Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_006565.1 Length=131522 Score E Sequences producing significant alignments: (Bits) Value seq1065 201 9e-47 seq14859 113 4e-20 >seq1065 Length=16866 Score = 201 bits (222), Expect = 9e-47 Identities = 464/683 (68%), Gaps = 17/683 (2%) Strand=Plus/Plus Query 106491 AATTATTTTAAGTGGTTAATCAATCAGATTAAGGGTTGGCCCCAACAAAACTATTATTTA 106550 |||||||| | | || || |||| | || |||||||| |||||||| |||||| || Sbjct 3483 AATTATTTCAGATTTTTGATTCATCAATTGAAAGGTTGGCCTCAACAAAATTATTATCTA 3542 Query 106551 TTCTGGTTTGCTATGGGAGCCCAAATCATGACGTTGGTTAGTGCTCCTATTACACCGCTA 106610 |||| ||| | || |||| ||||||| | || | | || || || | || Sbjct 3543 TTCTATTTTAGCCTAGGTTGCCAAGTCATGACACTTGTGAATCAGCCAATCACTTGGTTA 3602 Query 106611 ACTTTATTAACATTTATTGGTACAACCCTTGGGGTGCTTTGCGTGCTTAGCA-TAAATGC 106669 | | | || ||||| || |||| || |||||| | || | ||| || | ||||| Sbjct 3603 TCGATCATTACCTTTATCGGGACAAATCTAGGGGTGTTATGTATT-TTATCAATCAATGC 3661 Query 106670 AGCATCCTCAGTAAATGGCATCCTAGGGCTAATCTCAGCTGCGATTTTCATCTATGTTGG 106729 || ||||| || || || ||||| | |||| ||| ||| ||| ||||| Sbjct 3662 CGCTAAATCAGTCAACGGTATTCTAGGAATTCTCTCTGCTATTTGTTTTATCGTCGTTGG 3721 Query 106730 GTTTAAGGCTAAGAATTATTTGAGCATTGGCGAACAGACAGCTTACGTTCTGACTTTGGA 106789 ||| || || || ||||| || || |||||||| | ||||| | | || ||||| Sbjct 3722 CTTTTCTGCCAAAAACTATTTAAGTATCGGCGAACAAATTGCTTATATGGTCACATTGGA 3781 Query 106790 TCTTCCAGTATTGCTAGCAGTTAAGACGTGGAACTCAGAAACTA--TTC-ACAATCTGAG 106846 | | ||||| || || ||| |||| ||||| ||| || | ||| | ||| ||| Sbjct 3782 TATCCCAGTTTTATTA--AGTAAAGAA-TGGAA-TCATAATATGGCTTCTAAAATTCGAG 3837 Query 106847 AAAATTTGGAGCTAAGGAATGGGTTATTTCCATCTTA--GGAACAATTGCTGTATACGCT 106904 || ||| | | || | | |||| || ||| | | || || || || ||| Sbjct 3838 AA--TTTAGTGGAAAA-AGTTGGTTGATTGCAT-TAACCGGGACTGTTTTCGTTTACTTG 3893 Query 106905 ATTTCTGGCTATTTGATTGGCGCGCTAACTGATGACCCTCGGCCTTGGATTGATGCGATT 106964 ||||| || ||||||||||| || || || |||||||| |||||||| ||||| ||| Sbjct 3894 ATTTCAGGTTATTTGATTGGTACGTATACAGACGACCCTCGTCCTTGGATCGATGCCATT 3953 Query 106965 GCATTTTCAATTAGTTTAACTGCTGGTATTATGTGCTTTATGCGGTATAATAACCAATAT 107024 || ||||| || ||| | |||| || || || |||| | || || || || || ||| Sbjct 3954 GCTTTTTCGATCAGTCTTTCTGCCGGCATCATTAGCTTCCTTCGCTACAACAATCAGTAT 4013 Query 107025 TACTGGTGGGTGGCAAGTGGCTTAGCACAAATGGTATTGTGGTATGTCTCCTTCAAGCAA 107084 || |||||| | || ||| | ||||||||||| || |||||||| |||| | || Sbjct 4014 TATTGGTGGCTTGCTTCTGGTCTTGCACAAATGGTCTTATGGTATGTTTCCTATACCCAT 4073 Query 107085 GGAAGTGCCACACTAGCAATGTTTATTAATAGTTCTGTTTATCTTGCT-AATGATGTATT 107143 || ||| | |||| |||||||| ||||| |||||||| |||| | ||||| |||| Sbjct 4074 GGGTCTGCTAGTTTAGCTATGTTTATCAATAGCTCTGTTTA-CTTGATCAATGACTTATT 4132 Query 107144 AGCATTCACCGTTTCTCCATGGT 107166 ||| || || || ||||| |||| Sbjct 4133 AGCCTTTACTGTCTCTCCTTGGT 4155 >seq14859 Length=68005 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 50478 TTTTCAAACTTCTTATAGGCATCAAAATATAATTCCTCTTTATCGCCATTATAGGTCAGT 50537 ||||| | || ||||| ||||||||||| | ||| ||| || || ||||| || | Sbjct 25694 TTTTCCCATTTTTTATATGCATCAAAATAGATTTCTGATTTGTCTCCGTTATACGTTAAC 25635 Query 50538 TCATAGTACATTCCATCTGACACTGTTGTGCTTAACAATGCCTTGTGGTTTTGGAGTGTC 50597 ||||||||||| || |||| || | || ||||| || ||||| | ||||| | |||| Sbjct 25634 TCATAGTACATACCGTCTGCAACATTAGTACTTAATAAAGCCTTATTATTTTGTAATGTC 25575 Query 50598 TTACTATACCAAACTACGAATACGTCA-TCGTTGCTTATTTGAGTGTTATCTGTTTTATC 50656 |||| | ||| || || || |||||| |||||| | || || | | ||||||||| || Sbjct 25574 TTACAAGTCCAGACCACAAAAACGTCATTCGTTG-TAATCTGCATTTGATCTGTTTTGTC 25516 Query 50657 CATATGTTCATTAGTATAGTCTCTTACTAATTTAGTACATTTTTCAACAAA 50707 | | |||||| ||| || ||||| || ||||||| ||| ||| Sbjct 25515 AAAGTTTTCATTGACATAATCAGCTACTAGTTGTTTACATTTAGCAATAAA 25465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419924715341692