Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq1361 154 2e-32 >seq1361 Length=62553 Score = 154 bits (170), Expect = 2e-32 Identities = 333/494 (67%), Gaps = 18/494 (4%) Strand=Plus/Minus Query 37852 CCGTTTGCGTCGAGTGCGATACGCGGCAGATTCAGAGTAACAACCCCTAGATTA----TT 37907 |||| ||| || | ||||| ||||||| |||| ||||| || |||||||| || Sbjct 32979 CCGTCTGCTTCTAAGGCGATCCGCGGCAAGTTCAACGTAACCACACCTAGATTCATTCTT 32920 Query 37908 ACGACCTTCGTGAACTTCATTGCCATTTTCGTCTTCCCAACGATGCAAGAAACTGCGGCA 37967 |||| ||| ||||| | || || ||||||| ||||| || ||||| ||| || Sbjct 32919 CCGACATTC----ACTTCTTCACCGTTCTCGTCTTTCCAACCTTGTAAGAAGGAGCGACA 32864 Query 37968 TCCCATAGGGAACTTAAAGCTGCCAGTTGTTTCAACAACTTTATCATAACTCAGAATATC 38027 ||||| || | || ||||| || || |||||| | || |||||| | |||||||| Sbjct 32863 GCCCATTGGTACTTTGAAGCTTCCTGTCAATTCAACGATCTTGTCATAATTTAGAATATC 32804 Query 38028 TGGATACATACGCTTAGAAGCGCACTCCAGTGCCAGTTGCTTGATACGATAAAGCGGGTC 38087 ||| ||||| | || | || || || | || | ||| ||||| ||| || || Sbjct 32803 TGGGTACATTCTTTTTGTGGCACATTCTAAGGCTAATTGTTTGATGTCATAGTTTGGATC 32744 Query 38088 AGTTGGCTTCAAGTTGTGTCCGTCTTTCAGAGCAAACACCAGTTTCGGGAACACCGGAGT 38147 |||||| || | ||| ||||||||| || | ||| | || ||| ||||| | || || Sbjct 32743 AGTTGGTTTAAGATTGATTCCGTCTTTTAGTGTAAATATCAATTTTGGGAAGATCGCTGT 32684 Query 38148 GATACCCTCTTTGCCAAGTCCAGCCAGTCGAACTTTCAAGATCGCTTCCTGAATCAGTTC 38207 ||| |||| | |||| | ||| | || || ||||||| || || ||| Sbjct 32683 CCGTTTCTCACTGCCTAATCCATTGATTCGGATTTGTAAAATCGCTTTTTGGAT---TTC 32627 Query 38208 AGCTTC---CCAGCTTTCACCCAGACCAAAGCCGAATGTACAGAAGGGAGTTTGACCGTT 38264 ||| ||| ||| ||| ||||| ||||||| || | || || ||||| ||||| Sbjct 32626 TCGTTCAAACCAATTTTTACCTAGACCGAAGCCGAGTGAAGTAAAAGGCGTTTGTCCGTT 32567 Query 38265 CGCGGAGTGAAGAGTG--TTCACCTCGTATTCGAGTCCCTGCATTGCATCATACACAGCT 38322 | |||||| |||| || | ||| ||||| | | ||||| |||||| | | | || Sbjct 32566 --GGAAGTGAAAAGTGTATTGATCTCATATTCCAAACTTTGCATGGCATCAAAAATATCT 32509 Query 38323 TTGTGAGTCTTTGC 38336 || | || ||||| Sbjct 32508 TTTTTGGTTTTTGC 32495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744727574868160