Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq2007 87.8 2e-12 seq42908 82.4 9e-11 >seq2007 Length=108395 Score = 87.8 bits (96), Expect = 2e-12 Identities = 167/243 (69%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 6802 CGAGTTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGC 6861 |||| ||||||||||| || ||||| |||| | | |||| ||| ||||| |||| Sbjct 94863 CGAGACAATTGTTCTTTCATTTGTTTTACGTGATTTGAGTAAAGATGCGCATCGCCTAAA 94804 Query 6862 GTATGAATAAATTCACCTGGTTTCATATCAACAG---CTTGAGCAATTAAATATGTTAAT 6918 ||||| ||||||||||| ||| ||| | | | || ||||| | || ||| ||| Sbjct 94803 GTATGGATAAATTCACC-AACTTCTAATC--CCGTTTCATGTGCAATCAGATGTGTCAAT 94747 Query 6919 AATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAA 6978 || ||||| ||| | ||| || || |||||||| || || || ||||||||| Sbjct 94746 AAAGCATAGCTAGCAATATTGAACGGGACACCTAAAAACACGTCAGCACTTCTTTGATAC 94687 Query 6979 CATTGACAAGATAAAATATTGTCTATAGCATAAAATTGACACAATACATGACATGGAGGT 7038 || ||| || ||||||| | |||| |||||| ||| || || |||||| Sbjct 94686 AGCTGGCAACTTAGTTTATTGTCATTTACATAGAATTGAAACATCGTGTGGCAAGGAGGT 94627 Query 7039 AAA 7041 ||| Sbjct 94626 AAA 94624 >seq42908 Length=20619 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 7118 TTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATAT 7177 |||| || |||||| |||||| || || || ||| |||||| ||| | || | || Sbjct 14689 TTATTATGTTTTGTATTTGATCAATTCCTTGTCCTGCATAATCAGTTTTCGCATCAACAT 14748 Query 7178 AATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 | | ||||||| ||||||||||||||| ||||||| ||| || | ||||||| Sbjct 14749 ATTGAGCTCCACTATGTCTCCATTGAAAGCCATAAACAGGTCCAAGATCACCT 14801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594679630334400