Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_005355.1 Length=40190 Score E Sequences producing significant alignments: (Bits) Value seq2007 134 4e-27 >seq2007 Length=108395 Score = 134 bits (148), Expect = 4e-27 Identities = 182/253 (72%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 1459 TAAATTATCTACAGCATATTGTGCTTCTTCTGGAGTAAATTTGTCCCCAGAATTAGAAGT 1518 |||||| | || ||| || | ||||||||||| |||||||| || ||| | ||| || Sbjct 100338 TAAATTTTGTATAGCGTAATCTGCTTCTTCTGCGGTAAATTTCTCACCATGTTCAGATGT 100397 Query 1519 TAATTGATCTTTAATTTCTGCTGTAGACATATTCATATCTTTTTGGTAAGTTTTAGCACT 1578 ||| || ||| | ||| || ||| |||||| ||| | || ||| || |||| || | Sbjct 100398 TAACTGGTCTCTGATTGCTTCTGGAGACATTGCCATTTGTTCTTGATAGTTTTTTGCTTT 100457 Query 1579 TTCTAAAGCATTTTTATTCCAATCAGCTTTAACATGATCAACAGCATATTTTGCAGCATC 1638 || ||||||||| ||| ||||||| | | || ||||| |||||||| ||||| || Sbjct 100458 TTTTAAAGCATTAGCATTATAATCAGCCTGTAGATTATCAATAGCATATTGAGCAGCTTC 100517 Query 1639 TTCTGGGAATTTATCTCCAGATTTGGAAATTAGTTGATCATAAATTGCGGCCTTAGACAT 1698 | | | |||| || ||| | | || | |||||||||||||| | || |||||| Sbjct 100518 GGCAGAGTATTTTTCACCATACTCAGATGTAAGTTGATCATAAATGCCTGCTTTAGAC-- 100575 Query 1699 ATGCATATCGTTT 1711 ||| | ||||||| Sbjct 100576 ATGTACATCGTTT 100588 Score = 91.5 bits (100), Expect = 4e-14 Identities = 178/256 (70%), Gaps = 19/256 (7%) Strand=Plus/Plus Query 10429 CCATGGTTTGTTGGAAAAGATTTAGCAAATGTTCTTGGATATTCTAATACTCAAAAAGCG 10488 |||| ||||||||||||||| |||| |||||| | || ||||| ||||||| ||||| Sbjct 103002 CCATACTTTGTTGGAAAAGATGTAGCTAATGTTTTGGGCTATTCAAATACTCCTAAAGCA 103061 Query 10489 ATTAGAGATCACATTGATCCAGACGATTTAAG-GGGTGAACGAATCGTT-ACCCCCTCTG 10546 ||| | || || | || ||| || |||| | |||||||||||| ||| | || Sbjct 103062 ATTCGGGACCATGTAGACGAAGAAGA--TAAGACGCAGAACGAATCGTTCACCGTCAATG 103119 Query 10547 GAAAACAAATGACAATTATTACT----AATGAATCTGGAATGTACAGTTTAATTCTTTCT 10602 | |||| | ||||| || || |||||||| | ||||| | || || Sbjct 103120 G--AACAGCT-----TTATTGCTTATCAACGAATCTGGTTTATACAGCCTTAT--ATTAA 103170 Query 10603 AGT--AAATTGCCAAGCGCAAAGAAGTTTAAGCGTTGGGTAACAAGCGAAGTGCTTCCAG 10660 ||| ||| | || | ||||| | ||| || || |||||||| || ||||| ||||| Sbjct 103171 AGTCAAAACTTCCTAATGCAAAAAGGTTCAAACGATGGGTAACTAGTGAAGTACTTCCGT 103230 Query 10661 CAATTCGAGAAGATGG 10676 ||||| || || |||| Sbjct 103231 CAATTAGAAAACATGG 103246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128242147674816