Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq125115 145 1e-30 seq39883 131 3e-26 seq172 127 3e-25 >seq125115 Length=554 Score = 145 bits (160), Expect = 1e-30 Identities = 193/268 (72%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||||| | || || |||||||||||||| ||||| ||||| ||||| Sbjct 262 CGCCAAGCGTCATCGCAAAGTGCTGCGTGATAACATCCAAGGTATCACGAAGCCTGCTAT 321 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||| |||| ||||| || || || ||||| | |||||| | | || || || | Sbjct 322 CCGCCGTTTGGCCCGTCGAGGCGGTGTGAAGCGCATATCTGGACTCATATACGAGGAAAC 381 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| ||||| | ||| | ||| ||| || | |||||| | ||| || || Sbjct 382 GCGTGGCGTTCTGAAGGTTTTCTTGGAGAACGTAATTCGTGATGCCGTGACCTACACGGA 441 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| || || |||||||| | || || || |||| | ||||| Sbjct 442 ACACGCCAAGAGGAAGACAGTTACAGCCATGGATGTTGTGTACGCTCTGAAGAGGCAAGG 501 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || || ||||| ||||| Sbjct 502 CCGCACCCTCTACGGATTTGGCGGTTAA 529 >seq39883 Length=4815 Score = 131 bits (144), Expect = 3e-26 Identities = 186/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| || ||| | | | || | || ||||||||||| |||||||| |||||||| Sbjct 434 CGCTAAACGCCATAGAAAAGTACTCAGGGACAACATCCAAGGCATCACCAAACCAGCTAT 375 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || | ||||| ||||| ||||| | || || || | || ||||| | Sbjct 374 AAGAAGATTAGCAAGACGTGGCGGAGTTAAGCGCATTTCCGGTTTAATTTACGAAGAAAC 315 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||||||||||| || || | | || || ||||| | ||||| || Sbjct 314 GCGCGGAGTTTTGAAGATTTTTCTAGAAAATGTCATTAGAGATGCCGTAACTTATACTGA 255 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| ||| |||||||| | || || ||||||||| | ||||| Sbjct 254 ACACGCTAAAAGGAAGACTGTTACCGCCATGGATGTGGTTTACGCATTGAAAAGACAAGG 195 Query 16672 CCGTAAGATTTATGGTTTTGGA 16693 ||| | | | ||||| |||||| Sbjct 194 CCGCACGTTGTATGGATTTGGA 173 >seq172 Length=6210 Score = 127 bits (140), Expect = 3e-25 Identities = 193/275 (70%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| | | | || || ||||||||||| || ||||| ||||| || ||| Sbjct 2522 GCGAAGCGTCACAGGAAAGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCGGCCATC 2581 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || || | || || ||||| ||| | || || || | || || |||| | Sbjct 2582 CGTCGTCTCGCCCGCAGAGGCGGCGTCAAACGTATATCCGGCCTGATATACGAGGAGACT 2641 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | |||||| ||| || |||| || || || || || ||| Sbjct 2642 CGCGGAGTGCTGAAGGTGTTCCTCGAGAATGTGATCCGCGACGCCGTCACGTACACGGAG 2701 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| |||||| ||||||| |||| || || |||| || || || Sbjct 2702 CACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGGCAGGGG 2761 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAA 16707 || | | || || || || |||||| || ||| Sbjct 2762 CGCACTCTGTACGGCTTCGGCGGTTAATATTTTAA 2796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78928834078212