Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_005859.1 Length=121750 Score E Sequences producing significant alignments: (Bits) Value seq1361 89.7 4e-13 >seq1361 Length=62553 Score = 89.7 bits (98), Expect = 4e-13 Identities = 244/374 (65%), Gaps = 0/374 (0%) Strand=Plus/Plus Query 54505 AAAAAGAAGTCTATGATGCTTGTCAGGGTCTAGAGTATGAGATCAATACGATGTTCAACT 54564 ||||||| | | |||||| || || | || |||||||||||||| | |||| | Sbjct 32505 AAAAAGATATTTTTGATGCCATGCAAAGTTTGGAATATGAGATCAATACACTTTTCACTT 32564 Query 54565 CTAATGGTCAGAGTCCATTTATTACTTTTGGTTTTGGTCTAGGAACTTCTTGGGAAGCAC 54624 | || || || | || |||| | | | || || |||||||| | |||| | || Sbjct 32565 CCAACGGACAAACGCCTTTTACTTCACTCGGCTTCGGTCTAGGTAAAAATTGGTTTGAAC 32624 Query 54625 GTCTAATACAGAAAGCAATACTGAAAGTACGTATGGATGGCTTAGGCATCAATAAACGTA 54684 | ||| || ||||| || | || | || || |||| ||||||| | ||||| | Sbjct 32625 GAGAAATCCAAAAAGCGATTTTACAAATCCGAATCAATGGATTAGGCAGTGAGAAACGGA 32684 Query 54685 CAGCTATCTTTCCGAAACTGGTGTTTGTTCTGCGTGATGGCGTAAATATGAAGCCTGGAG 54744 |||| ||||| || ||| || | ||| || || || | ||| | || || | Sbjct 32685 CAGCGATCTTCCCAAAATTGATATTTACACTAAAAGACGGAATCAATCTTAAACCAACTG 32744 Query 54745 ATGTTAATTATGACATCAAGAAGTTAGCTATGAAATGTACTGCTGAACGTATGTATCCAG 54804 || || ||||||||||| | ||||| | ||||| | | || | ||||| |||| Sbjct 32745 ATCCAAACTATGACATCAAACAATTAGCCTTAGAATGTGCCACAAAAAGAATGTACCCAG 32804 Query 54805 ACTATATCAGCTATGATAAGGTTGTGGAAGTTACTGGTGACTATAAAGTTTCTATGGGCT 54864 | | | | ||||| ||| | || ||| | || || || ||||| | ||||||| Sbjct 32805 ATATTCTAAATTATGACAAGATCGTTGAATTGACAGGAAGCTTCAAAGTACCAATGGGCT 32864 Query 54865 GCCGTTCATTCTTA 54878 | || || |||||| Sbjct 32865 GTCGCTCCTTCTTA 32878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 388715324634764