAATGAGTACAGAATCAGTTTG 137018
Query 523 TCCAAGAAGGGTTTCGCTTTCCCACTCACATGCCTACAGTCCGTCTACAATGACAACTTT 582
| || || || || ||| ||| | |||| || |||| || |||
Sbjct 137019 GCGAAACGCGGCGGCGGTTGCCCCATCATGAACATACACAGCGAGTACACCAACTCGTTT 137078
Query 583 GAGAATTTCTTTGATGACGTTCTGTGGCCGTATTTCCACCGTCCCCTGGTGTATGTAGGT 642
|| ||| | | ||| | ||| | | || || ||| | ||||| | ||
Sbjct 137079 GAATCGTTCGTCAACCGCGTCATCTGGGAGAACTTTTACAAGCCCATCGTGTACATTGGC 137138
Query 643 ACTACGTCTGCCGAAATTGAGGAGATCATGATTGAAGTTTCTCTGTTGTTCAAGATCAAG 702
|| ||||||||| ||||| || | || ||||| || || ||||||| | ||
Sbjct 137139 ACCGACTCTGCCGAAGAGGAGGAAATTCTCATCGAAGTGTCGCTCGTGTTCAAAGTTAAA 137198
Query 703 GAGTTTGCACCCGACGTGCCCCTATTCACCGGTCCAGCCTATTAAA 748
||||||||||| |||| ||| || ||||||||||| || |||||||
Sbjct 137199 GAGTTTGCACCTGACGCGCCTCTGTTCACCGGTCCCGCATATTAAA 137244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354085420476432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |