Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq45075 129 3e-25 seq35739 129 3e-25 seq28015 129 3e-25 seq54170 125 4e-24 seq146797 123 1e-23 seq11614 123 1e-23 seq37529 122 5e-23 seq14719 120 2e-22 seq14232 120 2e-22 seq29863 118 6e-22 seq41752 116 2e-21 seq25066 114 7e-21 seq75000 113 2e-20 seq39352 89.7 3e-13 >seq45075 Length=6034 Score = 129 bits (142), Expect = 3e-25 Identities = 89/101 (88%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 ||||||| | ||| |||||||| ||||||||||| |||||||||| ||||||||| Sbjct 4755 AAATATATAGTTATTAAAAAAT----TTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 4700 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||||||||| Sbjct 4699 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 4659 Score = 122 bits (134), Expect = 5e-23 Identities = 89/102 (87%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATA-AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487 |||| ||||| || | |||||| | ||||||||||| |||||||||| |||||||| Sbjct 5309 AAATTTAGAAAAAAAATAAAAAT--ATTTGGCCCATGAGGGGATCGAACCCGCGACCTTC 5252 Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||| |||||||||||||||||||| Sbjct 5251 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 5210 >seq35739 Length=9572 Score = 129 bits (142), Expect = 3e-25 Identities = 87/97 (90%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 11435 AGAATTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 |||| |||||||||| || ||||||||||| |||||||||| |||||||||||||| Sbjct 760 AGAAAAAATAAAAAATATAACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTA 819 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||| ||||||||||||||||||||| Sbjct 820 TTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 856 >seq28015 Length=7947 Score = 129 bits (142), Expect = 3e-25 Identities = 87/97 (90%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||||||| |||| ||| ||||||||||| |||||||||| ||||||||||||||| Sbjct 3780 AATTAATATAAAAGAAAAGTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTAT 3839 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||||| |||||||||||||||||||||| Sbjct 3840 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 3876 Score = 127 bits (140), Expect = 1e-24 Identities = 87/98 (89%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 11434 TAGAATTAATAAAAAA--TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491 || ||||||| ||||| | | |||||||||||| |||||||||| |||||||||||| Sbjct 6881 TACAATTAATTAAAAAGATAACATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGT 6822 Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||| |||||||||||||||||||| Sbjct 6821 TATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 6784 Score = 123 bits (136), Expect = 1e-23 Identities = 81/89 (91%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 11442 ATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||| || | |||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 601 ATAAAAAGATAACATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 660 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 661 GACGCTCTAACCAACTGAGCTAATGGGCC 689 Score = 123 bits (136), Expect = 1e-23 Identities = 85/97 (88%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||||| | |||| | ||||||||||| |||||||||| ||||||||||||||||| Sbjct 5475 AATTAAAATAAAAAGATCTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 5416 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 |||||||||||| ||||||||||||||||||||| || Sbjct 5415 GCACGACGCTCTAACCAACTGAGCTAATGGGCCGACG 5379 >seq54170 Length=684 Score = 125 bits (138), Expect = 4e-24 Identities = 91/105 (87%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 11429 AAATATAGAATTAAT--AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486 |||| | |||||| ||||||| | ||||||||||| |||||||||| ||||||| Sbjct 294 AAATTCAAAATTAAATAAAAAAATTGATTTGGCCCATGAGGGGATCGAACCCGCGACCTT 235 Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||||||||||||| |||||||||||||||||||||| Sbjct 234 CGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 190 >seq146797 Length=651 Score = 123 bits (136), Expect = 1e-23 Identities = 79/87 (91%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| |||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 247 TAAAAAATTTGATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 188 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 187 CGCTCTAACCAACTGAGCTAATGGGCC 161 >seq11614 Length=11102 Score = 123 bits (136), Expect = 1e-23 Identities = 83/91 (91%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 11441 AATA-AAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||| |||||| ||| ||||||||||| |||||||||| ||||||||||||||||||| Sbjct 1945 AATATAAAAATGAAACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 1886 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 1885 ACGACGCTCTAACCAACTGAGCTAATGGGCC 1855 >seq37529 Length=6513 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| || ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 6157 AAAAAAGAAATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 6216 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 6217 GCTCTAACCAACTGAGCTAATGGGCC 6242 >seq14719 Length=6116 Score = 120 bits (132), Expect = 2e-22 Identities = 86/100 (86%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 11430 AATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489 |||| | || || ||| || | |||||||||||| |||||||||| |||||||||| Sbjct 3069 AATAAATAAGTACAAAACAAATAGATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGC 3128 Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||| |||||||||||||||||||| Sbjct 3129 GTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 3168 >seq14232 Length=2588 Score = 120 bits (132), Expect = 2e-22 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 || ||||||| || |||||||||| |||||||||| |||||||||||||||||||| Sbjct 2499 TAGTAAAAAACAAAGATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 2558 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 2559 CGACGCTCTAACCAACTGAGCTAATGGGCC 2588 >seq29863 Length=2824 Score = 118 bits (130), Expect = 6e-22 Identities = 78/86 (91%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 11446 AAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | | |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 2664 AAAATCTATTCTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 2605 Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530 |||| ||||||||||||||||||||| Sbjct 2604 CTCTAACCAACTGAGCTAATGGGCCG 2579 >seq41752 Length=1872 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1872 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1813 Query 11516 TGAGCTAATGGGCCGT 11531 |||||||||||||||| Sbjct 1812 TGAGCTAATGGGCCGT 1797 >seq25066 Length=6530 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2654 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 2713 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 2714 TGAGCTAATGGGCCG 2728 >seq75000 Length=8682 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 3509 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 3450 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 3449 TGAGCTAATGGGCC 3436 >seq39352 Length=4213 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||| |||||||| | |||||||| |||||||||||||||||| Sbjct 1363 GGATCGAACCCGCGACCTTCGTGTTATTAGTAAGACGCTCTAACCAACTGAGCTAATGGG 1422 Query 11528 CCG 11530 ||| Sbjct 1423 CCG 1425 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260981024458384