Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq125115 145 1e-30
seq39883 131 3e-26
seq172 127 3e-25
>seq125115
Length=554
Score = 145 bits (160), Expect = 1e-30
Identities = 193/268 (72%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||||||||||| | || || |||||||||||||| ||||| ||||| |||||
Sbjct 262 CGCCAAGCGTCATCGCAAAGTGCTGCGTGATAACATCCAAGGTATCACGAAGCCTGCTAT 321
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||| |||| ||||| || || || ||||| | |||||| | | || || || |
Sbjct 322 CCGCCGTTTGGCCCGTCGAGGCGGTGTGAAGCGCATATCTGGACTCATATACGAGGAAAC 381
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| ||||| | ||| | ||| ||| || | |||||| | ||| || ||
Sbjct 382 GCGTGGCGTTCTGAAGGTTTTCTTGGAGAACGTAATTCGTGATGCCGTGACCTACACGGA 441
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | ||||| || || |||||||| | || || || |||| | |||||
Sbjct 442 ACACGCCAAGAGGAAGACAGTTACAGCCATGGATGTTGTGTACGCTCTGAAGAGGCAAGG 501
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || ||||| |||||
Sbjct 502 CCGCACCCTCTACGGATTTGGCGGTTAA 529
>seq39883
Length=4815
Score = 131 bits (144), Expect = 3e-26
Identities = 186/262 (71%), Gaps = 0/262 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||| || ||| | | | || | || ||||||||||| |||||||| ||||||||
Sbjct 434 CGCTAAACGCCATAGAAAAGTACTCAGGGACAACATCCAAGGCATCACCAAACCAGCTAT 375
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | || | ||||| ||||| ||||| | || || || | || ||||| |
Sbjct 374 AAGAAGATTAGCAAGACGTGGCGGAGTTAAGCGCATTTCCGGTTTAATTTACGAAGAAAC 315
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||||||||||| || || | | || || ||||| | ||||| ||
Sbjct 314 GCGCGGAGTTTTGAAGATTTTTCTAGAAAATGTCATTAGAGATGCCGTAACTTATACTGA 255
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| | |||||||| ||| |||||||| | || || ||||||||| | |||||
Sbjct 254 ACACGCTAAAAGGAAGACTGTTACCGCCATGGATGTGGTTTACGCATTGAAAAGACAAGG 195
Query 16672 CCGTAAGATTTATGGTTTTGGA 16693
||| | | | ||||| ||||||
Sbjct 194 CCGCACGTTGTATGGATTTGGA 173
>seq172
Length=6210
Score = 127 bits (140), Expect = 3e-25
Identities = 193/275 (70%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| | | | || || ||||||||||| || ||||| ||||| || |||
Sbjct 2522 GCGAAGCGTCACAGGAAAGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCGGCCATC 2581
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||| || || | || || ||||| ||| | || || || | || || |||| |
Sbjct 2582 CGTCGTCTCGCCCGCAGAGGCGGCGTCAAACGTATATCCGGCCTGATATACGAGGAGACT 2641
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || ||||| | |||||| ||| || |||| || || || || || |||
Sbjct 2642 CGCGGAGTGCTGAAGGTGTTCCTCGAGAATGTGATCCGCGACGCCGTCACGTACACGGAG 2701
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || | ||||| |||||| ||||||| |||| || || |||| || || ||
Sbjct 2702 CACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGGCAGGGG 2761
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAA 16707
|| | | || || || || |||||| || |||
Sbjct 2762 CGCACTCTGTACGGCTTCGGCGGTTAATATTTTAA 2796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 78928834078212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |