Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq1361 86.0 1e-11 >seq1361 Length=62553 Score = 86.0 bits (94), Expect = 1e-11 Identities = 249/379 (66%), Gaps = 16/379 (4%) Strand=Plus/Plus Query 8090 AAAGAAACGTATGATGCGTTTCAGACTTTTGAATACCAAGTCAATACAATGCAGACTTCA 8149 ||||| | | |||||| | || | ||| ||||| | |||||||| | ||||| Sbjct 32507 AAAGATATTTTTGATGCCATGCAAAGTTTGGAATATGAGATCAATACACTTTTCACTTCC 32566 Query 8150 AATGGTCAGACACCATTCACGACAATCAACTTCGGTTTAGGTAC---TTCGTGGGAA-GA 8205 || || || || || || || || || ||||||| |||||| || || ||| || Sbjct 32567 AACGGACAAACGCCTTTTACTTCACTCGGCTTCGGTCTAGGTAAAAATTGGTTTGAACGA 32626 Query 8206 GAAACTGATTCAGAAAAGC-ATTCTGCAAAATCGTATTGCTGGTCTAGGCAAGACTAAGA 8264 |||| || |||||| ||| | |||| || || ||| |||||| | ||| Sbjct 32627 GAAA-----TCCAAAAAGCGATTTTACAAATCCGAATCAATGGATTAGGCAG---TGAGA 32678 Query 8265 AA---ACTGCTATCTTCCCGAAACTTGTTTTCACGTTGAAAGACGGTGTTAACTTGAAAG 8321 || || || |||||||| ||| | | || || | |||||||| | || | ||| Sbjct 32679 AACGGACAGCGATCTTCCCAAAATTGATATTTACACTAAAAGACGGAATCAATCTTAAAC 32738 Query 8322 AAGGTGATCCTTGTTACGGAATCAAGAAGCTTGCTCTTGAGTGTGCAAGTAAACGCATGT 8381 | |||||| || | ||||| | | || | || ||||| | ||| | |||| Sbjct 32739 CAACTGATCCAAACTATGACATCAAACAATTAGCCTTAGAATGTGCCACAAAAAGAATGT 32798 Query 8382 ACCCAGACATTTTGAACTATGAAAAGCTAGTTGAAACAACTGGCGGATTCAAGTCGCCTA 8441 ||||||| ||| | || ||||| ||| | |||||| || || | ||||| || | Sbjct 32799 ACCCAGATATTCTAAATTATGACAAGATCGTTGAATTGACAGGAAGCTTCAAAGTACCAA 32858 Query 8442 TGGGATGTCGTTCATTCTT 8460 |||| ||||| || ||||| Sbjct 32859 TGGGCTGTCGCTCCTTCTT 32877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 781773295892160