Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_005354.1 Length=38384 Score E Sequences producing significant alignments: (Bits) Value seq14088 136 1e-27 seq2007 89.7 1e-13 seq14859 80.6 7e-11 >seq14088 Length=28720 Score = 136 bits (150), Expect = 1e-27 Identities = 384/582 (66%), Gaps = 17/582 (3%) Strand=Plus/Minus Query 5738 AATAAACTGCAATTATTTAATTTTGAAAATCAACAAGTTAGAACTTTGACAGTTGATGAA 5797 ||||||| |||| | |||||||| ||||| || | ||| | || | | | |||| Sbjct 3188 AATAAACCGCAAATTTTTAATTTCGAAAAAAAAGATGTTCGGACAGTTTTAATAAATGAT 3129 Query 5798 GAACCATATTTTGTTGGTAAAGATGTAGCAACTATTCTTGGATATAAGAATGGTAGTAGA 5857 || |||||||||||||| |||||| |||| | || || || || || | Sbjct 3128 GACCCATATTTTGTTGGGAAAGATATAGCTGAAGTGCTAGGTTACTCAAAGCCCAGGAAT 3069 Query 5858 GATATAAATACTCACGTTGACGAGGAAGATAAGCTG-AGGTACCAAATCAGTACCGCA-- 5914 | ||| | |||||| ||||| ||||| |||| | | | |||| |||| || | Sbjct 3068 GCTATTTCGATTCACGTAGACGATGAAGACAAGCAGGATGCCCCAATTCAGGGCCCCCTT 3009 Query 5915 GGTCAGATGAGAGATCAAATATTAATTAACGAATCAGGATTGTACAGTTTGATCTTATCA 5974 ||| | | | | || |||| || || ||||| || |||||| | || || | Sbjct 3008 GGTGGAAAGCAAAACATGATTGTAATCAATGAGTCAGGTTTATACAGTCTTATTCTA--A 2951 Query 5975 AGT--AAGCTTCCCAATGCTAAAAAGTTCAAACGATGGGTTACTTCAGAAGTTCTTCCAG 6032 ||| || ||||| ||||| ||||| || ||| ||||||| || |||||||| ||| Sbjct 2950 AGTCCAAACTTCCGAATGCCAAAAAATTTAAAAGATGGGTAACGAGTGAAGTTCTACCAT 2891 Query 6033 CAATTCGCAAACACGGTGCATATATGACTGACGAAAAAGC--ATTCGATGTAGTCCGTAA 6090 ||||| | || |||| ||||| | || || ||||||| || ||| || | | Sbjct 2890 CAATTAGAAAGAACGGCGCATACCTAACCGATCAAAAAGCGTATGAGAT-TACAC----A 2836 Query 6091 CAAGACCGGGT---TAGCTGACTTACTTCAACAAGCAGCGGATCAGCTTAAACAAAAAGA 6147 ||| | | |||| || | | |||||||| || || || ||||||||||| Sbjct 2835 CAATCCAAATTCACTAGCAGATCTGTTGTTACAAGCAGGTGAACAACTAAAACAAAAAGA 2776 Query 6148 TATTGAAATTGCTGAAATGAAACCTAAGGCATTGTTTGCAGATTCAGTAGCAACTAGCCA 6207 | | | || |||||| ||||||| ||||| || ||||| ||||| | |||| Sbjct 2775 TTTGGTTATCCAAGAAATGCAACCTAAAGCATTATTCTCAGATGCAGTAAGAGGTAGCGT 2716 Query 6208 CACTACAATTTTGATTGGCGAGTTGGCCAAAATTTTAAGAGGTAATGGAATAGATATTGG 6267 | | || ||||||| || || |||| ||| ||| | || || ||| ||||||| Sbjct 2715 TAATTCATGTTTGATTAAAGAATTAGCCACGATTCTAAAACAAAACGGTATAAATATTGG 2656 Query 6268 AGCTAATCGTTTGTTTGCTTGGATGCGAGAACATGGATATCT 6309 ||||||||||| |||| | |||| |||| ||||| Sbjct 2655 GCAAAATCGTTTGTTCATTTGGTTAAGAGAGAATGGTTATCT 2614 >seq2007 Length=108395 Score = 89.7 bits (98), Expect = 1e-13 Identities = 205/301 (68%), Gaps = 11/301 (4%) Strand=Plus/Plus Query 5753 TTTAATTTTGAAAATCAACAAGTTAGAACTTTGACAGTTGATGAAGAACCATATTTTGTT 5812 ||| |||||||| | | |||| ||||| | | ||| | ||||||| |||||| Sbjct 102954 TTTGATTTTGAACAAAATGAAGTCCGAACTATTTTGTTGGATAACAAACCATACTTTGTT 103013 Query 5813 GGTAAAGATGTAGCAACTATTCTTGGATATAAGAATGGTAGTAGAGATATAAATACTCAC 5872 || ||||||||||| | | || | || ||| ||| | || || || || Sbjct 103014 GGAAAAGATGTAGCTAATGTTTTGGGCTATTCAAATACTCCTAAAGCAATTCGGGACCAT 103073 Query 5873 GTTGACGAGGAAGATAAGCTGAGGTACCAAATCAGTACCGCAGGTCAGATG--AGAGATC 5930 || ||||| ||||||||| | | || || || || | | |||| ||| | || | Sbjct 103074 GTAGACGAAGAAGATAAGACGCAGAACGAA-TC-GTTCACC--GTCA-ATGGAACAGCTT 103128 Query 5931 AAATATTAATTAACGAATCAGGATTGTACAGTTTGATCTTATCAAGT--AAGCTTCCCAA 5988 | | | || |||||||| || || ||||| | || ||| |||| || ||||| || Sbjct 103129 TATTGCTTATCAACGAATCTGGTTTATACAGCCTTATATTA--AAGTCAAAACTTCCTAA 103186 Query 5989 TGCTAAAAAGTTCAAACGATGGGTTACTTCAGAAGTTCTTCCAGCAATTCGCAAACACGG 6048 ||| |||| ||||||||||||||| ||| ||||| ||||| ||||| | ||||| || Sbjct 103187 TGCAAAAAGGTTCAAACGATGGGTAACTAGTGAAGTACTTCCGTCAATTAGAAAACATGG 103246 Query 6049 T 6049 | Sbjct 103247 T 103247 >seq14859 Length=68005 Score = 80.6 bits (88), Expect = 7e-11 Identities = 107/147 (73%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 1917 TTGAATACTTAATAACAAATGATCCTAGGGTAGACGTT--ACTTCTTTCACTTTAACAAT 1974 ||| ||| | |||| ||| ||||||| ||| | || |||| ||||||| |||| Sbjct 49465 TTGTATAAGTTATAATAAAAGATCCTAAAGTA--CTTTCAACTTTGGTCACTTTTACAAC 49522 Query 1975 AACTACATCGCCAACTTTTACTTTTGGATTATGTGGACTAACAAAGTTTAAATGCTCGCC 2034 | | ||| || ||||||| || || || | || | ||||||||||||||| || || Sbjct 49523 TAGTGAATCTCCTTCTTTTACATTAGGGTTTTCTGAAGAAACAAAGTTTAAATGTTCTCC 49582 Query 2035 AGTTTCTAAATTATATCCAAAAGCACT 2061 |||| || ||||||||||| ||||| Sbjct 49583 TGTTTGTATGTTATATCCAAATGCACT 49609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122473933919568