Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq102 118 2e-22 >seq102 Length=4617 Score = 118 bits (130), Expect = 2e-22 Identities = 346/524 (66%), Gaps = 22/524 (4%) Strand=Plus/Plus Query 4474 AAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTA-GGTTT--- 4529 ||||| || |||||||| || |||| |||| | |||||| ||| || ||||| Sbjct 3435 AAAAAAAAATATGTTATACATTATAGAAATCTTTTGCAATGTG-AGAAATATGGTTTGCG 3493 Query 4530 AGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATA 4589 ||| | | ||| | || ||| || ||||| ||||| | ||| | ||| ||| Sbjct 3494 AGTAC---AAAAAGTTCATAGAGTATTAAAATTCAAGCAAAAACCTTGGTTAAAAAAATA 3550 Query 4590 TATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTA 4649 ||| || ||| || || |||| |||| | || || |||||| | ||||| Sbjct 3551 TATTGAATTAAACACTCAATTACGAACTTTAGCAACATCCGACTTTGAAAAAGATTTTTA 3610 Query 4650 TAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAA-AG 4708 ||| | ||||||||| | || ||||||||||| ||||| ||| | |||||| | | | Sbjct 3611 TAAGCTGATGAATAATTCTGTATTTGGAAAGACAATGGAAAATAT-CGAAAAAAGAGTAA 3669 Query 4709 ATATATATTTAAGAACAAAGTGGCAAAGTCA-------ATACAATGTATCG-GATTTAGT 4760 | | | ||| |||| | ||| ||| ||| || || || | | || | Sbjct 3670 ACGTGAAATTATTAACACATTGGGAAAATCATGGAAAAATCAAAGGTGTTGAGAGTCTCA 3729 Query 4761 ATG-TAGACCAAACTTCCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTGAAC 4819 || | | || | |||||||| ||| | |||||| ||| || |||| ||| ||| Sbjct 3730 TTGCTCGCCCCGAATTCCACAGTCTTTCCATTTTTTCTGAAAATTTGGTCGCAGTCCAAC 3789 Query 4820 TTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAGATT 4879 || ||| ||| | | | | || ||||| || ||| |||| ||||| |||||||| Sbjct 3790 TTCGCAAAACTAAATTGTTTTATAATAAGCCCATATATTTAGGTTTTAGCATATTAGAGA 3849 Query 4880 TATCTAAAATTTATATTTATGACTTTCATTACAATTATGTTATGCAAAATTATGTAAATA 4939 |||| || | || || ||||||||||| || | || ||| ||||| | | | | Sbjct 3850 TATCCAAGACTTTAATGTATGACTTTCACTATCAGTA---CATGAAAAATAAATTTACCA 3906 Query 4940 CCTCAAAATTATTGTACACTGACACAGATAGTCTAATTTACCAA 4983 | |||||| || || ||||| || |||||||| || |||||| Sbjct 3907 ACATAAAATTGTTATATACTGATACTGATAGTCTGATATACCAA 3950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97788150910536