Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq102 118 2e-22
>seq102
Length=4617
Score = 118 bits (130), Expect = 2e-22
Identities = 346/524 (66%), Gaps = 22/524 (4%)
Strand=Plus/Plus
Query 4474 AAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTA-GGTTT--- 4529
||||| || |||||||| || |||| |||| | |||||| ||| || |||||
Sbjct 3435 AAAAAAAAATATGTTATACATTATAGAAATCTTTTGCAATGTG-AGAAATATGGTTTGCG 3493
Query 4530 AGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATA 4589
||| | | ||| | || ||| || ||||| ||||| | ||| | ||| |||
Sbjct 3494 AGTAC---AAAAAGTTCATAGAGTATTAAAATTCAAGCAAAAACCTTGGTTAAAAAAATA 3550
Query 4590 TATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTA 4649
||| || ||| || || |||| |||| | || || |||||| | |||||
Sbjct 3551 TATTGAATTAAACACTCAATTACGAACTTTAGCAACATCCGACTTTGAAAAAGATTTTTA 3610
Query 4650 TAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAA-AG 4708
||| | ||||||||| | || ||||||||||| ||||| ||| | |||||| | | |
Sbjct 3611 TAAGCTGATGAATAATTCTGTATTTGGAAAGACAATGGAAAATAT-CGAAAAAAGAGTAA 3669
Query 4709 ATATATATTTAAGAACAAAGTGGCAAAGTCA-------ATACAATGTATCG-GATTTAGT 4760
| | | ||| |||| | ||| ||| ||| || || || | | || |
Sbjct 3670 ACGTGAAATTATTAACACATTGGGAAAATCATGGAAAAATCAAAGGTGTTGAGAGTCTCA 3729
Query 4761 ATG-TAGACCAAACTTCCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTGAAC 4819
|| | | || | |||||||| ||| | |||||| ||| || |||| ||| |||
Sbjct 3730 TTGCTCGCCCCGAATTCCACAGTCTTTCCATTTTTTCTGAAAATTTGGTCGCAGTCCAAC 3789
Query 4820 TTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAGATT 4879
|| ||| ||| | | | | || ||||| || ||| |||| ||||| ||||||||
Sbjct 3790 TTCGCAAAACTAAATTGTTTTATAATAAGCCCATATATTTAGGTTTTAGCATATTAGAGA 3849
Query 4880 TATCTAAAATTTATATTTATGACTTTCATTACAATTATGTTATGCAAAATTATGTAAATA 4939
|||| || | || || ||||||||||| || | || ||| ||||| | | | |
Sbjct 3850 TATCCAAGACTTTAATGTATGACTTTCACTATCAGTA---CATGAAAAATAAATTTACCA 3906
Query 4940 CCTCAAAATTATTGTACACTGACACAGATAGTCTAATTTACCAA 4983
| |||||| || || ||||| || |||||||| || ||||||
Sbjct 3907 ACATAAAATTGTTATATACTGATACTGATAGTCTGATATACCAA 3950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97788150910536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |